prot_M-pyrifera_M_contig1208.4279.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1208.4279.1
Unique Nameprot_M-pyrifera_M_contig1208.4279.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length124
Homology
BLAST of mRNA_M-pyrifera_M_contig1208.4279.1 vs. uniprot
Match: A0A6H5KKG1_9PHAE (VPS13_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG1_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 1.970e-62
Identity = 113/124 (91.13%), Postives = 120/124 (96.77%), Query Frame = 0
Query:    1 VFLALDKSPLLFRPVSLRGVLARPDQIAEQIASNYAMDALLRSLAVVGSLEALGSPTTLLSAWGKGVYDLFAMPIRALPQGPTSTVRATFRGLSSLLRHASAGTLSSVSGVTNALSRNLRSRGG 124
            VFLALDKSPLLFRPVSLRGVLARPD+IAEQIASNYA+DALLRSLAVVGSLEALGSPTTLLS WGKGVYDLFAMPI+A+PQGP+ST RATFRG+SSLLRHASAGTLSSVSGV+NALSRNL  RGG
Sbjct: 4356 VFLALDKSPLLFRPVSLRGVLARPDEIAEQIASNYAVDALLRSLAVVGSLEALGSPTTLLSEWGKGVYDLFAMPIKAMPQGPSSTFRATFRGVSSLLRHASAGTLSSVSGVSNALSRNLGGRGG 4479          
BLAST of mRNA_M-pyrifera_M_contig1208.4279.1 vs. uniprot
Match: A0A7S1G5R3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G5R3_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.040e-19
Identity = 56/124 (45.16%), Postives = 79/124 (63.71%), Query Frame = 0
Query:    2 FLALDKSPLLFRPVSLRGVLARPDQIAEQIASNYAMDALLRSLAVVGSLEALGSPTTLLSAWGKGVYDLFAMPIRALPQ-----GPTSTVRATF-RGLSSLLRHASAGTLSSVSGVTNALSRNL 119
            FL++D++PL    VSL  V A P+++A ++ +NY  DA+LRS A+VGSLE LG+PT  +   G G+ DLFA+P+ A+       G  + +   F RG  SL  H + G LSSV+G + ALSRNL
Sbjct:   37 FLSVDEAPLALASVSLDCVRATPERLARELLANYIADAILRSPALVGSLELLGNPTRFMRGLGSGLRDLFALPMLAIRDREKGVGSGAGILTGFARGWGSLAAHVAEGALSSVAGFSAALSRNL 160          
BLAST of mRNA_M-pyrifera_M_contig1208.4279.1 vs. uniprot
Match: A0A0H5QH82_9EUKA (VPS13_C domain-containing protein n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QH82_9EUKA)

HSP 1 Score: 92.8 bits (229), Expect = 1.880e-19
Identity = 46/118 (38.98%), Postives = 79/118 (66.95%), Query Frame = 0
Query:    2 FLALDKSPLLFRPVSLRGVLARPDQIAEQIASNYAMDALLRSLAVVGSLEALGSPTTLLSAWGKGVYDLFAMPIRALPQGPTSTVRATFRGLSSLLRHASAGTLSSVSGVTNALSRNL 119
            +L     P+    V L+ VL+  D++ +++++NY  D ++ S  + GS++ LG+PT L+S++ KG+  L  +P RAL +GP +   AT +G+ SLL++ S GTL+SVSG T++L+RN+
Sbjct: 1728 YLGCQSLPVRLSAVELKSVLSSSDRLIKELSANYLADVIMISPLLFGSMDLLGNPTQLISSFSKGIQGLVRLPSRALTRGPRALAWATLQGIGSLLQNISEGTLTSVSGFTHSLARNV 1845          
BLAST of mRNA_M-pyrifera_M_contig1208.4279.1 vs. uniprot
Match: R7TEM8_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7TEM8_CAPTE)

HSP 1 Score: 88.2 bits (217), Expect = 7.920e-18
Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = 0
Query:    1 VFLALDKSPLLFRPVSLRGVLARPDQIAEQIASNYAMDALLRSLAVVGSLEALGSPTTLLSAWGKGVYDLFAMPIRALPQGPTSTVRATFRGLSSLLRHASAGTLSSVSGVTNALSRNL 119
            VFLA D +PL F     + +     Q+A  +   YA  AL R+  VVGSLE LG+PT L     +GV DLF MP + L +GP + +    RG+ SLLRH S GTL+S++   +++SRN+
Sbjct: 3440 VFLASDNTPLKFGRYE-KSLFTSYQQLARSLTMYYASGALFRAGLVVGSLEILGNPTGLARHLSQGVADLFRMPYQGLTRGPGAFIGGVTRGMGSLLRHVSTGTLNSITSFASSVSRNM 3557          
BLAST of mRNA_M-pyrifera_M_contig1208.4279.1 vs. uniprot
Match: H2XP00_CIOIN (Uncharacterized protein n=3 Tax=Ciona intestinalis TaxID=7719 RepID=H2XP00_CIOIN)

