prot_M-pyrifera_M_contig120471.4226.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig120471.4226.1
Unique Name	prot_M-pyrifera_M_contig120471.4226.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	175

Homology

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BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot
Match: A0A6V1NB11_HETAK (Ribonuclease n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NB11_HETAK)

HSP 1 Score: 190 bits (483), Expect = 3.440e-57
Identity = 97/177 (54.80%), Postives = 121/177 (68.36%), Query Frame = 0

Query:    1 YADSKALTSDRRGELFEGLRSCGKVGWVIHSISAEEISGSMLLTEPTSLNTLSHLSAESLVRSVEESGVVVKHVYVDTVGDPGAYQAKLTRAFGSRLTFTVAKKADATYPVVGAASIVAKVTRDRAMEDMKFRE--PGFTSTLPLGSGYPGDEITKAWLQAHCDPVFGWPSVTRFSW 175
            + DSKALT+D+R  LF+ ++    VGWVI SISAEEIS  ML   P SLN +S+ +A  ++++  + GV +  VYVDTVGDP AYQ +LTR F   + FTVAKKAD+ Y  V AASI AKVTRDR +E   F E   GF     +GSGYP DE   AWL+AH DPVFG+P++ RFSW
Sbjct:   71 FDDSKALTADQRASLFDKIKETPSVGWVIRSISAEEISNQMLRKVPVSLNIISYAAAMQMIQTALDDGVNITKVYVDTVGDPAAYQERLTRHFKGAIDFTVAKKADSLYKTVSAASICAKVTRDRLLEGWVFPEGPAGFAGGAAMGSGYPSDEKCVAWLRAHVDPVFGFPNIVRFSW 247

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BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot
Match: D8LRP9_ECTSI (Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP9_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 2.670e-54
Identity = 94/177 (53.11%), Postives = 119/177 (67.23%), Query Frame = 0

Query:    1 YADSKALTSDRRGELFEGLRSCGKVGWVIHSISAEEISGSMLLTEPTSLNTLSHLSAESLVRSVEESGVVVKHVYVDTVGDPGAYQAKLTRAFGSRLTFTVAKKADATYPVVGAASIVAKVTRDRAMEDMKFREPG--FTSTLPLGSGYPGDEITKAWLQAHCDPVFGWPSVTRFSW 175
            + DSKALTSD+R  LF+ +    +VGWV+  ISA E+S  M    P SLN +SH +A  L+R+V+  GV V  VYVDTVGDP  YQ+KL + FG  + F VAKKAD+ Y    AASIVAKVTRDR +E  ++ EP   F+     GSGYPGDE  K WL+++ DPVFG+P + RFSW
Sbjct:   86 FDDSKALTSDQRTSLFDRIDRTPEVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAELIRAVQARGVKVTQVYVDTVGDPAFYQSKLEKEFGKGIKFVVAKKADSLYKTASAASIVAKVTRDRIVEGWQWSEPNLDFSEDRKYGSGYPGDEKCKKWLESNVDPVFGFPDICRFSW 262

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BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot
Match: A0A2K1JL69_PHYPA (Ribonuclease n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JL69_PHYPA)

HSP 1 Score: 177 bits (449), Expect = 2.540e-52
Identity = 91/175 (52.00%), Postives = 117/175 (66.86%), Query Frame = 0

Query:    1 YADSKALTSDRRGELFEGLRSCGKVGWVIHSISAEEISGSMLLTEPTSLNTLSHLSAESLVRSVEESGVVVKHVYVDTVGDPGAYQAKLTRAFGSRLTFTVAKKADATYPVVGAASIVAKVTRDRAMEDMKFREPGFTSTLPLGSGYPGDEITKAWLQAHCDPVFGWPSVTRFSW 175
            +ADSKALT  +R EL+E L++   +GW +  I  +++S  ML     +LNT+S  SA  L+R+  + GV +  V+VDTVGDPG YQ  LT  F   + FTV+KKAD+ +P+V AASIVAKVTRDRA+ D    E G   T   GSGYPGD  TK WL+ H DPVFG+PS+ RFSW
Sbjct:   51 FADSKALTESKREELYENLKADDLMGWAVDVIDPKDLSAKMLRRAKVNLNTISFESAMGLIRNTLDLGVFLTEVFVDTVGDPGKYQDMLTTKFPG-IRFTVSKKADSLFPIVSAASIVAKVTRDRALRDWVVDETGREVTRGFGSGYPGDPETKTWLEDHVDPVFGFPSLVRFSW 224

