prot_M-pyrifera_M_contig12139.4397.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig12139.4397.1
Unique Name	prot_M-pyrifera_M_contig12139.4397.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	190

Homology

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BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 2.330e-105
Identity = 164/189 (86.77%), Postives = 173/189 (91.53%), Query Frame = 0

Query:    1 MLRRASASVVGRARVAARGVHTEAKLKEMGIELPTPKAPLGNFVMSVRTGNLLYTSGHLPISLEGDLTTGKVGQEVSEEEAKEAARKVAIQLIATIKKDLGDLDRVKRIVKLVGFVNCTDGFMGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFEDRGPAGKKDDDWTVTKRP 189
            MLRR S S+VGRA V  R VHTEAKLKE+GIELPTPKAPLGNFVM+VRTGNLLYTSGHLP SLEG+ TTGKVGQE++EEEA+EAARKVAIQLIA+IKKDLGDLDRV RIVKLVGFVNCTDGF GQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEF+D G  G  DDDWTV KRP
Sbjct:    1 MLRRVS-SLVGRAAVRPRRVHTEAKLKELGIELPTPKAPLGNFVMTVRTGNLLYTSGHLPTSLEGETTTGKVGQELNEEEAQEAARKVAIQLIASIKKDLGDLDRVTRIVKLVGFVNCTDGFAGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDDGGKKG--DDDWTVLKRP 186

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BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 217 bits (553), Expect = 3.670e-69
Identity = 103/153 (67.32%), Postives = 128/153 (83.66%), Query Frame = 0

Query:   20 VHTEAKLKEMGIELPTPKAPLGNFVMSVRTGNLLYTSGHLPISLEGDLTTGKVGQEVSEEEAKEAARKVAIQLIATIKKDLGDLDRVKRIVKLVGFVNCTDGFMGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 172
            +HTEAKL EMG++LP+P  P GNF M+V++G ++Y SGHLP    G L TGKVG EVS EEA+ AA+ +A+ L++++KK++GDLDRVKRIVKLVGFVNC DGF  QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE ED
Sbjct:   32 IHTEAKLTEMGLKLPSPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 184

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BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 216 bits (551), Expect = 3.840e-68
Identity = 103/153 (67.32%), Postives = 127/153 (83.01%), Query Frame = 0

Query:   20 VHTEAKLKEMGIELPTPKAPLGNFVMSVRTGNLLYTSGHLPISLEGDLTTGKVGQEVSEEEAKEAARKVAIQLIATIKKDLGDLDRVKRIVKLVGFVNCTDGFMGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 172
            +HTEAKL EMG++LP P  P GNF M+V++G ++Y SGHLP    G L TGKVG EVS EEA+ AA+ +A+ L++++KK++GDLDRVKRIVKLVGFVNC DGF  QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE ED
Sbjct:   83 IHTEAKLTEMGLKLPPPGVPKGNFAMAVKSGKMIYLSGHLPTDANGQLLTGKVGAEVSPEEAQGAAKLIALNLLSSLKKEVGDLDRVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 235

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BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot
Match: A0A5A8CF06_CAFRO (YjgF_endoribonc domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CF06_CAFRO)

HSP 1 Score: 211 bits (537), Expect = 8.410e-67
Identity = 99/158 (62.66%), Postives = 127/158 (80.38%), Query Frame = 0

Query:   15 VAARGVHTEAKLKEMGIELPTPKAPLGNFVMSVRTGNLLYTSGHLPISLEGDLTTGKVGQEVSEEEAKEAARKVAIQLIATIKKDLGDLDRVKRIVKLVGFVNCTDGFMGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 172
            +AARGVHTEAK++EMG++LPTP  P  N++M  R GNLL+T+GHLP+  +G L  GKVG++ + EEA  AAR+ A+ ++ T+K ++GDLD+VKR+VKL GFVNC D F  QPKV+NGASD   EV GERGVH RSAVGTNALPMNVPVE+EAI+E ++
Sbjct:   22 LAARGVHTEAKIEEMGLKLPTPPTPAANYIMCHRVGNLLFTAGHLPMQEDGQLFNGKVGKDFTTEEAYTAARQCALAILGTVKAEIGDLDKVKRVVKLTGFVNCVDAFSAQPKVLNGASDFMGEVLGERGVHVRSAVGTNALPMNVPVEVEAIIEIDE 179

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BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.420e-64
Identity = 100/153 (65.36%), Postives = 125/153 (81.70%), Query Frame = 0

