prot_M-pyrifera_M_contig121020.4328.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig121020.4328.1
Unique Nameprot_M-pyrifera_M_contig121020.4328.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length115
Homology
BLAST of mRNA_M-pyrifera_M_contig121020.4328.1 vs. uniprot
Match: A0A5A8CTF6_CAFRO (Uncharacterized protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8CTF6_CAFRO)

HSP 1 Score: 90.9 bits (224), Expect = 3.340e-19
Identity = 47/122 (38.52%), Postives = 66/122 (54.10%), Query Frame = 0
Query:    1 WHPNGQIVATAGCDYRVRVFSAYLPEADGEVPDSGPFG--EAAEFGTLLAEFD-----QPKTWVHDVVWAPSGNHLAFVTQASEVYVADFTEAATSGPALQEVRHTGLPHRTCEFLSDKALI 115
            WHPN  +VA  GCDY  R+ +A++ +  G+ PD GPFG  E  EFG ++ +           W++   W+PSGN LA+ TQAS+V    F  A       Q +R  GLP  +  F+ DK L+
Sbjct:  158 WHPNSMLVAAVGCDYHCRIAAAWVTDI-GDTPDVGPFGSAEGLEFGDMIVDRSISSDTTTAAWINAAAWSPSGNCLAYATQASDVC---FLSARGGAVTEQTIRVRGLPALSLAFIDDKTLV 275          
BLAST of mRNA_M-pyrifera_M_contig121020.4328.1 vs. uniprot
Match: UPI00064520F9 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064520F9)

HSP 1 Score: 90.1 bits (222), Expect = 5.090e-19
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 0
Query:    1 WHPNGQIVATAGCDYRVRVFSAYLPEADGEVPDSGPFGEAAEFGTLLAEFDQPKTWVHDVVWAPSGNHLAFVTQASEVYVADFTEAATSGPALQEVRHTGLPHRTCEFLSDKALI 115
            WHPN  ++AT+  D++VRVF AY+ +ADG      P+GE   FG  + EFDQ   WVH + W+ SGN L F +  S + VAD T   ++ P +Q++R   LP R   F+++ +++
Sbjct:  152 WHPNNLLLATSSSDFKVRVFDAYVKDADGRQVQR-PYGEIP-FGQPIFEFDQCAGWVHALGWSASGNRLGFSSHDSTLAVADLT---SNPPTVQKLRLRNLPLRDLLFVTENSIV 261          
BLAST of mRNA_M-pyrifera_M_contig121020.4328.1 vs. uniprot
Match: A0A6A5H4H5_CAERE (ANAPC4_WD40 domain-containing protein (Fragment) n=1 Tax=Caenorhabditis remanei TaxID=31234 RepID=A0A6A5H4H5_CAERE)

HSP 1 Score: 88.2 bits (217), Expect = 1.370e-18
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 0
Query:    1 WHPNGQIVATAGCDYRVRVFSAYLPEADGEVPDSGPFGEAAEFGTLLAEFDQPKTWVHDVVWAPSGNHLAFVTQASEVYVADFTEAATSGPALQEVRHTGLPHRTCEFLSDKALI 115
            WHPN  ++A   CD++ RVFSAY+ E D E P   P+G+   FG L++E+     WVH V ++PSG  LAFV+  S V    F ++      +Q +R   LP  T E++++ +++
Sbjct:   93 WHPNNVLLAVGSCDFKCRVFSAYVKEVD-EKPSPNPWGQKMPFGQLMSEYSVGG-WVHRVAFSPSGCRLAFVSHDSSV---SFVDSTVDSQKVQNLRTIHLPFTTVEWITENSVV 202          
BLAST of mRNA_M-pyrifera_M_contig121020.4328.1 vs. uniprot
Match: A0A2G9TLX0_TELCI (WD domain, G-beta repeat protein (Fragment) n=1 Tax=Teladorsagia circumcincta TaxID=45464 RepID=A0A2G9TLX0_TELCI)

HSP 1 Score: 85.9 bits (211), Expect = 1.400e-18
Identity = 45/115 (39.13%), Postives = 65/115 (56.52%), Query Frame = 0
Query:    1 WHPNGQIVATAGCDYRVRVFSAYLPEADGEVPDSGPFGEAAEFGTLLAEFDQPKTWVHDVVWAPSGNHLAFVTQASEVYVADFTEAATSGPALQEVRHTGLPHRTCEFLSDKALI 115
            WHPN  ++A   CD+R RVFSA++ E D E P   P+G    FG L+AEF Q   WVH V ++PSG  LAFV   S +   D  +  T    L   R + LP  + E++++ +++
Sbjct:   36 WHPNNVLLAVGACDFRARVFSAWVKEVD-EKPSPNPWGSKMPFGQLMAEF-QISGWVHHVSFSPSGCRLAFVAHDSSISYVDANQDNTVAHTL---RTSCLPFTSAEWVTENSIV 145          
BLAST of mRNA_M-pyrifera_M_contig121020.4328.1 vs. uniprot
Match: A0A4D9EN01_9SAUR (Actin-related protein 2/3 complex subunit n=3 Tax=Archelosauria TaxID=1329799 RepID=A0A4D9EN01_9SAUR)

