prot_M-pyrifera_M_contig120745.4272.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120745.4272.1
Unique Nameprot_M-pyrifera_M_contig120745.4272.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length159
Homology
BLAST of mRNA_M-pyrifera_M_contig120745.4272.1 vs. uniprot
Match: A0A1Y1HSB7_KLENI (Transcription elongation factor SPT5 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSB7_KLENI)

HSP 1 Score: 88.2 bits (217), Expect = 2.560e-17
Identity = 51/144 (35.42%), Postives = 82/144 (56.94%), Query Frame = 0
Query:    4 VLKVPKNNIILSAGNWVRIKKGMHKGDLAQILSVGEDQGSALVKFVPRLDLSNVGRRA-GSGVKRKRLTRVQQKMFDREELEQMGAEVADSNYCGIDCVAFKSH-RFVGGFQIKNMALKSLDIMGVVPSPNELQKFQEKNEEED 145
            VL++ K  + L    WVR++ G++KGDLAQ++ V   +  A +K +PR+DL  + RR  G G  +K+ TR  Q+ F  +E   +   V        D   F ++ +F  G+  K ++LKS+++  VVPS +ELQ+FQ   + ED
Sbjct:  314 VLRITKKQLELQRDTWVRVRNGLYKGDLAQVVDVDHVRNQATLKLIPRVDLQELARRLEGEGRDQKKKTRPPQRFFSLDEARDLRIPVESKRDNYGDAFEFINNLKFRDGYFFKTVSLKSIEVKEVVPSFDELQRFQNAPQGED 457          
BLAST of mRNA_M-pyrifera_M_contig120745.4272.1 vs. uniprot
Match: A0A3S3Q223_9ACAR (DRB sensitivity-inducing factor large subunit (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S3Q223_9ACAR)

HSP 1 Score: 86.7 bits (213), Expect = 8.180e-17
Identity = 52/150 (34.67%), Postives = 82/150 (54.67%), Query Frame = 0
Query:    1 MVGVLKVPKNNIILSAGNWVRIKKGMHKGDLAQILSVGEDQGSALVKFVPRLDLSNVGRRAGS--------GVKRKRLTRVQQKMFDREELEQMGAEVADSNYCGIDCVAFKSHRFVGGFQIKNMALKSLDIMGVVPSPNELQKFQEKNE 142
            M  +LKV K   ++  G WVR+K+G++K DLAQ+  V   QG   +K +PR+D +   R+ G+          KRKR  R   K+FD + +  +G EV        D + F+ +R+  GF  KN  + ++ + GV P+ +EL+KF+E  E
Sbjct:  203 MTDILKVTKEQALIKPGQWVRLKRGIYKDDLAQVDYVDIAQGQVHLKLIPRIDYT---RKRGALRTTENEASAKRKRTKRPVAKLFDIDAVRAIGGEVTSDG----DFMVFEGNRYRRGFLFKNFLISAIVVDGVKPTLSELEKFEEHPE 345          
BLAST of mRNA_M-pyrifera_M_contig120745.4272.1 vs. uniprot
Match: T1FU80_HELRO (Transcription elongation factor SPT5 n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FU80_HELRO)

HSP 1 Score: 86.7 bits (213), Expect = 8.750e-17
Identity = 58/160 (36.25%), Postives = 84/160 (52.50%), Query Frame = 0
Query:    1 MVGVLKVPKNNIILSAGNWVRIKKGMHKGDLAQILSVGEDQGSALVKFVPRLDLS-NVG----RRAGSGVKRKRLTRVQQKMFDREELEQMGAEVADSNYCGIDCVAFKSHRFVGGFQIKNMALKSLDIMGVVPSPNELQKFQEKNEEEDLASAASATNF 155
            M  VL+V K    L +  WVR+KKG+ K DLA +  V   Q    +K +PR+D S N G     + G+  KRK   R  QK FD E +  +G EVA+      D + F+ +R+  GF  KN  + ++ I GV P+ +EL+KF  + E  ++ S   A  F
Sbjct:  256 MPSVLRVTKETNNLKSKQWVRLKKGVFKDDLAMVDYVDPSQNMVFLKLIPRIDYSRNRGVMKSTQNGTAEKRKIYRRPPQKPFDPEAIRAIGGEVANDG----DFMIFEGNRYNKGFLYKNFNINAIIIDGVTPTLSELEKFDHQPEAVEVKSLTEAQTF 411          
BLAST of mRNA_M-pyrifera_M_contig120745.4272.1 vs. uniprot
Match: A0A7D9IBC1_PARCT (Transcription elongation factor SPT5 n=3 Tax=Alcyonacea TaxID=40677 RepID=A0A7D9IBC1_PARCT)

