prot_M-pyrifera_M_contig12087.4296.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12087.4296.1
Unique Nameprot_M-pyrifera_M_contig12087.4296.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length364
Homology
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BLAST of mRNA_M-pyrifera_M_contig12087.4296.1 vs. uniprot
Match: D7FKW0_ECTSI (ATG13 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW0_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.670e-24
Identity = 129/363 (35.54%), Postives = 159/363 (43.80%), Query Frame = 0 
Query:    4 ALGEEEGTDATAR---RFYRRNSICEAPSATPVPSEQTLLSVHGNRSTAGHGPDTYAQRPPALTPPFSYCEDFSSARPAGVEADGSPFRLGQPLVSFSPPFEPPCVDPRGHGGALGEGISVGGAVESPSLGPVAKLHHGSEVTCKGPRAALGLLGTASGSPALLETLPESPFSWKGRSPENIQPPTVVDKAAPARRPASRSSPITPGRLAHARPNKAAGTDPSEGWQGLPFAVEMLDERIEPLAQDPSVFGVDDGRGVAPSLPPTSLFALCSAASSKSDLLMQNSPTMASTEQAAQTS-GFSPERGDADADTSDWEGVVPTTATSYADAGEMYGEEEVGKTVRSLEEELDGFRQFHLELERQR 362
            A G E+G     R   R YRRNSI E+ S        T     G+R TAGH   T  +     TPPFSY          G +       LGQPLVSFSPPF    V  RGH        S+                    V   GPRA +         P LLE LPESPF+ +    E  QPP V   A      AS S P  P     ++    A T        LPFA E+ D+ +   + D SV GV+ G  +  S  P++L+ALCSAASSKS  L   S     +E A QT+ GF  ER     D++D    VP+    Y        +E +   VRSLEE+L+GFR F  E+  QR
Sbjct:  407 AEGGEDGVADRGRALMRPYRRNSISESLS--------TPSGSGGSRITAGHRHSTAIE----YTPPFSY-------NTTGPDLGERNIALGQPLVSFSPPFNAVHVGQRGHDSTF----SI-------------------RVHSSGPRAPV---------PTLLEVLPESPFALRK---EGTQPPGVPGTAV-----ASSSRPFLPRLDCSSQEPTFAATSAGIDRTELPFAAELQDDGVS-ASVDSSVCGVEGG--LDSSAAPSTLYALCSAASSKSIFLADPS-----SEYAEQTAVGFLQER-----DSND----VPSPGAEYTSTAGSLPQEVI---VRSLEEDLEGFRLFQQEVLEQR 690
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12087.4296.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FKW0_ECTSI1.670e-2435.54ATG13 domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 341..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12087contigM-pyrifera_M_contig12087:3176..6410 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12087.4296.1mRNA_M-pyrifera_M_contig12087.4296.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12087 2291..7264 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12087.4296.1 ID=prot_M-pyrifera_M_contig12087.4296.1|Name=mRNA_M-pyrifera_M_contig12087.4296.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=364bp
MARALGEEEGTDATARRFYRRNSICEAPSATPVPSEQTLLSVHGNRSTAG
HGPDTYAQRPPALTPPFSYCEDFSSARPAGVEADGSPFRLGQPLVSFSPP
FEPPCVDPRGHGGALGEGISVGGAVESPSLGPVAKLHHGSEVTCKGPRAA
LGLLGTASGSPALLETLPESPFSWKGRSPENIQPPTVVDKAAPARRPASR
SSPITPGRLAHARPNKAAGTDPSEGWQGLPFAVEMLDERIEPLAQDPSVF
GVDDGRGVAPSLPPTSLFALCSAASSKSDLLMQNSPTMASTEQAAQTSGF
SPERGDADADTSDWEGVVPTTATSYADAGEMYGEEEVGKTVRSLEEELDG
FRQFHLELERQRS*
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