prot_M-pyrifera_M_contig120960.4309.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120960.4309.1
Unique Nameprot_M-pyrifera_M_contig120960.4309.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length112
Homology
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BLAST of mRNA_M-pyrifera_M_contig120960.4309.1 vs. uniprot
Match: A0A1V9ZRL1_9STRA (Rho-GAP domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRL1_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 8.860e-11
Identity = 42/116 (36.21%), Postives = 59/116 (50.86%), Query Frame = 0 
Query:    1 VPPVLEQLKAYLVEHGGLELAQIFLKPGDEVELLTVKDQLNREVFEECKDLYCIATLIVTWLRELSAPLLSPLSENLLLSATG----AYACPSLTDQMTEPQKTILVGGLELLGDV 112
            +P VL+ +K YLV+HGGLE   IF    D       K+ +N  VF  C D++ IA LI  W REL   L + + E L+  A G          LTD +   QK +++  L+L+  V
Sbjct:  326 IPAVLQMMKEYLVQHGGLETEGIFRLAPDRDACAAAKEAMNNGVFAGCNDVHIIANLIKVWFRELPDSLFNVIPEKLIYKACGLGDPVQVLRVLTD-VPASQKDVILWLLDLMAAV 440
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BLAST of mRNA_M-pyrifera_M_contig120960.4309.1 vs. uniprot
Match: T0R1N3_SAPDV (Rho-GAP domain-containing protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R1N3_SAPDV)

HSP 1 Score: 65.9 bits (159), Expect = 3.110e-10
Identity = 38/115 (33.04%), Postives = 60/115 (52.17%), Query Frame = 0 
Query:    1 VPPVLEQLKAYLVEHGGLELAQIFLKPGDEVELLTVKDQLNREVFEECKDLYCIATLIVTWLRELSAPLLSPLSENLLLSATGAYACPSLTDQMTE---PQKTILVGGLELLGDV 112
            +P VL+ ++ YLV++GGLE   IF    D+     VKD +N  VF  C D++ IA LI  W REL   LL  + E  +    G      + D + +    Q+++++  L+L+  V
Sbjct:  331 IPAVLQMMREYLVQNGGLETEGIFRLAPDKEACSAVKDAMNNGVFTGCSDVHIIANLIKVWFRELPDSLLDVIPEKCIYKVCGVTDPTQVLDVLRDVPTSQRSVILWLLDLMAAV 445
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BLAST of mRNA_M-pyrifera_M_contig120960.4309.1 vs. uniprot
Match: A0A067CWN0_SAPPC (Rho-GAP domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CWN0_SAPPC)

HSP 1 Score: 63.9 bits (154), Expect = 1.460e-9
Identity = 37/115 (32.17%), Postives = 61/115 (53.04%), Query Frame = 0 
Query:    1 VPPVLEQLKAYLVEHGGLELAQIFLKPGDEVELLTVKDQLNREVFEECKDLYCIATLIVTWLRELSAPLLSPLSENLLLSATGAYACPSLTDQMTE---PQKTILVGGLELLGDV 112
            +P VL+ ++ YLV++GGLE   IF    D+     VK+ +N  VF  C D++ IA LI  W REL   LL+ + E  +    G      + D + +    Q+++++  L+L+  V
Sbjct:  333 IPAVLQMMREYLVQNGGLETEGIFRLAPDKEACSAVKEAMNNGVFAGCNDVHIIANLIKVWFRELPESLLNVIPEKRIYQVCGVTDPSLVLDVLRDVPTSQRSVILWLLDLMAAV 447
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120960.4309.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A1V9ZRL1_9STRA8.860e-1136.21Rho-GAP domain-containing protein n=1 Tax=Achlya h... [more]
T0R1N3_SAPDV3.110e-1033.04Rho-GAP domain-containing protein n=2 Tax=Saproleg... [more]
A0A067CWN0_SAPPC1.460e-932.17Rho-GAP domain-containing protein n=1 Tax=Saproleg... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008936Rho GTPase activation proteinGENE3D1.10.555.10coord: 1..110
e-value: 1.4E-8
score: 36.6
IPR008936Rho GTPase activation proteinSUPERFAMILY48350GTPase activation domain, GAPcoord: 1..100
NoneNo IPR availablePANTHERPTHR23177MKIAA1688 PROTEINcoord: 1..112
IPR000198Rho GTPase-activating protein domainPROSITEPS50238RHOGAPcoord: 1..112
score: 12.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120960contigM-pyrifera_M_contig120960:197..532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120960.4309.1mRNA_M-pyrifera_M_contig120960.4309.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120960 197..532 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120960.4309.1 ID=prot_M-pyrifera_M_contig120960.4309.1|Name=mRNA_M-pyrifera_M_contig120960.4309.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
VPPVLEQLKAYLVEHGGLELAQIFLKPGDEVELLTVKDQLNREVFEECKD
LYCIATLIVTWLRELSAPLLSPLSENLLLSATGAYACPSLTDQMTEPQKT
ILVGGLELLGDV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008936Rho_GTPase_activation_prot
IPR000198RhoGAP_dom