HSP 1 Score: 85.9 bits (211), Expect = 1.620e-16
Identity = 54/157 (34.39%), Postives = 84/157 (53.50%), Query Frame = 0
Query:    1 MVGVLKVPKNNIILSAGNWVRIKKGMHKGDLAQILSVGEDQGSALVKFVPRLDLS----NVGRRAGSGVKRKRLTRVQQKMFDREELEQMGAEVADSNYCGIDCVAFKSHRFVGGFQIKNMALKSLDIMGVVPSPNELQKFQEKNEEEDLASAASAT 153
            M  VL V K+ + L A  WVR+K+G+ K DLAQI  V   +    +K +PR+D +    N         KRKR  +  QK+F+ E L  +G E+        D   F+ +R+  GF  KNMA+ +L   G+ P+ +EL+KF+  +E+ D+   A ++
Sbjct:  236 MTDVLNVVKDLVQLKAKQWVRLKRGIFKDDLAQIDYVHPSKNQVTLKMIPRIDYAKPRGNKAIEPEDQEKRKRFRKPPQKLFEPEALRGIGGEIHQDG----DFYIFEGNRYRQGFLYKNMAISALVTEGIKPTLSELEKFESTSEDVDIELPAKSS 388          
BLAST of mRNA_M-pyrifera_M_contig120745.4272.1 vs. uniprot
Match: UPI001F04CDA1 (transcription elongation factor SPT5-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04CDA1)

HSP 1 Score: 84.7 bits (208), Expect = 4.040e-16
Identity = 56/150 (37.33%), Postives = 81/150 (54.00%), Query Frame = 0
Query:    1 MVGVLKVPKNNIILSAGNWVRIKKGMHKGDLAQILSVGEDQGSALVKFVPRLDLSNV-GRRAGSGV---KRKRLTRVQQKMFDREELEQMGAEVADSNYCGIDCVAFKSHRFVGGFQIKNMALKSLDIMGVVPSPNELQKFQEKNEEEDL 146
            M  VL V K+ + L A  WVR+K+G+ K DLAQI  V   +    +K +PR+D +   G +A       K+KR  R  QK+FD E L   G E+        D   F+ +RF  GF  KNMA+ +L   G+ P+ +EL+KF+   ++ DL
Sbjct:  131 MTDVLNVVKDLVQLKAKQWVRMKRGIFKDDLAQIDYVHPSKNQVTLKMIPRIDYTKPRGSKALESQEQEKKKRFRRPPQKLFDAEALRSNGGEIHHDG----DFSLFEGNRFRQGFLYKNMAISALITEGIKPTLSELEKFESTTDDIDL 276          
BLAST of mRNA_M-pyrifera_M_contig120745.4272.1 vs. uniprot
Match: UPI001CF380ED (transcription elongation factor SPT5-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF380ED)

HSP 1 Score: 84.7 bits (208), Expect = 4.080e-16
Identity = 50/150 (33.33%), Postives = 81/150 (54.00%), Query Frame = 0
Query:    1 MVGVLKVPKNNIILSAGNWVRIKKGMHKGDLAQILSVGEDQGSALVKFVPRLDLSNVGRRAGS----GVKRKRLTRVQQKMFDREELEQMGAEVADSNYCGIDCVAFKSHRFVGGFQIKNMALKSLDIMGVVPSPNELQKFQEKNEEEDL 146
            M  V+KV K  + +    WVR+K+G++K DLAQ+  V   +    +K +PR+D S     A S    G KRK+  R   K+FD + +  +G E+        D + F+  R+ GGF  K +A+ ++ + G+ P+  ELQKF+   E+ +L
Sbjct:  233 MTDVMKVVKEVVSIKPKQWVRLKRGIYKDDLAQVDYVNTARNQVTLKMIPRIDYSRSRGLAKSAEDAGEKRKKKRRPAPKLFDADAIRGIGGEIGQDG----DFMIFEGSRYRGGFMYKTLAMSAIVVEGIKPTLLELQKFETAPEDVEL 378          
BLAST of mRNA_M-pyrifera_M_contig120745.4272.1 vs. uniprot
Match: A0A2R6XA60_MARPO (Transcription elongation factor SPT5 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XA60_MARPO)

