prot_M-pyrifera_M_contig12074.4270.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12074.4270.1
Unique Nameprot_M-pyrifera_M_contig12074.4270.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length388
Homology
BLAST of mRNA_M-pyrifera_M_contig12074.4270.1 vs. uniprot
Match: A0A6H5KN23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN23_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 8.280e-57
Identity = 174/415 (41.93%), Postives = 196/415 (47.23%), Query Frame = 0
Query:    1 MEEVLYGDYNGHMRPLRLMYFSLDSRCLVADHPESVQEEVESHFCPHCNALCTTPEAQSNGNRCLQCLACPCCGCVLAPSPVSLEPCAPQPPXXXXXXXXXXXXXXXXSAPEYCLQCLYCQWTSEALGLVASEPA--------------------------ALIKAVAAG-----------------EKLRDGDLKAVDALLAGMKRMEDSRVTGSGGGXXXXXXRSRTGSAVXXXXXXXXXXGRRA-GAESWLPA-----TPANATGPWKVADIEEAVSLRNEAVKAASRSVTPSGASTAAPASTAVTKKEAEAPPAPWSPRGDTDGPDPSLWALTSGQETAGVAERLESWGWVRGERVGGSGDDVTASVGAXXXXXXXXXXXSGSAAERREWPRRVRLRTRLGKRCRKDLEAG 366
            M EVLYGDYNG++RPL LMYFSLDSRCLVADHP SVQEEVESHFCPHC +   TP+A S  NRC  C  CPCC CVL PSPVSL+  A                    +   YCL+CLYCQWTSE  GLVA +PA                          AL++A                      + RD    A                  S          S T  AV             A G    LP+     TP     P KV+D+  AV+ R + V AASRSV       A P   A     A   P PW+ RGDTDGPDP+LW L+SG ETAG+AER+E   W    R          + G  XXXXXXXXXX          PRRVRLR RLGKRCRKDL  G
Sbjct:    1 MVEVLYGDYNGYLRPLSLMYFSLDSRCLVADHPRSVQEEVESHFCPHCTSFFRTPDAVSTENRCPHCFECPCCRCVLVPSPVSLDRSASS---------------FSSAGTSYCLRCLYCQWTSEDSGLVAQDPAGLAAXXXXXXXXXXXXXXXXXXXXXGALLEAAQQXXXXXXXXXXXXXXXXXXSRGRDRGRAAXXXXXXXXXXXXXXXDVDSSLFSSAASISSHTTRAVFAGCAVQVVRTLLAFGTCLQLPSFFFLLTPPL---PLKVSDLNNAVARRTQVVAAASRSV-------ALPQPPAAAGTPAAVSP-PWALRGDTDGPDPALWTLSSGHETAGLAERVEG-SWSSPPR---QSPPARGARGDGXXXXXXXXXXXXXXXXXXXVPRRVRLRARLGKRCRKDLALG 385          
BLAST of mRNA_M-pyrifera_M_contig12074.4270.1 vs. uniprot
Match: D7FRF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRF1_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 4.120e-44
Identity = 163/394 (41.37%), Postives = 187/394 (47.46%), Query Frame = 0
Query:    1 MEEVLYGDYNGHMRPLRLMYFSLDSRCLVADHPESVQEEVESHFCPHCNALCTTPEAQSNGNRCLQCLACPCCGCVLAPSPVSLEPCAPQPPXXXXXXXXXXXXXXXXSAPEYCLQCLYCQWTSEALGLVASEPAALIK---AVAAGEKLRDGDLKAVDALLAGMKRMEDSRVTGSGGGXXXXXXRSRTGSAVXXXXXXXXXXGRRAGAESWLPATPANAT---GPWK-VADIEEAVSLRNEAVKAASRSVTPSGASTAAPASTAVTKKEAEAPPAPWSPRGDTDGPDPSLWALTSGQETAGVAERLESWGWVRGERVGGSGDDVTASVGAXXXXXXXXXXXSGSAAERREWPRRVRLRTRLGKRCRKDLEAGRAGILIKATFNPLEGDSSGAK 387
            M EVLYGDYNG++RPL LMYFSLDSRCLVADHP SVQEEVESHFCPHC +   TP+A S  N                  P      + +                                T  AL    + P  L +   AVA G   R            G +R    R      G XXXXX                     A A  W+           GP + V+D++EAV+ R + V AASRSV       A P   A T   A   P PW+ R DT GPDP+LW L+SG ETAG+AER+E   W    R          +   XXXXXXXXXXX          PRRVRLR R+GKRCRKDL AGR GILIKATFNPL+GDSS AK
Sbjct:    1 MAEVLYGDYNGYLRPLSLMYFSLDSRCLVADHPRSVQEEVESHFCPHCTSFFRTPDAMSAENS----------------GPARTRASSHR--------------------------------TQRAL----APPRPLERRRVAVATGAARRWSSALCSRRPSKGKRRPPSERGRRRVEGAXXXXXXXXXXXXXVPGFAPGARTAVAAAAAKWIRRCSLRRRVRPGPGRHVSDLDEAVARRAQVVVAASRSV-------ALPRPPAATAAAAAVSP-PWALREDTTGPDPALWTLSSGHETAGLAERVEG-PWSSPPR---QSPPARGARXXXXXXXXXXXXXXXXXXXXXXVPRRVRLRARVGKRCRKDLAAGRTGILIKATFNPLDGDSSTAK 330          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12074.4270.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KN23_9PHAE8.280e-5741.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRF1_ECTSI4.120e-4441.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008603Dynactin subunit 4PFAMPF05502Dynactin_p62coord: 32..140
e-value: 4.4E-10
score: 39.0
IPR008603Dynactin subunit 4PANTHERPTHR13034DYNACTIN P62 SUBUNITcoord: 4..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12074contigM-pyrifera_M_contig12074:5413..7812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12074.4270.1mRNA_M-pyrifera_M_contig12074.4270.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12074 5413..7830 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12074.4270.1 ID=prot_M-pyrifera_M_contig12074.4270.1|Name=mRNA_M-pyrifera_M_contig12074.4270.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=388bp
MEEVLYGDYNGHMRPLRLMYFSLDSRCLVADHPESVQEEVESHFCPHCNA
LCTTPEAQSNGNRCLQCLACPCCGCVLAPSPVSLEPCAPQPPSSSSSCPS
SSPAGGGGSAPEYCLQCLYCQWTSEALGLVASEPAALIKAVAAGEKLRDG
DLKAVDALLAGMKRMEDSRVTGSGGGSGGTGGRSRTGSAVSGGGGGGGVG
GRRAGAESWLPATPANATGPWKVADIEEAVSLRNEAVKAASRSVTPSGAS
TAAPASTAVTKKEAEAPPAPWSPRGDTDGPDPSLWALTSGQETAGVAERL
ESWGWVRGERVGGSGDDVTASVGAGVGEGLGSRFGSGSAAERREWPRRVR
LRTRLGKRCRKDLEAGRAGILIKATFNPLEGDSSGAKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008603DCTN4