prot_M-pyrifera_M_contig12099.4317.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12099.4317.1
Unique Nameprot_M-pyrifera_M_contig12099.4317.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length414
Homology
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BLAST of mRNA_M-pyrifera_M_contig12099.4317.1 vs. uniprot
Match: D8LPM2_ECTSI (TPR repeat-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPM2_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 1.160e-16
Identity = 44/50 (88.00%), Postives = 48/50 (96.00%), Query Frame = 0 
Query:    1 EESPEDDPATRARRVYHMGNLLQKRGEVKDAAKMYRSAVKLDPTHKASHY 50
            E++ EDDP+TRARRVYHMGNLLQKRGEVK+AAKMYRSAVKLDP HKASHY
Sbjct:   31 EQALEDDPSTRARRVYHMGNLLQKRGEVKEAAKMYRSAVKLDPAHKASHY 80
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12099.4317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPM2_ECTSI1.160e-1688.00TPR repeat-containing protein n=2 Tax=Ectocarpus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 47..80
e-value: 2.0E-4
score: 30.7
coord: 12..45
e-value: 0.0029
score: 26.8
coord: 81..114
e-value: 2.2
score: 17.3
coord: 149..182
e-value: 0.96
score: 18.5
coord: 115..148
e-value: 0.0059
score: 25.8
coord: 183..216
e-value: 1.7E-5
score: 34.2
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 13..45
e-value: 0.07
score: 13.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 183..216
score: 10.738
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 149..182
score: 9.263
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 115..148
score: 8.113
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 12..45
score: 10.827
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 81..114
score: 8.555
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 47..80
score: 10.768
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 112..234
e-value: 7.1E-28
score: 99.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..111
e-value: 1.2E-25
score: 92.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 14..216
NoneNo IPR availablePFAMPF13432TPR_16coord: 153..215
e-value: 1.5E-8
score: 35.1
NoneNo IPR availablePFAMPF13414TPR_11coord: 58..95
e-value: 9.0E-10
score: 38.1
IPR037919UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunitPANTHERPTHR44366FAMILY NOT NAMEDcoord: 130..220
coord: 17..145
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..216
score: 51.233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12099contigM-pyrifera_M_contig12099:2527..8364 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12099.4317.1mRNA_M-pyrifera_M_contig12099.4317.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12099 2527..8364 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12099.4317.1 ID=prot_M-pyrifera_M_contig12099.4317.1|Name=mRNA_M-pyrifera_M_contig12099.4317.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=414bp
EESPEDDPATRARRVYHMGNLLQKRGEVKDAAKMYRSAVKLDPTHKASHY
NLAGIALQELGELEEAASCYERAISLAPDYVLAHYNLAYVRQDQGRLMEA
AQHFRVAAGLDPSDVDIHISLGNVLRQDGESAGAIMAYEQAMALDGTNRM
AAYNLGGILQDNFEEEKAIECFNRTIQIDPEYADAHYNLGICLETVGRLE
QALAAYVEAQRLDPSTDEALEQAERVKALIANGAAAAAEAGDEAGTLPDL
TAMTYSGSMPSTLPQVAEEEEEVVAAAAAAALVAKADAEAKEATAFRAAR
AAEEASRAAVAATAAAERAAALISPAKRSPASGAAQGFMPAAIALGREGG
GSGEAAAVDVGGGGGGTGSVGGGGGVGVEKAEWGHRSQGERDSDSMSVDT
NLSTQALLPVGLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR037919OGT
IPR013026TPR-contain_dom