prot_M-pyrifera_M_contig120737.4268.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120737.4268.1
Unique Nameprot_M-pyrifera_M_contig120737.4268.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length157
Homology
BLAST of mRNA_M-pyrifera_M_contig120737.4268.1 vs. uniprot
Match: UPI001E4B4774 (glycoside hydrolase n=1 Tax=Propioniciclava soli TaxID=2775081 RepID=UPI001E4B4774)

HSP 1 Score: 60.8 bits (146), Expect = 7.440e-8
Identity = 43/126 (34.13%), Postives = 62/126 (49.21%), Query Frame = 0
Query:   25 VAWSSSDGVIWTGAMLPA-DPSGRSVGAVVGTDEGFVALAGREGETGTAIPPSMWHSTDGVSW--QRADTTGLPNDAVVTSLATVDMGLRQRIVAVGSVGALEEAPAAWFSDDGGITWTTASVPAP 147
            +AW+S+DG  W   ++   DP   SVG VVGT +GF+A+     E      P++W S DG++W  Q  +  G   D  V     V +G      A+ + G + E P  + S D G TW   +VP P
Sbjct:  136 IAWTSTDGQTWDRQLMTGLDPRRASVGEVVGTPDGFLAVGSLWNEVEQTTAPAVWRSADGITWEAQLLEGEGWLADIAVHDGTMVAVG-SHGFDAMTAEGRVRE-PLLFVSTDAGGTWARQAVPEP 259          
BLAST of mRNA_M-pyrifera_M_contig120737.4268.1 vs. uniprot
Match: A0A1N6SC86_9ACTN (Uncharacterized protein n=2 Tax=Micromonospora avicenniae TaxID=1198245 RepID=A0A1N6SC86_9ACTN)

HSP 1 Score: 55.5 bits (132), Expect = 4.790e-6
Identity = 53/153 (34.64%), Postives = 71/153 (46.41%), Query Frame = 0
Query:    9 VILGSDTTPGSTTATPVAWSSSDGVIWTGAMLPADPSGRSVGAVVGTDEGFVALAGREGETGTAIPPSMWHSTDGVS--WQRADTTGL--PNDAVVTSLATVDMGLRQRIVAVGSVGALEEAPAAWFSDDGGITWTTASVPAPPADHPLGAIA 157
            +++G+    G T  +P+AW+SSDGV W  A LPA P GR     V +  G V   G  G+   A   +     DG +  W+RA       P  AVV  L  V  GL    +AV   GA       W+SDD G +W   ++P   AD    A+A
Sbjct:  217 LVVGAVLPAGGTALSPLAWTSSDGVAWRRAELPA-PGGRGQAQRVVSVGGAVVAVGPVGDGFVAWRAAAEPVADGAAARWRRAGAFAAAGPGVAVVAGLTAVGSGL----LAVTRTGAGHRL---WYSDDLGGSWRPVTMPVAVADSGETAVA 361          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120737.4268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001E4B47747.440e-834.13glycoside hydrolase n=1 Tax=Propioniciclava soli T... [more]
A0A1N6SC86_9ACTN4.790e-634.64Uncharacterized protein n=2 Tax=Micromonospora avi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..155
e-value: 8.3E-6
score: 26.8
IPR036278Sialidase superfamilySUPERFAMILY50939Sialidasescoord: 5..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120737contigM-pyrifera_M_contig120737:8..478 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120737.4268.1mRNA_M-pyrifera_M_contig120737.4268.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120737 8..478 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120737.4268.1 ID=prot_M-pyrifera_M_contig120737.4268.1|Name=mRNA_M-pyrifera_M_contig120737.4268.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=157bp
MAESAGTIVILGSDTTPGSTTATPVAWSSSDGVIWTGAMLPADPSGRSVG
AVVGTDEGFVALAGREGETGTAIPPSMWHSTDGVSWQRADTTGLPNDAVV
TSLATVDMGLRQRIVAVGSVGALEEAPAAWFSDDGGITWTTASVPAPPAD
HPLGAIA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036278Sialidase_sf