prot_M-pyrifera_M_contig12171.4461.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12171.4461.1
Unique Nameprot_M-pyrifera_M_contig12171.4461.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length103
Homology
BLAST of mRNA_M-pyrifera_M_contig12171.4461.1 vs. uniprot
Match: D7FJC7_ECTSI (Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC7_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 5.470e-62
Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 0
Query:    1 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQFEEAHQYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEKKSGCC 102
            ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQ EEA  YAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTE+KSGCC
Sbjct:   94 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 195          
BLAST of mRNA_M-pyrifera_M_contig12171.4461.1 vs. uniprot
Match: A0A835Z7I1_9STRA (Rab5, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I1_9STRA)

HSP 1 Score: 172 bits (437), Expect = 7.030e-53
Identity = 85/102 (83.33%), Postives = 93/102 (91.18%), Query Frame = 0
Query:    1 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQFEEAHQYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEKKSGCC 102
            +SFNGAKSWVKELQRRGDPNV+IALAGNKADLE RRQV FEEAH YAE+NG+IHMETSAKSA NVKSIFVEIA++LPKA  QPEREAFPIM PR +KK+G C
Sbjct:   92 DSFNGAKSWVKELQRRGDPNVVIALAGNKADLEGRRQVHFEEAHAYAEENGIIHMETSAKSALNVKSIFVEIAKRLPKAGAQPEREAFPIMPPRRDKKAGGC 193          
BLAST of mRNA_M-pyrifera_M_contig12171.4461.1 vs. uniprot
Match: A0A484DXE7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXE7_BRELC)

HSP 1 Score: 159 bits (402), Expect = 3.430e-48
Identity = 77/103 (74.76%), Postives = 90/103 (87.38%), Query Frame = 0
Query:    1 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQFEEAHQYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEK-KSGCC 102
            +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V++EEAHQYAEDN ++HMETSAK+A NVK +FV IA++LPK  +QPEREAFPI  P+  K KSGCC
Sbjct:   45 DSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEYEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPIQPEREAFPITPPQASKSKSGCC 147          
BLAST of mRNA_M-pyrifera_M_contig12171.4461.1 vs. uniprot
Match: A0A7S0CFN9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CFN9_9STRA)

HSP 1 Score: 157 bits (397), Expect = 8.260e-48
Identity = 74/101 (73.27%), Postives = 91/101 (90.10%), Query Frame = 0
Query:    1 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQFEEAHQYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEKKSGC 101
            +SF GAKSWVKELQRRGDPNV+IALAGNKADL+ RR+V+FEEA+ YAE+NG++H+ETSAK++ NVKS+FVEIAQKLPK   QPEREAFP+M P+ EK++ C
Sbjct:   19 DSFAGAKSWVKELQRRGDPNVVIALAGNKADLDSRRKVEFEEANAYAEENGILHLETSAKNSNNVKSLFVEIAQKLPKNPPQPEREAFPLMAPKQEKRACC 119          
BLAST of mRNA_M-pyrifera_M_contig12171.4461.1 vs. uniprot
Match: A0A662WWK7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWK7_9STRA)

HSP 1 Score: 158 bits (399), Expect = 2.060e-47
Identity = 78/103 (75.73%), Postives = 89/103 (86.41%), Query Frame = 0
Query:    1 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQFEEAHQYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEK-KSGCC 102
            +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+FEEAHQYAEDN ++HMETSAK+A NVK +FV IA++LPK   QPEREAFPI  P+  K KSGCC
Sbjct:   69 DSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPPQPEREAFPITPPQAAKSKSGCC 171          
BLAST of mRNA_M-pyrifera_M_contig12171.4461.1 vs. uniprot
Match: A0A6U2XTP3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U2XTP3_9STRA)

HSP 1 Score: 158 bits (399), Expect = 4.960e-47
Identity = 76/102 (74.51%), Postives = 92/102 (90.20%), Query Frame = 0
Query:    1 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQFEEAHQYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEKKSGCC 102
            +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+FEEA+ YA +NGL+H+ETSAK+A NVKS+FVEIA+KLPK   +PEREAFPI+ P+T++KS CC
Sbjct:  100 DSFTGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYATENGLLHLETSAKNANNVKSLFVEIAKKLPKQEPEPEREAFPIL-PQTQEKSNCC 200          
BLAST of mRNA_M-pyrifera_M_contig12171.4461.1 vs. uniprot
Match: A0A5D6XMY9_9STRA (Uncharacterized protein n=23 Tax=Oomycota TaxID=4762 RepID=A0A5D6XMY9_9STRA)