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BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot
Match: A0A0A9PJ00_ARUDO (Ribonuclease n=2 Tax=PACMAD clade TaxID=147370 RepID=A0A0A9PJ00_ARUDO)

HSP 1 Score: 172 bits (436), Expect = 6.970e-51
Identity = 87/175 (49.71%), Postives = 113/175 (64.57%), Query Frame = 0

Query:    1 YADSKALTSDRRGELFEGLRSCGKVGWVIHSISAEEISGSMLLTEPTSLNTLSHLSAESLVRSVEESGVVVKHVYVDTVGDPGAYQAKLTRAFGSRLTFTVAKKADATYPVVGAASIVAKVTRDRAMEDMKFREPGFTSTLPLGSGYPGDEITKAWLQAHCDPVFGWPSVTRFSW 175
            +ADSK L  ++R ELFE L++   +GW +  I  +E+S  ML     +LN +SH SA  LV+ V + G+++  VY+DTVGDP  Y+ KLT  F   + F VAKKAD  YPVV  ASIVAKVTRDRA+ +  F E      +  GSGYPGD  TK WL+ H  PVFG+P++ RFSW
Sbjct:   54 FADSKTLKEEQREELFESLKANSSIGWEVDVICPKELSAKMLKRSKVNLNEISHNSAMGLVKKVIDMGILLAEVYIDTVGDPEKYRIKLTEKFPG-IKFVVAKKADGLYPVVSGASIVAKVTRDRALRNWMFDETALNMHMNTGSGYPGDPGTKQWLEDHKHPVFGFPTLVRFSW 227

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BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot
Match: UPI00125E3104 (ribonuclease H2 subunit A n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E3104)

HSP 1 Score: 173 bits (439), Expect = 1.190e-50
Identity = 91/175 (52.00%), Postives = 112/175 (64.00%), Query Frame = 0

Query:    1 YADSKALTSDRRGELFEGLRSCGKVGWVIHSISAEEISGSMLLTEPTSLNTLSHLSAESLVRSVEESGVVVKHVYVDTVGDPGAYQAKLTRAFGSRLTFTVAKKADATYPVVGAASIVAKVTRDRAMEDMKFREPGFTSTLPLGSGYPGDEITKAWLQAHCDPVFGWPSVTRFSW 175
            +ADSK L  ++R ELFE L++ G +GW +  I   ++S  ML     +LN +SH SA  LVR   + GV++  VYVDTVGDP  Y+ KL+  F S + F VAKKAD+ YPVV  ASIVAKVTRDRA+ D  F E         GSGYPGD  TKAWL  H   VFG+PS+ RFSW
Sbjct:   51 FADSKTLKEEKREELFEELKTNGSIGWAVDVIDPRDLSAKMLKKNKINLNEISHESAMGLVRRALDMGVLLSEVYVDTVGDPDKYRLKLSERFPS-IKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWVFDETAENMNRVFGSGYPGDPDTKAWLDHHKHLVFGFPSLVRFSW 224

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BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot
Match: A0A4U6U1U3_SETVI (Ribonuclease n=2 Tax=Setaria viridis TaxID=4556 RepID=A0A4U6U1U3_SETVI)

HSP 1 Score: 172 bits (436), Expect = 3.660e-50
Identity = 88/175 (50.29%), Postives = 113/175 (64.57%), Query Frame = 0

Query:    1 YADSKALTSDRRGELFEGLRSCGKVGWVIHSISAEEISGSMLLTEPTSLNTLSHLSAESLVRSVEESGVVVKHVYVDTVGDPGAYQAKLTRAFGSRLTFTVAKKADATYPVVGAASIVAKVTRDRAMEDMKFREPGFTSTLPLGSGYPGDEITKAWLQAHCDPVFGWPSVTRFSW 175
            +ADSK L  ++R ELFE L+    +GW +  I  +++S  ML     +LN +SH SA  LVR V + GV++  VY+DTVGDP  Y+ KLT  F   + F VAKKAD+ YPVV  ASIVAKVTRDRA+ +  F E      +  GSGYPGD  TK WL+ H  PVFG+P++ RFSW
Sbjct:   54 FADSKTLKEEQREELFESLKVNSSIGWEVDVICPKDLSAKMLKKSKVNLNEISHNSAMGLVRKVLDMGVLLAEVYIDTVGDPEKYRIKLTEKFPG-IKFVVAKKADSLYPVVSGASIVAKVTRDRALRNWVFDETALNMHMKTGSGYPGDPDTKQWLEDHKHPVFGFPTLVRFSW 227

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BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot
Match: UPI000D2F4130 (ribonuclease H2 subunit A isoform X2 n=1 Tax=Medicago truncatula TaxID=3880 RepID=UPI000D2F4130)

