prot_M-pyrifera_M_contig12087.4298.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12087.4298.1
Unique Nameprot_M-pyrifera_M_contig12087.4298.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length176
Homology
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BLAST of mRNA_M-pyrifera_M_contig12087.4298.1 vs. uniprot
Match: D7FKW0_ECTSI (ATG13 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW0_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 4.820e-16
Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 0 
Query:  102 VLHWPSPEQGHGYAHKRVNKPLGQGPAPFLTPGPHRHKLVPGGRQGPDVNMEPLDLGPNADVDARDP 168
            ++HWPSPE GHGYA KR +    QGPAPFLTPGPHR +  P GR   DV MEPL+LGPNA++ AR P
Sbjct:  298 MMHWPSPELGHGYAEKRTHIGPRQGPAPFLTPGPHRGR--PLGRH--DVMMEPLELGPNAEIHARGP 360
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12087.4298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKW0_ECTSI4.820e-1664.18ATG13 domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12087contigM-pyrifera_M_contig12087:8152..8875 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12087.4298.1mRNA_M-pyrifera_M_contig12087.4298.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12087 8152..8875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12087.4298.1 ID=prot_M-pyrifera_M_contig12087.4298.1|Name=mRNA_M-pyrifera_M_contig12087.4298.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
AVAAASGGETSHEQWPRLATMQEDGAMAAGTGTDGSDGYSSSRVAGLEGR
RFCTDVTGGLEIALPSDSGAAIDAHSRINSQHHRDYDAGTVDKANPGQGP
DVLHWPSPEQGHGYAHKRVNKPLGQGPAPFLTPGPHRHKLVPGGRQGPDV
NMEPLDLGPNADVDARDPCVRAVAG*
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