prot_M-pyrifera_M_contig120728.4265.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120728.4265.1
Unique Nameprot_M-pyrifera_M_contig120728.4265.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length178
Homology
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A3C1KNQ7_9GAMM (Ribonucleoside-diphosphate reductase (Fragment) n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KNQ7_9GAMM)

HSP 1 Score: 348 bits (892), Expect = 2.250e-115
Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 0
Query:    1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 178
            +VVE NGLPL+QQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct:  240 NVVEINGLPLEQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 417          
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A359EPC5_9GAMM (Ribonucleoside-diphosphate reductase n=8 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A359EPC5_9GAMM)

HSP 1 Score: 348 bits (892), Expect = 1.910e-110
Identity = 175/178 (98.31%), Postives = 177/178 (99.44%), Query Frame = 0
Query:    1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 178
            +VVE NGLPL+QQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct:  748 NVVEINGLPLEQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 925          
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A2E7C2N9_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=2 Tax=Haliea TaxID=475794 RepID=A0A2E7C2N9_9GAMM)

HSP 1 Score: 332 bits (850), Expect = 1.530e-107
Identity = 167/178 (93.82%), Postives = 171/178 (96.07%), Query Frame = 0
Query:    1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 178
            +VVE NGLPL QQRHEIAYKRRHGMGFLGLGSTITMLGM YGDEDSL FTEEVAREMALVGWEQ VQLAEEKGPAPIMDDLFEVTPEMLAARPEM+RDGIAVG+RLPGRVLHARYSRYMQRVA  APELVER+AERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct:  373 NVVEINGLPLAQQRHEIAYKRRHGMGFLGLGSTITMLGMSYGDEDSLAFTEEVAREMALVGWEQAVQLAEEKGPAPIMDDLFEVTPEMLAARPEMRRDGIAVGERLPGRVLHARYSRYMQRVAEAAPELVERIAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 550          
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A2N5Y7V7_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y7V7_9GAMM)

HSP 1 Score: 303 bits (776), Expect = 1.630e-96
Identity = 149/178 (83.71%), Postives = 166/178 (93.26%), Query Frame = 0
Query:    1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 178
            +VV+ NGLPL+QQ+HEI YKRRHGMGFLGLGSTITML MCYGD+ SL FTE+VAREMALVGW+QG++LA EKGPAPIM+DLFEVTPEMLA RP+M RDGIAVGD++PG+VL ARYS YMQRVA VAPELVE++A +GARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct:  373 NVVDINGLPLEQQQHEITYKRRHGMGFLGLGSTITMLRMCYGDDASLEFTEQVAREMALVGWQQGIELAAEKGPAPIMEDLFEVTPEMLATRPDMVRDGIAVGDQVPGKVLLARYSHYMQRVAEVAPELVEQLASKGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 550          
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A3C7VW87_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A3C7VW87_9GAMM)

HSP 1 Score: 301 bits (771), Expect = 9.420e-96
Identity = 148/178 (83.15%), Postives = 162/178 (91.01%), Query Frame = 0
Query:    1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 178
            +VVE NGLPL++QRHEI YKRRHGMGFLGLGST+TMLGM YGDE+S+ FTE VA+EMAL GWEQ  +LAEEKGPAPIMDD FEVTP M+ ARPEM RDGI VGD+LPGRVLHARYSRYMQRVA VAP+LV+++A  GARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct:  375 NVVEINGLPLEEQRHEITYKRRHGMGFLGLGSTLTMLGMRYGDEESVAFTERVAKEMALAGWEQAAELAEEKGPAPIMDDEFEVTPAMMDARPEMARDGIKVGDKLPGRVLHARYSRYMQRVAEVAPQLVDKLAANGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 552          
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A095VTS6_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=2 Tax=Bacteria TaxID=2 RepID=A0A095VTS6_9GAMM)

HSP 1 Score: 295 bits (755), Expect = 2.140e-93
Identity = 145/178 (81.46%), Postives = 162/178 (91.01%), Query Frame = 0
Query:    1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 178
            +VVE NGLPL++QRHEI YKRRHGMGFLGLGST+TMLGM YGD++S+ FTE VAREMA+ GWEQ  +LA+EKGPAPIMDD F VT  ML ARPEM RDGI VGD++PGRVLHARYSRYMQR+A VAP+LV+R+AE+GARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR
Sbjct:  373 NVVEINGLPLEEQRHEITYKRRHGMGFLGLGSTLTMLGMRYGDDESVAFTERVAREMAISGWEQAAELADEKGPAPIMDDEFVVTTAMLDARPEMARDGIKVGDKVPGRVLHARYSRYMQRMAEVAPQLVDRLAEQGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 550          
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A661BLS3_9GAMM (Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BLS3_9GAMM)

HSP 1 Score: 275 bits (703), Expect = 3.230e-89
Identity = 135/178 (75.84%), Postives = 156/178 (87.64%), Query Frame = 0
Query:    1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 178
            +VVE NGLPL  QRHEI +KRRHGMG+LGLGST+TML M YGD+DSL FTE+V RE+A+VGWE  ++LAEEKGPAPIM++ F VTPEMLA RPEM  DG+ VG+R+ G+VLHARYSRYMQ +A   PELVER+AE GAR+THHSSIAPTGTISLSLANNASNG+EPSFAHHY+RNVIR
Sbjct:   56 NVVEINGLPLAPQRHEIEHKRRHGMGYLGLGSTVTMLRMKYGDQDSLEFTEKVTRELAMVGWEAALELAEEKGPAPIMNEEFTVTPEMLAKRPEMANDGLRVGERVKGKVLHARYSRYMQLIAKENPELVERLAEVGARYTHHSSIAPTGTISLSLANNASNGVEPSFAHHYSRNVIR 233          
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A0K0XWC6_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Wenzhouxiangella marina TaxID=1579979 RepID=A0A0K0XWC6_9GAMM)

HSP 1 Score: 283 bits (723), Expect = 1.170e-88
Identity = 141/178 (79.21%), Postives = 157/178 (88.20%), Query Frame = 0
Query:    1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 178
            +VVE NGLPL+QQR EI YKRRHGMGFLGLGST+TML M YG  DSL FTE VAREMA+ GWE G++LAEEKGPAPIM+D FEVT +ML  RPEM+ DG  VGD++PGRVLHARYSRYM++VA VAPELVE++AE GARFTHH+SIAPTGTISLSLANNASNGIEPSFAHHY RNVIR
Sbjct:  372 NVVEINGLPLEQQRKEIEYKRRHGMGFLGLGSTVTMLRMKYGQADSLEFTERVAREMAVAGWEVGLELAEEKGPAPIMNDEFEVTAQMLRQRPEMKADGFQVGDKVPGRVLHARYSRYMRKVAEVAPELVEKLAETGARFTHHTSIAPTGTISLSLANNASNGIEPSFAHHYNRNVIR 549          
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A5Q4GCU6_9GAMM (Vitamin B12-dependent ribonucleotide reductase n=1 Tax=Wenzhouxiangellaceae bacterium TaxID=2448046 RepID=A0A5Q4GCU6_9GAMM)

HSP 1 Score: 281 bits (719), Expect = 4.560e-88
Identity = 141/178 (79.21%), Postives = 155/178 (87.08%), Query Frame = 0
Query:    1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 178
            +VVE NGLPL++QR EI YKRRHGMGFLGLGST+TML   YG  DSL FTE VAREMA+ GWE  ++LAEEKGPAPIM D FEVTP+ML  RPEM RDG   GDR+PGR+LHARYSRYMQ+VAAVAPELV+R+AE GARFTHH+SIAPTGTISLSLANNASNGIEPSFAHHY RNVIR
Sbjct:  372 NVVEINGLPLEKQRREIEYKRRHGMGFLGLGSTLTMLRKQYGQGDSLEFTERVAREMAVAGWEVALELAEEKGPAPIMSDDFEVTPQMLRLRPEMLRDGYQPGDRVPGRILHARYSRYMQKVAAVAPELVDRLAETGARFTHHTSIAPTGTISLSLANNASNGIEPSFAHHYNRNVIR 549          
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Match: A0A382TRE5_9ZZZZ (RIBORED_LARGE domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382TRE5_9ZZZZ)

