prot_M-pyrifera_M_contig121452.4417.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig121452.4417.1
Unique Name	prot_M-pyrifera_M_contig121452.4417.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	104

Homology

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BLAST of mRNA_M-pyrifera_M_contig121452.4417.1 vs. uniprot
Match: A0A482R764_9ARCH (PX domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482R764_9ARCH)

HSP 1 Score: 51.2 bits (121), Expect = 1.340e-5
Identity = 35/91 (38.46%), Postives = 50/91 (54.95%), Query Frame = 0

Query:    2 VAYLVRVKTVVRTWIVQRRYREFAALYRCLCSALPADEVPHLPTPSEMRAFRGGM---VSEQRRLALQTWLGMVVRRKEMWECDDLCLFLD 89
            V Y + V+    +WIV+RR+++FAAL+  L S LP D VP LP P +MR  +        E RR  L+ +L  V+R  E    + L  FL+
Sbjct:   47 VTYTLAVEAQGVSWIVKRRFKQFAALHAQLLSVLPTDAVPELP-PKQMRIGKARFDPEFIESRRSKLELFLQRVLRLIEPERLEALDNFLE 136

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig121452.4417.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig121452.4417.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A482R764_9ARCH	1.340e-5	38.46	PX domain-containing protein (Fragment) n=1 Tax=ar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001683	Phox homologous domain	PFAM	PF00787	PX	coord: 2..90 e-value: 9.4E-12 score: 44.9
IPR001683	Phox homologous domain	PROSITE	PS50195	PX	coord: 1..95 score: 14.907
IPR036871	PX domain superfamily	GENE3D	3.30.1520.10		coord: 1..102 e-value: 7.2E-18 score: 66.6
IPR036871	PX domain superfamily	SUPERFAMILY	64268	PX domain	coord: 1..91
IPR039358	Sorting nexin-like	PANTHER	PTHR10555	SORTING NEXIN	coord: 1..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig121452	contig	M-pyrifera_M_contig121452:223..534 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig121452.4417.1	mRNA_M-pyrifera_M_contig121452.4417.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig121452 223..534 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig121452.4417.1 ID=prot_M-pyrifera_M_contig121452.4417.1|Name=mRNA_M-pyrifera_M_contig121452.4417.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp
HVAYLVRVKTVVRTWIVQRRYREFAALYRCLCSALPADEVPHLPTPSEMR
AFRGGMVSEQRRLALQTWLGMVVRRKEMWECDDLCLFLDDRRRTLGLQAA
LARL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001683	Phox
IPR036871	PX_dom_sf
IPR039358	Sorting_nexin-like