Query:   20 VHTEAKLKEMGIELPTPKAPLGNFVMSVRTGNLLYTSGHLPISLEGDLTTGKVGQEVSEEEAKEAARKVAIQLIATIKKDLGDLDRVKRIVKLVGFVNCTDGFMGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 172
            V  EA+L ++GI+LP   AP GN+ ++VRTGNLL+ +GH+P+   G L TGKVG + S EE +EAA+ +AI L+AT+K +LGDLD+VKRIVKLVGFVNC DGF  QP VVNGASD F +VFG++GVH+RSAVGTNALP+N+PVEIEAIVE ED
Sbjct:    2 VQIEARLAQLGIDLPDVIAPKGNYALAVRTGNLLFLAGHIPLLKSGVLMTGKVGADKSLEEGQEAAQVIAINLLATLKSELGDLDKVKRIVKLVGFVNCVDGFSQQPMVVNGASDFFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 154

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BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot
Match: A0A2R5GI79_9STRA (Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI79_9STRA)

HSP 1 Score: 201 bits (510), Expect = 1.210e-62
Identity = 95/155 (61.29%), Postives = 126/155 (81.29%), Query Frame = 0

Query:   18 RGVHTEAKLKEMGIELPTPKAPLGNFVMSVRTGNLLYTSGHLPISLEGDLTTGKVGQEVSEEEAKEAARKVAIQLIATIKKDLGDLDRVKRIVKLVGFVNCTDGFMGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 172
            RGVHTEAKL+++G  LP   +P G++ + VR+GN ++T+GHLP    GDL  GKVG ++S EEA +AA+  A+ ++AT+K +LGDLDRV R+VK+VGFVNC DGF  QP+V+NGASDLFAEV GERG+H+RSAVGTN+LP+N+PVE+EAIVE  +
Sbjct:   29 RGVHTEAKLEKLGYTLPQVASPKGSYQLCVRSGNQMFTAGHLPQPANGDLLVGKVGVDLSVEEANKAAQYCALSILATLKAELGDLDRVARVVKVVGFVNCADGFAQQPQVINGASDLFAEVLGERGLHARSAVGTNSLPLNIPVEVEAIVEISE 183

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BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot
Match: A0A812PJA3_9DINO (TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PJA3_9DINO)

HSP 1 Score: 201 bits (510), Expect = 1.570e-62
Identity = 98/158 (62.03%), Postives = 127/158 (80.38%), Query Frame = 0

Query:   13 ARVAARGVHTEAKLKEMGIELPTPKAPLGNFVMSVRTGNLLYTSGHLPISLEGDLTTGKVGQEVSEEEAKEAARKVAIQLIATIKKDLGDLDRVKRIVKLVGFVNCTDGFMGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEF 170
            AR+ A GVHTEAKL+E+G+ELP P     N+++SVR+G+ ++T+GHLP+  +G L +GKVG +++ EEA  AA  V + +++T+K +LGDLDRVKRIVKL GFVNC D F  QPKV+NG SDLF +VFG RGVH+RSA+GTNALP+NVPVEIEAIVE 
Sbjct:   22 ARLGACGVHTEAKLEELGLELPPPGKAQANYILSVRSGDTIFTAGHLPMMHDGTLMSGKVGVDLNTEEAYAAAELVGLNILSTLKAELGDLDRVKRIVKLNGFVNCVDSFSAQPKVINGISDLFGKVFGARGVHARSALGTNALPLNVPVEIEAIVEL 179

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BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot
Match: A0A2D4BR11_PYTIN (Endoribonuclease L-PSP, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR11_PYTIN)

HSP 1 Score: 199 bits (507), Expect = 2.270e-62
Identity = 96/163 (58.90%), Postives = 126/163 (77.30%), Query Frame = 0

Query:    9 VVGRARVAARGVHTEAKLKEMGIELPTPKAPLGNFVMSVRTGNLLYTSGHLPISLEGDLTTGKVGQEVSEEEAKEAARKVAIQLIATIKKDLGDLDRVKRIVKLVGFVNCTDGFMGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFE 171
            V+ R   A+RGVH E ++KE+G  LP    P GN+   VR+GN ++T+GHLP  + GDL  GK+G++++ EE  +AA  +A+ L+AT+K +LGDLD+VKRIVKLVGFVNC DGF GQP V+NGASD   +VFG++G+H+RSAVGTNALP+NV VEIEAIVE E
Sbjct:    7 VIPRIATASRGVHIERRIKELGYALPAVAEPKGNYRTCVRSGNYIFTAGHLPQPIGGDLIVGKIGKDLTPEEGYDAAHHIALSLMATLKHELGDLDKVKRIVKLVGFVNCVDGFTGQPGVINGASDTIGKVFGDKGIHARSAVGTNALPLNVAVEIEAIVEIE 169

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BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot
Match: A0A024UKU1_9STRA (YjgF_endoribonc domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UKU1_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.020e-62
Identity = 97/165 (58.79%), Postives = 126/165 (76.36%), Query Frame = 0