HSP 1 Score: 170 bits (431), Expect = 4.720e-50
Identity = 88/175 (50.29%), Postives = 115/175 (65.71%), Query Frame = 0

Query:    1 YADSKALTSDRRGELFEGLRSCGKVGWVIHSISAEEISGSMLLTEPTSLNTLSHLSAESLVRSVEESGVVVKHVYVDTVGDPGAYQAKLTRAFGSRLTFTVAKKADATYPVVGAASIVAKVTRDRAMEDMKFREPGFTSTLPLGSGYPGDEITKAWLQAHCDPVFGWPSVTRFSW 175
            +ADSK L  ++R ELFE L++   +GW +  I  +E+S  ML     +LN +SH SA  LV  V + GV++  VY+DTVGDPG Y+AKL++ F S + F VAKKAD+ YPVV  ASIVAKVTRDRA+ D    E         GSGYPGD  TK+WL+ H   +FG+P++ RFSW
Sbjct:   52 FADSKTLKEEKREELFEILKANDSIGWAVDVIDPKELSSKMLKKNKINLNEISHDSAMGLVDRVLKMGVLLTEVYIDTVGDPGKYEAKLSKNFPS-IKFVVAKKADSLYPVVSGASIVAKVTRDRAIRDWVLDESADNIHRKFGSGYPGDPATKSWLEDHKHSIFGFPTLVRFSW 225

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BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot
Match: K3Y905_SETIT (Ribonuclease n=20 Tax=Panicoideae TaxID=147369 RepID=K3Y905_SETIT)

HSP 1 Score: 172 bits (435), Expect = 5.170e-50
Identity = 87/175 (49.71%), Postives = 113/175 (64.57%), Query Frame = 0

Query:    1 YADSKALTSDRRGELFEGLRSCGKVGWVIHSISAEEISGSMLLTEPTSLNTLSHLSAESLVRSVEESGVVVKHVYVDTVGDPGAYQAKLTRAFGSRLTFTVAKKADATYPVVGAASIVAKVTRDRAMEDMKFREPGFTSTLPLGSGYPGDEITKAWLQAHCDPVFGWPSVTRFSW 175
            +ADSK L  ++R ELFE L+    +GW +  I  +++S  ML     +LN +SH SA  LVR V + G+++  VY+DTVGDP  Y+ KLT  F   + F VAKKAD+ YPVV  ASIVAKVTRDRA+ +  F E      +  GSGYPGD  TK WL+ H  PVFG+P++ RFSW
Sbjct:   54 FADSKTLKEEQREELFESLKVNSSIGWEVDVICPKDLSAKMLKKSKVNLNEISHNSAMGLVRKVLDMGILLAEVYIDTVGDPEKYRIKLTEKFPG-IKFVVAKKADSLYPVVSGASIVAKVTRDRALRNWVFDETALNMHMKTGSGYPGDPDTKQWLEDHKHPVFGFPTLVRFSW 227

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BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot
Match: A0A7J7C5I8_TRIWF (Ribonuclease n=3 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C5I8_TRIWF)

HSP 1 Score: 171 bits (434), Expect = 6.560e-50
Identity = 91/175 (52.00%), Postives = 113/175 (64.57%), Query Frame = 0

Query:    1 YADSKALTSDRRGELFEGLRSCGKVGWVIHSISAEEISGSMLLTEPTSLNTLSHLSAESLVRSVEESGVVVKHVYVDTVGDPGAYQAKLTRAFGSRLTFTVAKKADATYPVVGAASIVAKVTRDRAMEDMKFREPGFTSTLPLGSGYPGDEITKAWLQAHCDPVFGWPSVTRFSW 175
            +ADSK L  ++R ELFE L++   +GW +  I   E+S  ML T   +LN +SH SA  LV  V + GV++  VYVDTVGDP  Y+ KL+  F S + F VAKKAD+ YPVV  ASIVAKVTRDRA+ D    E     T   GSGYPGD  TKAWL+ H   VFG+P++ RFSW
Sbjct:   51 FADSKTLKEEKREELFENLKADNSIGWAVDVIDPRELSAKMLKTNKINLNEISHGSAMGLVSRVLDMGVLLTEVYVDTVGDPEKYRLKLSEKFPS-IKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWVPDETAENITRNFGSGYPGDPETKAWLEHHKHSVFGFPTLVRFSW 224

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BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot
Match: A0A444XVR5_ARAHY (Ribonuclease n=3 Tax=Arachis TaxID=3817 RepID=A0A444XVR5_ARAHY)

