prot_M-pyrifera_M_contig121148.4350.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig121148.4350.1
Unique Nameprot_M-pyrifera_M_contig121148.4350.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length174
Homology
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BLAST of mRNA_M-pyrifera_M_contig121148.4350.1 vs. uniprot
Match: A0A2D9FPW7_9BACT (Uncharacterized protein n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FPW7_9BACT)

HSP 1 Score: 187 bits (475), Expect = 2.260e-55
Identity = 93/177 (52.54%), Postives = 119/177 (67.23%), Query Frame = 0 
Query:    1 DFNEVPEDYLSLYKSLDLGDEWDAIEIHLEGRERPYVINRIA--KANNTLLAD-WHFIFKSVDQGKTWENLSKNTGVGISEFLYVSKEHPNQIWTGGWNNILYPYLAKXXXXXXXXXXXXENVFFNTNANVYAVTVSRKNEKVVLAGFGGGVSAANVIRKSTDGGETWETVLEGYYI 174
            D++E+PE+Y+SLY+S D G  W++I I L   E+P+V+ RIA  K++N L AD    IF S + G+TW N      VG SEFLYVSK+HPNQIWTGGWNNI  PYL K            + ++FN++ANVY   V  +N++ VL G GG V +ANVIRKS DGG+TW TVLEGY I
Sbjct:  105 DYHELPENYVSLYRSEDAGRSWESIAIELTDMEKPFVLTRIAEQKSSNDLFADAGSLIFTSTNNGETWFNQIDRELVGFSEFLYVSKDHPNQIWTGGWNNIFSPYLVKSEDGGKTWADLNQEIYFNSDANVYGAVVDPENDETVLLGLGGAVESANVIRKSEDGGDTWTTVLEGYNI 281
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BLAST of mRNA_M-pyrifera_M_contig121148.4350.1 vs. uniprot
Match: A0A0S8GPI9_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium SM23_30 TaxID=1703411 RepID=A0A0S8GPI9_9BACT)

HSP 1 Score: 53.5 bits (127), Expect = 3.840e-5
Identity = 40/122 (32.79%), Postives = 59/122 (48.36%), Query Frame = 0 
Query:   55 IFKSVDQGKTWENLSKNTGVGISEFLYVSKEHPNQIWTGGWN----NILYPYLAKXXXXXXXXXXXXENVFFNTNANVYAVTVSRKNEKVVLAGFGGGVSAANVIR---KSTDGGETWETVL 169
            I+K+V+ G TWE + +N        + VS  HPN IW G       +  Y Y   XXX         +N+  +   ++  V +  +N +VV A   G   ++N  R   K+TDGG+TWE VL
Sbjct:   95 IWKTVNNGLTWEPIFENESTFAIGDIAVSSSHPNIIWAGTGETQPRHSGYAYXXXXXXKSTDAGKSWQNMGLHDTHHIGKVIIDPENPEVVYAAAIGHFWSSNEERGVFKTTDGGKTWEKVL 216
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121148.4350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2D9FPW7_9BACT2.260e-5552.54Uncharacterized protein n=2 Tax=Balneolaceae TaxID... [more]
A0A0S8GPI9_9BACT3.840e-532.79Uncharacterized protein n=1 Tax=Phycisphaerae bact... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 6..173
e-value: 4.8E-17
score: 63.7
IPR002860BNR repeatPFAMPF02012BNRcoord: 158..167
e-value: 0.054
score: 13.5
NoneNo IPR availableSUPERFAMILY110296Oligoxyloglucan reducing end-specific cellobiohydrolasecoord: 12..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig121148contigM-pyrifera_M_contig121148:5..526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig121148.4350.1mRNA_M-pyrifera_M_contig121148.4350.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig121148 5..526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig121148.4350.1 ID=prot_M-pyrifera_M_contig121148.4350.1|Name=mRNA_M-pyrifera_M_contig121148.4350.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
DFNEVPEDYLSLYKSLDLGDEWDAIEIHLEGRERPYVINRIAKANNTLLA
DWHFIFKSVDQGKTWENLSKNTGVGISEFLYVSKEHPNQIWTGGWNNILY
PYLAKSEDNGETWVTLNENVFFNTNANVYAVTVSRKNEKVVLAGFGGGVS
AANVIRKSTDGGETWETVLEGYYI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR002860BNR_rpt