prot_M-pyrifera_M_contig120949.4305.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120949.4305.1
Unique Nameprot_M-pyrifera_M_contig120949.4305.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length116
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120949.4305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likeSMARTSM01411GCC2_GCC3_2coord: 54..107
e-value: 3.1
score: 12.5
coord: 4..51
e-value: 0.037
score: 23.2
NoneNo IPR availableGENE3D2.10.50.10coord: 1..63
e-value: 1.6E-6
score: 30.0
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 9..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120949contigM-pyrifera_M_contig120949:166..513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120949.4305.1mRNA_M-pyrifera_M_contig120949.4305.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120949 166..513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120949.4305.1 ID=prot_M-pyrifera_M_contig120949.4305.1|Name=mRNA_M-pyrifera_M_contig120949.4305.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp
CGSGSTRVSDSECRMCELGYSQPLTATEDSCTQCTATTYADTLGSSHCTQ
CPAGFGSSIGATSLEECTSCPIGTYGLRPPSAPSTPCTDCPTGSYGVRQR
RHTFSACDRCPIGTYN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR009030Growth_fac_rcpt_cys_sf