HSP 1 Score: 86.3 bits (212), Expect = 3.730e-17
Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 0
Query:    1 VFLALDKSPLLFRPVSLRGVLARPDQIAEQIASNYAMDALLRSLAVVGSLEALGSPTTLLSAWGKGVYDLFAMPIRALPQGPTSTVRATFRGLSSLLRHASAGTLSSVSGVTNALSRNL 119
            +++++D+  L F   S R V     ++ +++  +Y  + +  +  V+GSL+ LG+P T L ++ KGV D   MP   L  GPT+ V    RGLSSLLRH S+GTL SV+ + +++SRNL
Sbjct: 3093 LYVSIDRGVLSFSKFSCRDVDTTVAELTQELMRHYFAETVFGAGWVIGSLDLLGNPATALRSYAKGVSDFLLMPYEGLMMGPTAFVGGFTRGLSSLLRHLSSGTLRSVTNIASSISRNL 3211          
BLAST of mRNA_M-pyrifera_M_contig1208.4279.1 vs. uniprot
Match: UPI000719AC75 (vacuolar protein sorting-associated protein 13B-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719AC75)

HSP 1 Score: 85.5 bits (210), Expect = 6.970e-17
Identity = 50/119 (42.02%), Postives = 69/119 (57.98%), Query Frame = 0
Query:    1 VFLALDKSPLLFRPVSLRGVLARPDQIAEQIASNYAMDALLRSLAVVGSLEALGSPTTLLSAWGKGVYDLFAMPIRALPQGPTSTVRATFRGLSSLLRHASAGTLSSVSGVTNALSRNL 119
            +FLA D +PL F     R +   P  +A  +  +YA  A LR+  VVGSL+ LGSPT++L     G+ DLF MP      GP S +    RG +SLLRH SAG ++SV+    ++SRN+
Sbjct: 3698 LFLASDSTPLSFGAFERRDLCTTPWCLANALLRHYAAGAALRAGWVVGSLDLLGSPTSMLREVTSGMADLFRMPYEGATHGPGSFIAGMSRGAASLLRHTSAGAITSVTNFALSVSRNM 3816          
BLAST of mRNA_M-pyrifera_M_contig1208.4279.1 vs. uniprot
Match: A0A6P4ZTE8_BRABE (vacuolar protein sorting-associated protein 13B-like n=4 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZTE8_BRABE)

HSP 1 Score: 85.1 bits (209), Expect = 9.500e-17
Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0
Query:    1 VFLALDKSPLLFRPVSLRGVLARPDQIAEQIASNYAMDALLRSLAVVGSLEALGSPTTLLSAWGKGVYDLFAMPIRALPQGPTSTVRATFRGLSSLLRHASAGTLSSVSGVTNALSRNL 119
            VF++ D + L F+  S   V      + + +A +Y   AL R+  V+GSL+ LGSP +LL +   G+ D F +P   L +GP + V    +G SSL+RH SAGTL+S+  + N++SRN+
Sbjct: 3550 VFISSDHTRLTFKHFSRTPVFTVSRNLVQDLALHYGSGALFRAGWVLGSLDILGSPASLLGSISSGISDFFRLPYEGLTRGPGAFVSGVTKGASSLVRHVSAGTLTSIVNLANSISRNM 3668          
BLAST of mRNA_M-pyrifera_M_contig1208.4279.1 vs. uniprot
Match: C3ZQS8_BRAFL (Uncharacterized protein n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZQS8_BRAFL)

HSP 1 Score: 85.1 bits (209), Expect = 9.510e-17
Identity = 46/119 (38.66%), Postives = 71/119 (59.66%), Query Frame = 0
Query:    1 VFLALDKSPLLFRPVSLRGVLARPDQIAEQIASNYAMDALLRSLAVVGSLEALGSPTTLLSAWGKGVYDLFAMPIRALPQGPTSTVRATFRGLSSLLRHASAGTLSSVSGVTNALSRNL 119
            VF++ D + L F+  S   V      + + +A +Y   AL R+  V+GSL+ LGSP +LL +   G+ D F +P   L +GP + V    +G SSL+RH SAGTL+S+  + N++SRN+
Sbjct: 3881 VFISSDHTRLTFKNFSRTPVFTVSRNLVQDLALHYGSGALFRAGWVLGSLDILGSPASLLGSISSGISDFFRLPYEGLTRGPGAFVSGVTKGASSLVRHVSAGTLTSIVNLANSISRNM 3999          
BLAST of mRNA_M-pyrifera_M_contig1208.4279.1 vs. uniprot
Match: A0A8B7YAP6_ACAPL (vacuolar protein sorting-associated protein 13B-like isoform X1 n=4 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YAP6_ACAPL)