HSP 1 Score: 157 bits (398), Expect = 6.630e-47
Identity = 78/104 (75.00%), Postives = 89/104 (85.58%), Query Frame = 0
Query:    1 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQFEEAHQYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEK--KSGCC 102
            +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+FEEAHQYAEDN ++HMETSAK+A NVK +FV IA++LPK   QPEREAFPI  P  +K  KSGCC
Sbjct:   95 DSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPHQPEREAFPITPPTNQKQNKSGCC 198          
BLAST of mRNA_M-pyrifera_M_contig12171.4461.1 vs. uniprot
Match: M4B2C3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2C3_HYAAE)

HSP 1 Score: 162 bits (409), Expect = 7.870e-47
Identity = 79/103 (76.70%), Postives = 91/103 (88.35%), Query Frame = 0
Query:    1 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQFEEAHQYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEK-KSGCC 102
            ESF+GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+FEEAHQYAEDN ++HMETSAK+A NVK +FV IA++LPK  +QPEREAFPI  P+  K KSGCC
Sbjct:  244 ESFSGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPIQPEREAFPITPPQASKSKSGCC 346          
BLAST of mRNA_M-pyrifera_M_contig12171.4461.1 vs. uniprot
Match: A0A0W8DMJ6_PHYNI (Intraflagellar Transport protein 80 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DMJ6_PHYNI)

HSP 1 Score: 158 bits (400), Expect = 1.610e-46
Identity = 78/103 (75.73%), Postives = 89/103 (86.41%), Query Frame = 0
Query:    1 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQFEEAHQYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEK-KSGCC 102
            +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+FEEAHQYAEDN ++HMETSAK+A NVK +FV IA++LPK   QPEREAFPI  P+  K KSGCC
Sbjct:  151 DSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPPQPEREAFPITPPQASKSKSGCC 253          
BLAST of mRNA_M-pyrifera_M_contig12171.4461.1 vs. uniprot
Match: A0A7S1ZIQ9_TRICV (Hypothetical protein n=3 Tax=Mediophyceae TaxID=589449 RepID=A0A7S1ZIQ9_TRICV)

HSP 1 Score: 156 bits (394), Expect = 8.080e-46
Identity = 74/101 (73.27%), Postives = 90/101 (89.11%), Query Frame = 0
Query:    1 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQFEEAHQYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEKKSGC 101
            +SF GAKSWVKELQRRGDPNV+IALAGNKADLE RR+V+FEEA+ YAE+NG++H+ETSAK+A NVK++FVEIA+KLPK   QPEREAFPI+ P+ E +S C
Sbjct:  136 DSFAGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYAEENGILHLETSAKNASNVKALFVEIAKKLPKTPPQPEREAFPIVTPKQENRSCC 236          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12171.4461.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJC7_ECTSI5.470e-6296.08Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7I1_9STRA7.030e-5383.33Rab5, rab family GTPase n=1 Tax=Tribonema minus Ta... [more]
A0A484DXE7_BRELC3.430e-4874.76Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S0CFN9_9STRA8.260e-4873.27Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A662WWK7_9STRA2.060e-4775.73Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A6U2XTP3_9STRA4.960e-4774.51Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A5D6XMY9_9STRA6.630e-4775.00Uncharacterized protein n=23 Tax=Oomycota TaxID=47... [more]
M4B2C3_HYAAE7.870e-4776.70Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A0W8DMJ6_PHYNI1.610e-4675.73Intraflagellar Transport protein 80 n=1 Tax=Phytop... [more]
A0A7S1ZIQ9_TRICV8.080e-4673.27Hypothetical protein n=3 Tax=Mediophyceae TaxID=58... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 54..76
score: 37.28
coord: 19..32
score: 51.08
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..79
e-value: 4.5E-9
score: 3.5
NoneNo IPR availableGENE3D3.40.50.300coord: 1..102
e-value: 1.3E-22
score: 82.0
NoneNo IPR availablePANTHERPTHR24073:SF1001coord: 1..90
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..90
NoneNo IPR availablePROSITEPS51419RABcoord: 1..102
score: 14.541
IPR001806Small GTPasePFAMPF00071Rascoord: 1..76
e-value: 9.5E-20
score: 70.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12171contigM-pyrifera_M_contig12171:174..5542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12171.4461.1mRNA_M-pyrifera_M_contig12171.4461.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12171 174..5542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12171.4461.1 ID=prot_M-pyrifera_M_contig12171.4461.1|Name=mRNA_M-pyrifera_M_contig12171.4461.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQFEEAHQYAEDN
GLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEKKSG
CC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase