prot_M-pyrifera_M_contig121029.4332.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig121029.4332.1
Unique Name	prot_M-pyrifera_M_contig121029.4332.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	110

Homology

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BLAST of mRNA_M-pyrifera_M_contig121029.4332.1 vs. uniprot
Match: A0A5A8BHT0_9PLAN (Uncharacterized protein n=3 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8BHT0_9PLAN)

HSP 1 Score: 212 bits (540), Expect = 9.250e-69
Identity = 105/110 (95.45%), Postives = 105/110 (95.45%), Query Frame = 0

Query:    1 MLNESIPRSDMEQISTEGITFLIRRWVPLTPLIFVIVFVGVNSKHVGGWNWETVGQFVTPLVFGLCLSFLIRYLVSDFADVVCVNNSHIRFEKDGQTETMPLSNIEELRS 110
            MLNESIPRSDMEQISTEG TFLIRRWVPLTPLIFVIVFVGVNSKHV GWNWETVGQFVTPLVFGLCLSFLIRYLVSDFADVV VNNSHIRFEKDGQ ETM LSNIEELRS
Sbjct:    1 MLNESIPRSDMEQISTEGTTFLIRRWVPLTPLIFVIVFVGVNSKHVWGWNWETVGQFVTPLVFGLCLSFLIRYLVSDFADVVWVNNSHIRFEKDGQAETMLLSNIEELRS 110

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BLAST of mRNA_M-pyrifera_M_contig121029.4332.1 vs. uniprot
Match: A0A518FTT3_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FTT3_9PLAN)

HSP 1 Score: 132 bits (331), Expect = 5.430e-37
Identity = 64/110 (58.18%), Postives = 81/110 (73.64%), Query Frame = 0

Query:    1 MLNESIPRSDMEQISTEGITFLIRRWVPLTPLIFVIVFVGVNSKHVGGWNWETVGQFVTPLVFGLCLSFLIRYLVSDFADVVCVNNSHIRFEKDGQTETMPLSNIEELRS 110
            M  +S P S+MEQIST G TFLIR+W+PLTPLIF I+   + SK +  W++ET G+    ++ GLC   L+RY VS FADVV +N+S IRF+KDGQT T PL+NIEELRS
Sbjct:    1 MQQDSRPESEMEQISTGGATFLIRKWLPLTPLIFCILISFLTSKQMWRWDFETAGRLAIAVIAGLCFYGLVRYFVSGFADVVWINDSQIRFKKDGQTATTPLTNIEELRS 110

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BLAST of mRNA_M-pyrifera_M_contig121029.4332.1 vs. uniprot
Match: A0A518AAP4_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AAP4_9PLAN)

HSP 1 Score: 100 bits (248), Expect = 2.040e-24
Identity = 49/110 (44.55%), Postives = 71/110 (64.55%), Query Frame = 0

Query:    1 MLNESIPRSDMEQISTEGITFLIRRWVPLTPLIFVIVFVGVNSKHVGGWNWETVGQFVTPLVFGLCLSFLIRYLVSDFADVVCVNNSHIRFEKDGQTETMPLSNIEELRS 110
            M  +S P  +MEQIS++  TFL ++W+PLTPL+F I+   V S  +  W+ E+    V  ++ G CLS L R+LVS F D V +++S IRF+  G+ ET  L N+EEL+S
Sbjct:    1 MQQDSRPELEMEQISSDSATFLCKKWLPLTPLLFFILISFVTSGRMWRWDLESARDLVVAVIIGGCLSALFRFLVSGFVDRVWMSDSQIRFQTAGRQETTSLKNVEELKS 110

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BLAST of mRNA_M-pyrifera_M_contig121029.4332.1 vs. uniprot
Match: A0A3D3QZH4_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A3D3QZH4_9PLAN)

HSP 1 Score: 89.7 bits (221), Expect = 2.850e-20
Identity = 47/110 (42.73%), Postives = 66/110 (60.00%), Query Frame = 0

Query:    1 MLNESIPRSDMEQISTEGITFLIRRWVPLTPLIFVIVFVGVNSKHVGGWNWETVGQFVTPLVFGLCLSFLIRYLVSDFADVVCVNNSHIRFEKDGQTETMPLSNIEELRS 110
            M  ES P +++  IS    TF +++W P+  L F +    ++SK V   ++E +   V  +   L   FL RYLVS FAD V +N + IRF+KDGQ ET PL+NIEEL+S
Sbjct:    1 MSQESPPLTELTSISAGFNTFTLKKWFPIATLCFWLTLAFLSSKTVSDGDYEKIRSIVLGIFMALGFFFLARYLVSGFADEVWMNETCIRFQKDGQQETTPLTNIEELKS 110

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig121029.4332.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig121029.4332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A5A8BHT0_9PLAN	9.250e-69	95.45	Uncharacterized protein n=3 Tax=Gimesia chilikensi...	[more]
A0A518FTT3_9PLAN	5.430e-37	58.18	Uncharacterized protein n=2 Tax=Gimesia panareensi...	[more]
A0A518AAP4_9PLAN	2.040e-24	44.55	Uncharacterized protein n=2 Tax=Gimesia panareensi...	[more]
A0A3D3QZH4_9PLAN	2.850e-20	42.73	Uncharacterized protein n=2 Tax=Gimesia TaxID=1649...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 42..52
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..41
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 53..75
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 76..110
None	No IPR available	TMHMM	TMhelix		coord: 53..75
None	No IPR available	TMHMM	TMhelix		coord: 21..43

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig121029	contig	M-pyrifera_M_contig121029:186..515 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig121029.4332.1	mRNA_M-pyrifera_M_contig121029.4332.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig121029 186..515 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig121029.4332.1 ID=prot_M-pyrifera_M_contig121029.4332.1|Name=mRNA_M-pyrifera_M_contig121029.4332.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=110bp
MLNESIPRSDMEQISTEGITFLIRRWVPLTPLIFVIVFVGVNSKHVGGWN
WETVGQFVTPLVFGLCLSFLIRYLVSDFADVVCVNNSHIRFEKDGQTETM
PLSNIEELRS