HSP 1 Score: 89.0 bits (219), Expect = 1.410e-18
Identity = 46/117 (39.32%), Postives = 70/117 (59.83%), Query Frame = 0
Query:    1 WHPNGQIVATAGCDYRVRVFSAYLPEADGEVPDSGPFGEAAEFGTLLAEFDQPKT--WVHDVVWAPSGNHLAFVTQASEVYVADFTEAATSGPALQEVRHTGLPHRTCEFLSDKALI 115
            WHPN  ++A   CD++ RVFSAY+ E D E P S P+G    FG L++EF  P +  WVH V ++ SGN LA+V+  S V VAD    A+    + +++   LP  +  F+S+ +++
Sbjct:  150 WHPNNVLLAAGSCDFKCRVFSAYIKEVD-EKPASTPWGSKMPFGQLMSEFGGPGSGGWVHSVSFSASGNRLAWVSHDSTVSVAD----ASKNMMVSQLKTEYLPFLSVSFVSENSVV 261          
BLAST of mRNA_M-pyrifera_M_contig121020.4328.1 vs. uniprot
Match: A0A183GSZ0_HELPZ (Actin-related protein 2/3 complex subunit n=1 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A183GSZ0_HELPZ)

HSP 1 Score: 89.0 bits (219), Expect = 1.450e-18
Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = 0
Query:    1 WHPNGQIVATAGCDYRVRVFSAYLPEADGEVPDSGPFGEAAEFGTLLAEFDQPKTWVHDVVWAPSGNHLAFVTQASEVYVADFTEAATSGPALQEVRHTGLPHRTCEFLSDKALI 115
            WHPN  ++A   CD+R RVFSA++ E D E P   P+G    FG L+AEF Q   WVH V ++PSG  LAFV   S +    + +A         +R + LP  + E++++ +L+
Sbjct:  168 WHPNNVLLAVGACDFRARVFSAWVKEVD-EKPSPNPWGSKMPFGQLMAEF-QVSGWVHHVTFSPSGCRLAFVAHDSSI---SYVDANQDNTVTHTLRTSSLPFTSAEWVTENSLV 277          
BLAST of mRNA_M-pyrifera_M_contig121020.4328.1 vs. uniprot
Match: A0A2P4VA15_CAERE (Uncharacterized protein n=2 Tax=Caenorhabditis remanei TaxID=31234 RepID=A0A2P4VA15_CAERE)

HSP 1 Score: 88.2 bits (217), Expect = 5.430e-18
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 0
Query:    1 WHPNGQIVATAGCDYRVRVFSAYLPEADGEVPDSGPFGEAAEFGTLLAEFDQPKTWVHDVVWAPSGNHLAFVTQASEVYVADFTEAATSGPALQEVRHTGLPHRTCEFLSDKALI 115
            WHPN  ++A   CD++ RVFSAY+ E D E P   P+G+   FG L++E+     WVH V ++PSG  LAFV+  S V    F ++      +Q +R   LP  T E++++ +++
Sbjct:  157 WHPNNVLLAVGSCDFKCRVFSAYVKEVD-EKPSPNPWGQKMPFGQLMSEYSVGG-WVHRVAFSPSGCRLAFVSHDSSV---SFVDSTVDSQKVQNLRTIHLPFTTVEWITENSVV 266          
BLAST of mRNA_M-pyrifera_M_contig121020.4328.1 vs. uniprot
Match: AR1AB_XENLA (Actin-related protein 2/3 complex subunit 1A-B n=396 Tax=Gnathostomata TaxID=7776 RepID=AR1AB_XENLA)

HSP 1 Score: 87.0 bits (214), Expect = 7.010e-18
Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = 0
Query:    1 WHPNGQIVATAGCDYRVRVFSAYLPEADGEVPDSGPFGEAAEFGTLLAEFDQPKT--WVHDVVWAPSGNHLAFVTQASEVYVADFTEAATSGPALQEVRHTGLPHRTCEFLSDKALI 115
            WHPN  ++A   CD++ RVFSAY+ E D E P S P+G    FG ++AEF    +  WVH V ++ SGN LA+V+  S V VAD    A+   ++ +++   LP  +  F+S+ +LI
Sbjct:  150 WHPNNVLLAAGSCDFKTRVFSAYIKEVD-EKPASTPWGSKMPFGQMMAEFGGVSSGGWVHSVSFSASGNKLAWVSHDSTVSVAD----ASKNMSVSQLKTEFLPLLSVIFVSENSLI 261          
BLAST of mRNA_M-pyrifera_M_contig121020.4328.1 vs. uniprot
Match: AR1AA_XENLA (Actin-related protein 2/3 complex subunit 1A-A n=8 Tax=Anura TaxID=8342 RepID=AR1AA_XENLA)