HSP 1 Score: 84.3 bits (207), Expect = 5.590e-16
Identity = 53/152 (34.87%), Postives = 81/152 (53.29%), Query Frame = 0
Query:    1 MVGVLKVPKNNIILSAGNWVRIKKGMHKGDLAQILSVGEDQGSALVKFVPRLDLS------NVGRRAGSGVKRKRLTRVQQKMFDREELEQMGAEVA---DSNYCGIDCVAFKSHRFVGGFQIKNMALKSLDIMGVVPSPNELQKFQEKNEE 143
            M  VL V K ++ +    WVR+K G++KGDLA+++ V   +  A +K +PR+DL       N G   GS    K   R   +  + +EL+ +   +    D N+ G     F   +F  G+  K ++LKS+D  GVVPS +ELQKFQ+  +E
Sbjct:  257 MTDVLSVEKKSVDIDQDTWVRVKNGVYKGDLAKVVDVDHVRQRATIKLIPRVDLQALALKMNEGSIKGSKDDAKNRPRPAPRFINVQELQDLKISIERKRDPNHAGEYFEFFGGMQFKDGYLYKGVSLKSIDSNGVVPSFDELQKFQKPTDE 408          
BLAST of mRNA_M-pyrifera_M_contig120745.4272.1 vs. uniprot
Match: UPI000A2A7FF5 (transcription elongation factor SPT5 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7FF5)

HSP 1 Score: 84.0 bits (206), Expect = 7.490e-16
Identity = 51/149 (34.23%), Postives = 82/149 (55.03%), Query Frame = 0
Query:    1 MVGVLKVPKNNIILSAGNWVRIKKGMHKGDLAQILSVGEDQGSALVKFVPRLDLSNVG---RRAGSGVKRKRLTRVQQKMFDREELEQMGAEVADSNYCGIDCVAFKSHRFVGGFQIKNMALKSLDIMGVVPSPNELQKFQEKNEEEDL 146
            M  VLKV K  + L A  WVR+K+G++K DLAQ+  V   +    +K +PR+D S      R A    KRKR  +  QK+F  +E+  +G E+        D + F+++R+ GG   K +A+ ++   G+ P+  EL+KF+   E+ +L
Sbjct:  130 MTDVLKVVKEVVALKAKQWVRLKRGIYKDDLAQVDYVNTARNQVTLKMIPRIDYSRTRGTPRTAEDQEKRKRKRKPPQKLFIADEVRSIGGELNQDG----DFIIFENNRYRGGXLYKTLAMSAVVSEGIKPTLQELEKFEAVPEDVEL 274          
BLAST of mRNA_M-pyrifera_M_contig120745.4272.1 vs. uniprot
Match: A0A2B4SYR4_STYPI (Transcription elongation factor SPT5 n=2 Tax=Pocilloporidae TaxID=46729 RepID=A0A2B4SYR4_STYPI)