HSP 1 Score: 84.3 bits (207), Expect = 1.760e-16
Identity = 48/119 (40.34%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 VFLALDKSPLLFRPVSLRGVLARPDQIAEQIASNYAMDALLRSLAVVGSLEALGSPTTLLSAWGKGVYDLFAMPIRALPQGPTSTVRATFRGLSSLLRHASAGTLSSVSGVTNALSRNL 119
            +F+A D +PL FR      + A   Q+A+ +  +Y   AL ++  V+GSLE LG+P  LL   G G+ D   +P   L +GP + V     G SSLLRH SAGTL+S++   +++SRNL
Sbjct: 2669 LFIAADSTPLSFRQFDSGPMFATTRQLAQALTMHYTSGALFKAGWVLGSLELLGNPAGLLRNVGSGLADSVMLPYEGLTRGPAAFVAGVTSGTSSLLRHLSAGTLTSITKFASSVSRNL 2787          
BLAST of mRNA_M-pyrifera_M_contig1208.4279.1 vs. uniprot
Match: UPI00145500BC (LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13B-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145500BC)

HSP 1 Score: 80.5 bits (197), Expect = 3.950e-15
Identity = 46/119 (38.66%), Postives = 69/119 (57.98%), Query Frame = 0
Query:    1 VFLALDKSPLLFRPVSLRGVLARPDQIAEQIASNYAMDALLRSLAVVGSLEALGSPTTLLSAWGKGVYDLFAMPIRALPQGPTSTVRATFRGLSSLLRHASAGTLSSVSGVTNALSRNL 119
            +F+A+D +PL F       V A   Q+ + +  +Y   AL ++  V+GSLE LG+P  LL     G+ D F +P   L +GP + V     G SSLL+H SAGTL+S++   +++SRNL
Sbjct: 3681 LFIAVDSTPLSFNQFDSGPVFATTRQLVQALTVHYTSGALFKAGWVLGSLEILGNPAGLLRNVRSGLTDSFMLPYEGLTRGPAAFVAGVTSGTSSLLKHLSAGTLTSITMFASSVSRNL 3799          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1208.4279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKG1_9PHAE1.970e-6291.13VPS13_C domain-containing protein n=2 Tax=Ectocarp... [more]
A0A7S1G5R3_9STRA1.040e-1945.16Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A0H5QH82_9EUKA1.880e-1938.98VPS13_C domain-containing protein n=2 Tax=Spongosp... [more]
R7TEM8_CAPTE7.920e-1842.86Uncharacterized protein n=1 Tax=Capitella teleta T... [more]
H2XP00_CIOIN3.730e-1738.66Uncharacterized protein n=3 Tax=Ciona intestinalis... [more]
UPI000719AC756.970e-1742.02vacuolar protein sorting-associated protein 13B-li... [more]
A0A6P4ZTE8_BRABE9.500e-1738.66vacuolar protein sorting-associated protein 13B-li... [more]
C3ZQS8_BRAFL9.510e-1738.66Uncharacterized protein n=2 Tax=Branchiostoma flor... [more]
A0A8B7YAP6_ACAPL1.760e-1640.34vacuolar protein sorting-associated protein 13B-li... [more]
UPI00145500BC3.950e-1538.66LOW QUALITY PROTEIN: vacuolar protein sorting-asso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031645Vacuolar protein sorting-associated protein 13, C-terminalPFAMPF16909VPS13_Ccoord: 4..119
e-value: 1.7E-19
score: 70.2
IPR039782Vacuolar protein sorting-associated protein 13BPANTHERPTHR12517FAMILY NOT NAMEDcoord: 1..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1208contigM-pyrifera_M_contig1208:3451..4530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1208.4279.1mRNA_M-pyrifera_M_contig1208.4279.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1208 3451..4530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1208.4279.1 ID=prot_M-pyrifera_M_contig1208.4279.1|Name=mRNA_M-pyrifera_M_contig1208.4279.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
VFLALDKSPLLFRPVSLRGVLARPDQIAEQIASNYAMDALLRSLAVVGSL
EALGSPTTLLSAWGKGVYDLFAMPIRALPQGPTSTVRATFRGLSSLLRHA
SAGTLSSVSGVTNALSRNLRSRGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031645VPS13_C
IPR039782VPS13B