prot_M-pyrifera_M_contig120609.4244.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120609.4244.1
Unique Nameprot_M-pyrifera_M_contig120609.4244.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length77
Homology
BLAST of mRNA_M-pyrifera_M_contig120609.4244.1 vs. uniprot
Match: A0A3R7A847_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7A847_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 5.470e-7
Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    3 LTHLELSYTEHVGDTVLASLGRHCPRLQLLGLNGCFELTDVSMKALANSCPSL 55
            LT L L++T  V D  L +LG+HCP L++L LNGC ++TDV +  L    P L
Sbjct:  380 LTRLNLTHTHGVSDAGLMALGKHCPHLEVLTLNGCCDITDVGVTHLVQYVPVL 432          
BLAST of mRNA_M-pyrifera_M_contig120609.4244.1 vs. uniprot
Match: W4H3S9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3S9_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 5.510e-7
Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 0
Query:    3 LTHLELSYTEHVGDTVLASLGRHCPRLQLLGLNGCFELTDVSMKALANSCPSL 55
            LT L L++T  V D  L +LG+HCP L++L LNGC ++TDV +  L    P L
Sbjct:  377 LTRLNLTHTHGVSDAGLMALGKHCPHLEVLTLNGCCDITDVGVTHLVQYVPVL 429          
BLAST of mRNA_M-pyrifera_M_contig120609.4244.1 vs. uniprot
Match: UPI001CA7D2F7 (uncharacterized protein LOC122508626 isoform X1 n=2 Tax=Leptopilina heterotoma TaxID=63436 RepID=UPI001CA7D2F7)

HSP 1 Score: 51.2 bits (121), Expect = 1.250e-5
Identity = 26/76 (34.21%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    2 NLTHLE-LSYTEH--VGDTVLASLGRHCPRLQLLGLNGCFELTDVSMKALANSCPSLRSLVVEGLESISGEGLGAV 74
            N THLE L ++++  V D +L+++G +CP+L +L +N CF+++DV +  +A   P L+ L +  L  ++G+ L  +
Sbjct:  867 NFTHLERLDFSDNAIVTDEILSAIGANCPKLNVLLINRCFQVSDVGIGGIA-LLPELKHLSMNDLSKVTGKQLSTL 941          
BLAST of mRNA_M-pyrifera_M_contig120609.4244.1 vs. uniprot
Match: A0A835XK83_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XK83_9CHLO)

HSP 1 Score: 50.4 bits (119), Expect = 2.220e-5
Identity = 28/76 (36.84%), Postives = 42/76 (55.26%), Query Frame = 0
Query:    1 PNLTHLELSYTEHVGDTVLASLGRHCPRLQLLGLNGCFELTDVSMKALANSC-PSLRSLVVEGLESISGEGLGAVL 75
            P L     S  E + D  + ++    P L+L+G+ GC +LTD S+KA+A  C P+L +L    L  +S  GL A+L
Sbjct:  253 PGLLEFGFSGFEALRDGDVDTIASLLPGLRLIGIGGCLDLTDASLKAIAAHCGPTLEALYASDLPLVSPAGLDALL 328          
BLAST of mRNA_M-pyrifera_M_contig120609.4244.1 vs. uniprot
Match: A0A834N9T1_VESGE (RRM domain-containing protein n=4 Tax=Vespula TaxID=7451 RepID=A0A834N9T1_VESGE)

HSP 1 Score: 50.1 bits (118), Expect = 3.120e-5
Identity = 24/73 (32.88%), Postives = 41/73 (56.16%), Query Frame = 0
Query:    2 NLTHLELSYTEHVGDTVLASLGRHCPRLQLLGLNGCFELTDVSMKALANSCPSLRSLVVEGLESISGEGLGAV 74
            NL  L L     + D  L +L   C +L  L +NGC+ +TD  ++A+A + P L +L++  LE ++  GL ++
Sbjct:  395 NLEILRLIQNGFINDDFLIALASKCKQLIYLDINGCYNVTDTGLQAVA-TLPKLETLIINNLEKVTAVGLDSM 466          
BLAST of mRNA_M-pyrifera_M_contig120609.4244.1 vs. uniprot
Match: A0A1B6H144_9HEMI (RRM domain-containing protein n=2 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6H144_9HEMI)

HSP 1 Score: 48.9 bits (115), Expect = 8.080e-5
Identity = 26/71 (36.62%), Postives = 39/71 (54.93%), Query Frame = 0
Query:    1 PNLTHLELSYTEHVGDTVLASLGRHCPRLQLLGLNGCFELTDVSMKALANSCPSLRSLVVEGLESISGEGL 71
            PNL  L ++   H+ +  LA LGR CPRL+ L ++GC + +D  + +L   C  L  L +     ISG+ L
Sbjct:  318 PNLEILRIANV-HLANRSLAHLGRRCPRLKELVMDGCSKFSDADLMSLLPKCKKLDYLELSNTNGISGKCL 387          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120609.4244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A3R7A847_9STRA5.470e-747.17Uncharacterized protein n=12 Tax=Aphanomyces astac... [more]
W4H3S9_9STRA5.510e-747.17Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI001CA7D2F71.250e-534.21uncharacterized protein LOC122508626 isoform X1 n=... [more]
A0A835XK83_9CHLO2.220e-536.84Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A834N9T1_VESGE3.120e-532.88RRM domain-containing protein n=4 Tax=Vespula TaxI... [more]
A0A1B6H144_9HEMI8.080e-536.62RRM domain-containing protein n=2 Tax=Cuerna arida... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 1..25
e-value: 110.0
score: 6.4
coord: 52..77
e-value: 29.0
score: 10.9
coord: 26..51
e-value: 7.5E-4
score: 28.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..77
e-value: 2.2E-17
score: 64.5
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 2..73
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 1..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120609contigM-pyrifera_M_contig120609:201..512 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120609.4244.1mRNA_M-pyrifera_M_contig120609.4244.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120609 201..512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120609.4244.1 ID=prot_M-pyrifera_M_contig120609.4244.1|Name=mRNA_M-pyrifera_M_contig120609.4244.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
PNLTHLELSYTEHVGDTVLASLGRHCPRLQLLGLNGCFELTDVSMKALAN
SCPSLRSLVVEGLESISGEGLGAVLLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR032675LRR_dom_sf