HSP 1 Score: 84.0 bits (206), Expect = 7.570e-16
Identity = 47/150 (31.33%), Postives = 83/150 (55.33%), Query Frame = 0
Query:    1 MVGVLKVPKNNIILSAGNWVRIKKGMHKGDLAQILSVGEDQGSALVKFVPRLDLSNVGRRAGS----GVKRKRLTRVQQKMFDREELEQMGAEVADSNYCGIDCVAFKSHRFVGGFQIKNMALKSLDIMGVVPSPNELQKFQEKNEEEDL 146
            M  V++V K  + +    WVR+K+G++K DLAQ+  V   +    +K +PR+D + +   A S    G KRK+  +  QK+FD + +  +G E+        D + F+  R+ GGF  K +A+ ++ + G+ P+  EL+KF+   E+ +L
Sbjct:  236 MTDVMRVVKEVVSVKPRQWVRLKRGIYKDDLAQVDFVNTARNQVTLKMIPRIDYTRMRGLAKSAEDAGEKRKKKRKPPQKLFDADSIRGIGGEIGQDG----DFMIFEGSRYRGGFMYKTLAMSAIVVEGIKPTLLELEKFETSPEDVEL 381          
BLAST of mRNA_M-pyrifera_M_contig120745.4272.1 vs. uniprot
Match: A0A132AD79_SARSC (Transcription elongation factor SPT5 n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A132AD79_SARSC)

HSP 1 Score: 83.2 bits (204), Expect = 1.410e-15
Identity = 49/148 (33.11%), Postives = 79/148 (53.38%), Query Frame = 0
Query:    1 MVGVLKVPKNNIILSAGNWVRIKKGMHKGDLAQILSVGEDQGSALVKFVPRLDLSN------VGRRAGSGVKRKRLTRVQQKMFDREELEQMGAEVADSNYCGIDCVAFKSHRFVGGFQIKNMALKSLDIMGVVPSPNELQKFQEKNE 142
            M  VLKV K+   L  G WVR+K+G++K DLAQ+  V   Q    +K +PR+D +       V        K+KR  + + K+FD + +  +G EV +      D + F+S+R+  GF  K   + ++ + GV P+  EL++F+E  E
Sbjct:  264 MTEVLKVTKDTSNLKVGQWVRLKRGLYKDDLAQVDYVDATQNQVHLKLIPRVDYTKLRGALRVSNEDNDQQKKKRFKKPKAKLFDIDAIRSIGGEVTNDG----DFIIFESNRYRRGFLYKAFNMNAIQVDGVKPTLTELERFEEHPE 407          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120745.4272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1HSB7_KLENI2.560e-1735.42Transcription elongation factor SPT5 n=1 Tax=Klebs... [more]
A0A3S3Q223_9ACAR8.180e-1734.67DRB sensitivity-inducing factor large subunit (Fra... [more]
T1FU80_HELRO8.750e-1736.25Transcription elongation factor SPT5 n=1 Tax=Helob... [more]
A0A7D9IBC1_PARCT1.620e-1634.39Transcription elongation factor SPT5 n=3 Tax=Alcyo... [more]
UPI001F04CDA14.040e-1637.33transcription elongation factor SPT5-like n=1 Tax=... [more]
UPI001CF380ED4.080e-1633.33transcription elongation factor SPT5-like n=2 Tax=... [more]
A0A2R6XA60_MARPO5.590e-1634.87Transcription elongation factor SPT5 n=2 Tax=March... [more]
UPI000A2A7FF57.490e-1634.23transcription elongation factor SPT5 n=1 Tax=Exaip... [more]
A0A2B4SYR4_STYPI7.570e-1631.33Transcription elongation factor SPT5 n=2 Tax=Pocil... [more]
A0A132AD79_SARSC1.410e-1533.11Transcription elongation factor SPT5 n=1 Tax=Sarco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039659Transcription elongation factor SPT5PANTHERPTHR11125SUPPRESSOR OF TY 5coord: 1..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120745contigM-pyrifera_M_contig120745:43..519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120745.4272.1mRNA_M-pyrifera_M_contig120745.4272.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120745 19..519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120745.4272.1 ID=prot_M-pyrifera_M_contig120745.4272.1|Name=mRNA_M-pyrifera_M_contig120745.4272.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=159bp
MVGVLKVPKNNIILSAGNWVRIKKGMHKGDLAQILSVGEDQGSALVKFVP
RLDLSNVGRRAGSGVKRKRLTRVQQKMFDREELEQMGAEVADSNYCGIDC
VAFKSHRFVGGFQIKNMALKSLDIMGVVPSPNELQKFQEKNEEEDLASAA
SATNFQHRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039659SPT5