prot_M-pyrifera_M_contig121284.4385.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig121284.4385.1
Unique Nameprot_M-pyrifera_M_contig121284.4385.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length107
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121284.4385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 12..26
score: 35.56
coord: 53..67
score: 37.03
coord: 95..107
score: 29.88
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 69..107
e-value: 1.6E-5
score: 34.4
coord: 1..25
e-value: 190.0
score: 2.7
coord: 27..66
e-value: 4.5E-9
score: 46.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 3..25
e-value: 0.0016
score: 19.2
coord: 31..66
e-value: 5.3E-7
score: 30.2
coord: 71..107
e-value: 9.3E-9
score: 35.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..34
score: 11.778
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 34..75
score: 16.891
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 76..107
score: 16.457
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..107
e-value: 1.2E-40
score: 141.3
NoneNo IPR availablePANTHERPTHR42968FAMILY NOT NAMEDcoord: 3..107
NoneNo IPR availablePANTHERPTHR42968:SF10IP10415Pcoord: 3..107
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 53..67
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 12..26
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..107
score: 30.374
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig121284contigM-pyrifera_M_contig121284:215..535 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig121284.4385.1mRNA_M-pyrifera_M_contig121284.4385.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig121284 215..535 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig121284.4385.1 ID=prot_M-pyrifera_M_contig121284.4385.1|Name=mRNA_M-pyrifera_M_contig121284.4385.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
LEVAFSHDGTRLIAGSEDNTAIIWDIATKEKKVLAGHTASVESVVFSPDD
TRAFTASDDGTAKLWDTKSGKEILTLSSHSQGVTSVDFSPDGRFVATGSQ
DGQAILW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf