prot_M-pyrifera_M_contig12116.4353.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12116.4353.1
Unique Nameprot_M-pyrifera_M_contig12116.4353.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length142
Homology
BLAST of mRNA_M-pyrifera_M_contig12116.4353.1 vs. uniprot
Match: D7FNB2_ECTSI (SSD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB2_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 1.460e-31
Identity = 85/146 (58.22%), Postives = 92/146 (63.01%), Query Frame = 0
Query:   21 RSRYSLALTGITIVVASLATTIGLLSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLEAAPEFEISVPGLCSTKGMQSTG------------ATGPTYAWAGSRSLRG-------------SERTEEFRLENRMGAAVSKV 141
            RSRYSLALTGITIVVASLATTIGLLSLAGV TTLIVWEVVPFLTLAIGVDNMVILSREFDRLE+ PEFE         + ++  G             TGPT+                       ++ T E RLE RMGAAVSKV
Sbjct:  310 RSRYSLALTGITIVVASLATTIGLLSLAGVDTTLIVWEVVPFLTLAIGVDNMVILSREFDRLESTPEFEACASDGQHGQHLKGAGHPNGKXXXXXXDTTGPTFXXXXXXXXXXXXXXXXXXXXGDDNKTTAEARLEERMGAAVSKV 455          
BLAST of mRNA_M-pyrifera_M_contig12116.4353.1 vs. uniprot
Match: W7TJL6_9STRA (Patched family protein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJL6_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 2.790e-13
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   21 RSRYSLALTGITIVVASLATTIGLLSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLE 83
            RSR+ L   GI +V+ASLA ++G  + AG+ TTLIVWEVVPFL LAIGVDNM I++REFDRL+
Sbjct:   29 RSRFLLGSLGILVVLASLAVSLGSWAFAGLHTTLIVWEVVPFLLLAIGVDNMFIITREFDRLQ 91          
BLAST of mRNA_M-pyrifera_M_contig12116.4353.1 vs. uniprot
Match: A0A1Y1ZCB0_9FUNG (Niemann-pick C type protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZCB0_9FUNG)

HSP 1 Score: 72.4 bits (176), Expect = 4.720e-12
Identity = 40/85 (47.06%), Postives = 61/85 (71.76%), Query Frame = 0
Query:    6 RVSYSDARRRIFVCDRSRYSLALTGITIVVASLATTIGLLSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLEAAPEFEI 90
            ++S S + RR+ +   S++SLA+ GI IV+AS++ ++G+ S AGV  TLI+ EV+PFL LA+GVDN+ ILS EF+R  +   F +
Sbjct:  568 KISRSSSIRRLLI--DSKFSLAICGILIVIASVSVSVGVFSFAGVKITLIIAEVIPFLVLAVGVDNIFILSHEFERQSSDANFTV 650          
BLAST of mRNA_M-pyrifera_M_contig12116.4353.1 vs. uniprot
Match: A0A835YXX1_9STRA (SSD domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXX1_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 8.800e-12
Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 0
Query:   22 SRYSLALTGITIVVASLATTIGLLSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRL 82
            +R +LA TG+ IV AS A  I +LS  G+ TTLIVWEVVPFL LAIGVDN  +++REFDRL
Sbjct:  537 ARCALAATGLVIVAASFAAAIAVLSACGLATTLIVWEVVPFLALAIGVDNEFLVAREFDRL 597          
BLAST of mRNA_M-pyrifera_M_contig12116.4353.1 vs. uniprot
Match: A0A316UZE9_9BASI (Multidrug efflux transporter AcrB transmembrane domain-containing protein n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UZE9_9BASI)

HSP 1 Score: 70.1 bits (170), Expect = 3.050e-11
Identity = 40/75 (53.33%), Postives = 56/75 (74.67%), Query Frame = 0
Query:    7 VSYSDARRRIFVCDRSRYSLALTGITIVVASLATTIGLLSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDR 81
            +S+   R R+ V  RS+++L L GI +V+AS+++ IGLLS  GV TTLI+ EV+PFL LA+GVDN+ +LS E DR
Sbjct:  704 LSFLPTRHRLLV--RSKFTLGLFGIIMVLASVSSAIGLLSAIGVSTTLIIAEVLPFLVLAVGVDNIFLLSNEMDR 776          
BLAST of mRNA_M-pyrifera_M_contig12116.4353.1 vs. uniprot
Match: A0A316U3H2_9BASI (SSD domain-containing protein n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316U3H2_9BASI)

HSP 1 Score: 69.3 bits (168), Expect = 5.690e-11
Identity = 40/68 (58.82%), Postives = 52/68 (76.47%), Query Frame = 0
Query:   14 RRIFVCDRSRYSLALTGITIVVASLATTIGLLSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDR 81
            RR FV   S+++L L GI IV+AS+++ IGLLS  GV TTLI+ EV+PFL LA+GVDN+ +LS E DR
Sbjct:  798 RRFFV--NSKFTLGLFGIVIVLASVSSAIGLLSAMGVSTTLIIAEVLPFLVLAVGVDNIFLLSNEMDR 863          
BLAST of mRNA_M-pyrifera_M_contig12116.4353.1 vs. uniprot
Match: A0A2P4Q8B7_RHIID (SSD domain-containing protein n=10 Tax=Rhizophagus TaxID=1129544 RepID=A0A2P4Q8B7_RHIID)