HSP 1 Score: 171 bits (432), Expect = 1.380e-49
Identity = 87/175 (49.71%), Postives = 113/175 (64.57%), Query Frame = 0

Query:    1 YADSKALTSDRRGELFEGLRSCGKVGWVIHSISAEEISGSMLLTEPTSLNTLSHLSAESLVRSVEESGVVVKHVYVDTVGDPGAYQAKLTRAFGSRLTFTVAKKADATYPVVGAASIVAKVTRDRAMEDMKFREPGFTSTLPLGSGYPGDEITKAWLQAHCDPVFGWPSVTRFSW 175
            +ADSK L  D+R ELFE L+S   + W +  I   ++S  ML     +LN +SH SA  L+  V + GV++  VY+DTVGDPG Y+ KL++ F S + F VAKKAD+ YPVV  ASIVAKVTRDRA+ D    E         GSGYPGD  TK+WL+ H  P+FG+P++ RFSW
Sbjct:   51 FADSKTLKEDKREELFEALKSNDSLAWAVDVIDPRDLSAKMLQKNKINLNEISHDSAMGLIHRVLKLGVLLTEVYIDTVGDPGKYEVKLSKVFPS-IKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWVLDESVENMHRNFGSGYPGDPQTKSWLEDHKHPIFGFPTLVRFSW 224

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig120471.4226.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6V1NB11_HETAK	3.440e-57	54.80	Ribonuclease n=1 Tax=Heterosigma akashiwo TaxID=28...	[more]
D8LRP9_ECTSI	2.670e-54	53.11	Ribonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=D...	[more]
A0A2K1JL69_PHYPA	2.540e-52	52.00	Ribonuclease n=2 Tax=Physcomitrium patens TaxID=32...	[more]
A0A0A9PJ00_ARUDO	6.970e-51	49.71	Ribonuclease n=2 Tax=PACMAD clade TaxID=147370 Rep...	[more]
UPI00125E3104	1.190e-50	52.00	ribonuclease H2 subunit A n=2 Tax=Ipomoea TaxID=41...	[more]
A0A4U6U1U3_SETVI	3.660e-50	50.29	Ribonuclease n=2 Tax=Setaria viridis TaxID=4556 Re...	[more]
UPI000D2F4130	4.720e-50	50.29	ribonuclease H2 subunit A isoform X2 n=1 Tax=Medic...	[more]
K3Y905_SETIT	5.170e-50	49.71	Ribonuclease n=20 Tax=Panicoideae TaxID=147369 Rep...	[more]
A0A7J7C5I8_TRIWF	6.560e-50	52.00	Ribonuclease n=3 Tax=Tripterygium wilfordii TaxID=...	[more]
A0A444XVR5_ARAHY	1.380e-49	49.71	Ribonuclease n=3 Tax=Arachis TaxID=3817 RepID=A0A4...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024567	Ribonuclease HII/HIII domain	PFAM	PF01351	RNase_HII	coord: 2..175 e-value: 2.3E-31 score: 109.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..136 e-value: 4.9E-42 score: 145.9
IPR023160	Ribonuclease HII, helix-loop-helix cap domain superfamily	GENE3D	1.10.10.460		coord: 142..175 e-value: 3.2E-16 score: 60.6
None	No IPR available	PANTHER	PTHR10954:SF7	RIBONUCLEASE H2 SUBUNIT A	coord: 2..175
IPR001352	Ribonuclease HII/HIII	PANTHER	PTHR10954	RIBONUCLEASE H2 SUBUNIT A	coord: 2..175
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 2..175

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig120471	contig	M-pyrifera_M_contig120471:2..526 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig120471.4226.1	mRNA_M-pyrifera_M_contig120471.4226.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig120471 2..526 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig120471.4226.1 ID=prot_M-pyrifera_M_contig120471.4226.1|Name=mRNA_M-pyrifera_M_contig120471.4226.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
YADSKALTSDRRGELFEGLRSCGKVGWVIHSISAEEISGSMLLTEPTSLN
TLSHLSAESLVRSVEESGVVVKHVYVDTVGDPGAYQAKLTRAFGSRLTFT
VAKKADATYPVVGAASIVAKVTRDRAMEDMKFREPGFTSTLPLGSGYPGD
EITKAWLQAHCDPVFGWPSVTRFSW

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024567	RNase_HII/HIII_dom
IPR036397	RNaseH_sf
IPR023160	RNase_HII_hlx-loop-hlx_cap_dom
IPR001352	RNase_HII/HIII
IPR012337	RNaseH-like_sf