HSP 1 Score: 87.0 bits (214), Expect = 7.010e-18
Identity = 47/117 (40.17%), Postives = 70/117 (59.83%), Query Frame = 0
Query:    1 WHPNGQIVATAGCDYRVRVFSAYLPEADGEVPDSGPFGEAAEFGTLLAEFDQPKT--WVHDVVWAPSGNHLAFVTQASEVYVADFTEAATSGPALQEVRHTGLPHRTCEFLSDKALI 115
            WHPN  ++A   CD++ RVFSAY+ E D E P S P+G    FG ++AEF    +  WVH V ++ SGN LA+V+  S V VAD    A+   ++ +++   LP  +  F+S+ +LI
Sbjct:  150 WHPNNVLLAAGSCDFKTRVFSAYIKEVD-EKPASTPWGSKMPFGQMMAEFGGVSSGGWVHSVSFSASGNKLAWVSHDSTVSVAD----ASKNMSVSQLKTEFLPLLSVIFVSENSLI 261          
BLAST of mRNA_M-pyrifera_M_contig121020.4328.1 vs. uniprot
Match: A0A7L0NCL5_9PASS (ARC1A protein (Fragment) n=3 Tax=Tetrapoda TaxID=32523 RepID=A0A7L0NCL5_9PASS)

HSP 1 Score: 85.1 bits (209), Expect = 7.690e-18
Identity = 45/117 (38.46%), Postives = 69/117 (58.97%), Query Frame = 0
Query:    1 WHPNGQIVATAGCDYRVRVFSAYLPEADGEVPDSGPFGEAAEFGTLLAEFDQPKT--WVHDVVWAPSGNHLAFVTQASEVYVADFTEAATSGPALQEVRHTGLPHRTCEFLSDKALI 115
            WHPN  ++A   CD++ RVFSAY+ E D E P S P+G    FG L++EF    +  WVH V ++ SGN LA+V+  S V VAD    A+    + +++   LP  +  F+S+ +++
Sbjct:   23 WHPNNVLLAAGSCDFKCRVFSAYIKEVD-EKPASTPWGSKMPFGQLMSEFGGAGSGGWVHSVSFSASGNRLAWVSHDSTVSVAD----ASKNMMVSQLKTEFLPLLSVSFVSENSVV 134          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121020.4328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CTF6_CAFRO3.340e-1938.52Uncharacterized protein n=2 Tax=Sar TaxID=2698737 ... [more]
UPI00064520F95.090e-1940.00hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A6A5H4H5_CAERE1.370e-1837.39ANAPC4_WD40 domain-containing protein (Fragment) n... [more]
A0A2G9TLX0_TELCI1.400e-1839.13WD domain, G-beta repeat protein (Fragment) n=1 Ta... [more]
A0A4D9EN01_9SAUR1.410e-1839.32Actin-related protein 2/3 complex subunit n=3 Tax=... [more]
A0A183GSZ0_HELPZ1.450e-1838.26Actin-related protein 2/3 complex subunit n=1 Tax=... [more]
A0A2P4VA15_CAERE5.430e-1837.39Uncharacterized protein n=2 Tax=Caenorhabditis rem... [more]
AR1AB_XENLA7.010e-1840.17Actin-related protein 2/3 complex subunit 1A-B n=3... [more]
AR1AA_XENLA7.010e-1840.17Actin-related protein 2/3 complex subunit 1A-A n=8... [more]
A0A7L0NCL5_9PASS7.690e-1838.46ARC1A protein (Fragment) n=3 Tax=Tetrapoda TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..115
e-value: 2.6E-30
score: 107.4
IPR017383Actin-related protein 2/3 complex subunit 1PANTHERPTHR10709ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1coord: 1..115
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig121020contigM-pyrifera_M_contig121020:5..349 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig121020.4328.1mRNA_M-pyrifera_M_contig121020.4328.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig121020 5..349 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig121020.4328.1 ID=prot_M-pyrifera_M_contig121020.4328.1|Name=mRNA_M-pyrifera_M_contig121020.4328.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=115bp
WHPNGQIVATAGCDYRVRVFSAYLPEADGEVPDSGPFGEAAEFGTLLAEF
DQPKTWVHDVVWAPSGNHLAFVTQASEVYVADFTEAATSGPALQEVRHTG
LPHRTCEFLSDKALI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017383ARPC1
IPR036322WD40_repeat_dom_sf