HSP 1 Score: 68.6 bits (166), Expect = 1.040e-10
Identity = 36/71 (50.70%), Postives = 53/71 (74.65%), Query Frame = 0
Query:   22 SRYSLALTGITIVVASLATTIGLLSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLEAAPEFEISV 92
            S++ L ++GI IV+AS++T +G+ SL G+  TLI+ EV+PFL LA+GVDN+ IL+ EF+RL      E+SV
Sbjct:  614 SKFMLGISGIIIVLASVSTAVGIFSLLGIKVTLIIAEVIPFLVLAVGVDNIFILNHEFERLTLKSFGEVSV 684          
BLAST of mRNA_M-pyrifera_M_contig12116.4353.1 vs. uniprot
Match: A0A316Z137_9BASI (SSD domain-containing protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316Z137_9BASI)

HSP 1 Score: 68.6 bits (166), Expect = 1.060e-10
Identity = 39/71 (54.93%), Postives = 53/71 (74.65%), Query Frame = 0
Query:   14 RRIFVCDRSRYSLALTGITIVVASLATTIGLLSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLEA 84
            RR+FV   S+++L L GI +V+AS+++ +GL S AGV  TLI+ EV+PFL LA+GVDN+ ILS E DR  A
Sbjct:  806 RRVFV--ESKFTLGLFGILVVLASVSSAVGLFSAAGVKVTLIIGEVLPFLLLAVGVDNIFILSNEMDRQNA 874          
BLAST of mRNA_M-pyrifera_M_contig12116.4353.1 vs. uniprot
Match: A0A077R5Y3_9BASI (Related to NCR1-transmembrane glycoprotein, involved in sphingolipid metabolism n=1 Tax=Melanopsichium pennsylvanicum 4 TaxID=1398559 RepID=A0A077R5Y3_9BASI)

HSP 1 Score: 67.8 bits (164), Expect = 1.960e-10
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   19 CDRSRYSLALTGITIVVASLATTIGLLSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRLEAAPEFEIS----VPGLCSTKGMQSTGATG 108
            C  S+++L L GI IV+ S++  +G+ S  GV  TLI+ EV+PF+ LA+GVDN+ +L  E DR  A P    S       L S  G++STGA+G
Sbjct:  822 CVSSKFTLGLFGIIIVLCSVSCAVGIFSAMGVKVTLIIAEVIPFMLLAVGVDNIFLLCNEMDRETAQPASAASGLAQSDSLTSVPGIRSTGASG 915          
BLAST of mRNA_M-pyrifera_M_contig12116.4353.1 vs. uniprot
Match: A0A397TFM0_9GLOM (Niemann-pick C1 protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TFM0_9GLOM)

HSP 1 Score: 66.6 bits (161), Expect = 4.900e-10
Identity = 33/61 (54.10%), Postives = 50/61 (81.97%), Query Frame = 0
Query:   22 SRYSLALTGITIVVASLATTIGLLSLAGVGTTLIVWEVVPFLTLAIGVDNMVILSREFDRL 82
            S++ L ++GI IV+AS++T++G+ SL G+  TLI+ EV+PFL LA+GVDN+ IL+ EF+RL
Sbjct:  618 SKFMLGISGIIIVLASVSTSVGIFSLLGIKVTLIIAEVIPFLVLAVGVDNIFILNHEFERL 678          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12116.4353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNB2_ECTSI1.460e-3158.22SSD domain-containing protein n=2 Tax=Ectocarpus T... [more]
W7TJL6_9STRA2.790e-1365.08Patched family protein (Fragment) n=1 Tax=Nannochl... [more]
A0A1Y1ZCB0_9FUNG4.720e-1247.06Niemann-pick C type protein n=1 Tax=Basidiobolus m... [more]
A0A835YXX1_9STRA8.800e-1263.93SSD domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A316UZE9_9BASI3.050e-1153.33Multidrug efflux transporter AcrB transmembrane do... [more]
A0A316U3H2_9BASI5.690e-1158.82SSD domain-containing protein n=1 Tax=Pseudomicros... [more]
A0A2P4Q8B7_RHIID1.040e-1050.70SSD domain-containing protein n=10 Tax=Rhizophagus... [more]
A0A316Z137_9BASI1.060e-1054.93SSD domain-containing protein n=1 Tax=Tilletiopsis... [more]
A0A077R5Y3_9BASI1.960e-1043.62Related to NCR1-transmembrane glycoprotein, involv... [more]
A0A397TFM0_9GLOM4.900e-1054.10Niemann-pick C1 protein n=1 Tax=Glomus cerebriform... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000731Sterol-sensing domainPFAMPF12349Sterol-sensingcoord: 21..91
e-value: 1.6E-17
score: 63.7
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 1..81
score: 15.368
NoneNo IPR availablePANTHERPTHR45727FAMILY NOT NAMEDcoord: 21..109
NoneNo IPR availablePANTHERPTHR45727:SF2NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1coord: 21..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 49..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..141
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 24..81
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12116contigM-pyrifera_M_contig12116:216..2313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12116.4353.1mRNA_M-pyrifera_M_contig12116.4353.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12116 216..2313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12116.4353.1 ID=prot_M-pyrifera_M_contig12116.4353.1|Name=mRNA_M-pyrifera_M_contig12116.4353.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp
MRPTQRVSYSDARRRIFVCDRSRYSLALTGITIVVASLATTIGLLSLAGV
GTTLIVWEVVPFLTLAIGVDNMVILSREFDRLEAAPEFEISVPGLCSTKG
MQSTGATGPTYAWAGSRSLRGSERTEEFRLENRMGAAVSKV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000731SSD