HSP 1 Score: 268 bits (686), Expect = 6.130e-88
Identity = 133/178 (74.72%), Postives = 151/178 (84.83%), Query Frame = 0
Query:    1 DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFTEEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGIAVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTGTISLSLANNASNGIEPSFAHHYARNVIR 178
            +VVE NGLPL +Q+ EI  KRRHGMG+LGLGSTITMLGM YGDEDS+ FTEEV + +ALVGW+ G+ LAEEKGPA IMD+ FEVT EML  RPEM  DG   GD + GRVLHARYSRYMQ++A   PELVE++AE+G RFTHH+SIAPTGTISLSLANNASNGIEPSFAHHY+RNVIR
Sbjct:   36 NVVEINGLPLPEQQSEIERKRRHGMGYLGLGSTITMLGMSYGDEDSVAFTEEVTKRLALVGWQAGLALAEEKGPAAIMDEDFEVTQEMLRLRPEMSEDGYQAGDSVKGRVLHARYSRYMQKIATEDPELVEQLAEKGCRFTHHTSIAPTGTISLSLANNASNGIEPSFAHHYSRNVIR 213          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120728.4265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1KNQ7_9GAMM2.250e-11598.31Ribonucleoside-diphosphate reductase (Fragment) n=... [more]
A0A359EPC5_9GAMM1.910e-11098.31Ribonucleoside-diphosphate reductase n=8 Tax=Gamma... [more]
A0A2E7C2N9_9GAMM1.530e-10793.82Vitamin B12-dependent ribonucleotide reductase n=2... [more]
A0A2N5Y7V7_9GAMM1.630e-9683.71Vitamin B12-dependent ribonucleotide reductase n=1... [more]
A0A3C7VW87_9GAMM9.420e-9683.15Vitamin B12-dependent ribonucleotide reductase n=1... [more]
A0A095VTS6_9GAMM2.140e-9381.46Vitamin B12-dependent ribonucleotide reductase n=2... [more]
A0A661BLS3_9GAMM3.230e-8975.84Ribonucleoside-diphosphate reductase, adenosylcoba... [more]
A0A0K0XWC6_9GAMM1.170e-8879.21Vitamin B12-dependent ribonucleotide reductase n=1... [more]
A0A5Q4GCU6_9GAMM4.560e-8879.21Vitamin B12-dependent ribonucleotide reductase n=1... [more]
A0A382TRE5_9ZZZZ6.130e-8874.72RIBORED_LARGE domain-containing protein (Fragment)... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.70.20coord: 1..178
e-value: 2.4E-29
score: 104.2
NoneNo IPR availablePANTHERPTHR43371FAMILY NOT NAMEDcoord: 1..176
NoneNo IPR availableSUPERFAMILY51998PFL-like glycyl radical enzymescoord: 3..177
IPR000788Ribonucleotide reductase large subunit, C-terminalPFAMPF02867Ribonuc_red_lgCcoord: 2..177
e-value: 9.1E-30
score: 103.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120728contigM-pyrifera_M_contig120728:3..536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120728.4265.1mRNA_M-pyrifera_M_contig120728.4265.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120728 3..536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120728.4265.1 ID=prot_M-pyrifera_M_contig120728.4265.1|Name=mRNA_M-pyrifera_M_contig120728.4265.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp
DVVESNGLPLQQQRHEIAYKRRHGMGFLGLGSTITMLGMCYGDEDSLTFT
EEVAREMALVGWEQGVQLAEEKGPAPIMDDLFEVTPEMLAARPEMQRDGI
AVGDRLPGRVLHARYSRYMQRVAAVAPELVERVAERGARFTHHSSIAPTG
TISLSLANNASNGIEPSFAHHYARNVIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000788RNR_lg_C