Query:    8 SVVGRARVAARGVHTEAKLKEMGIELPTPKAPLGNFVMSVRTGNLLYTSGHLPISLEGDLTTGKVGQEVSEEEAKEAARKVAIQLIATIKKDLGDLDRVKRIVKLVGFVNCTDGFMGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 172
            S++  A  AAR VHTEA++KE+G  LP    P GN+  SVR GNL++T+GHLP    G+L  GKVG +++ EE  EAA  VA+ L+AT+K++LGDLDRVKRIVK+VGFVNC DGF  QP V+NG SD   ++FG+RG+H+RSAVGTNALP+ +PVE+E IVE +D
Sbjct:    4 SLLKPAAAAARFVHTEARIKELGYTLPAVATPKGNYRNSVRMGNLIFTAGHLPQPAGGELIKGKVGVDLTPEEGYEAAHHVALALVATLKQELGDLDRVKRIVKVVGFVNCVDGFTAQPSVINGTSDTLVKIFGDRGIHARSAVGTNALPLGIPVEVEIIVEIQD 168

[Close]

BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot
Match: A0A835Z1E3_9STRA (Putative translation initiation inhibitor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1E3_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.780e-62
Identity = 95/158 (60.13%), Postives = 127/158 (80.38%), Query Frame = 0

Query:   15 VAARGVHTEAKLKEMGIELPTPKAPLGNFVMSVRTGNLLYTSGHLPISLEGDLTTGKVGQEVSEEEAKEAARKVAIQLIATIKKDLGDLDRVKRIVKLVGFVNCTDGFMGQPKVVNGASDLFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFED 172
            +A RGV  EA+L + GI+L  P  P GN+V +VR+GN L+ +GH+P+  + +L  GKVG++V+ E+A   AR+VAI +++T+K +LGDLDRV RIVKLVGFVNCTD F GQP V+NGASDLF EVFG++GVH+RSAVGTNALP+ +PVEIEA++EF +
Sbjct:   16 LAKRGVQIEARLAQRGIQLSDPVPPKGNYVPAVRSGNTLFLAGHIPLMPDNNLAKGKVGKDVTPEQANAIARQVAINILSTLKVELGDLDRVTRIVKLVGFVNCTDDFTGQPGVINGASDLFVEVFGKKGVHARSAVGTNALPLGIPVEIEAVIEFSE 173

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig12139.4397.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KXY4_9PHAE	2.330e-105	86.77	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR9_9STRA	3.670e-69	67.32	YjgF_endoribonc domain-containing protein n=1 Tax=...	[more]
W7TB75_9STRA	3.840e-68	67.32	Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad...	[more]
A0A5A8CF06_CAFRO	8.410e-67	62.66	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A4D9CNR0_9STRA	1.420e-64	65.36	YjgF_endoribonc domain-containing protein n=2 Tax=...	[more]
A0A2R5GI79_9STRA	1.210e-62	61.29	Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID...	[more]
A0A812PJA3_9DINO	1.570e-62	62.03	TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2...	[more]
A0A2D4BR11_PYTIN	2.270e-62	58.90	Endoribonuclease L-PSP, putative n=1 Tax=Pythium i...	[more]
A0A024UKU1_9STRA	3.020e-62	58.79	YjgF_endoribonc domain-containing protein n=3 Tax=...	[more]
A0A835Z1E3_9STRA	3.780e-62	60.13	Putative translation initiation inhibitor n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035959	RutC-like superfamily	GENE3D	3.30.1330.40		coord: 19..170 e-value: 3.5E-62 score: 210.3
IPR035959	RutC-like superfamily	SUPERFAMILY	55298	YjgF-like	coord: 22..169
IPR013813	Endoribonuclease L-PSP/chorismate mutase-like	PFAM	PF14588	YjgF_endoribonc	coord: 23..165 e-value: 1.7E-31 score: 109.4
None	No IPR available	PANTHER	PTHR43760	FAMILY NOT NAMED	coord: 21..172

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig12139	contig	M-pyrifera_M_contig12139:1033..5546 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig12139.4397.1	mRNA_M-pyrifera_M_contig12139.4397.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig12139 1033..7046 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig12139.4397.1 ID=prot_M-pyrifera_M_contig12139.4397.1|Name=mRNA_M-pyrifera_M_contig12139.4397.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp
MLRRASASVVGRARVAARGVHTEAKLKEMGIELPTPKAPLGNFVMSVRTG
NLLYTSGHLPISLEGDLTTGKVGQEVSEEEAKEAARKVAIQLIATIKKDL
GDLDRVKRIVKLVGFVNCTDGFMGQPKVVNGASDLFAEVFGERGVHSRSA
VGTNALPMNVPVEIEAIVEFEDRGPAGKKDDDWTVTKRP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR035959	RutC-like_sf
IPR013813	Endoribo_LPSP/chorism_mut-like