prot_M-pyrifera_M_contig120383.4203.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120383.4203.1
Unique Nameprot_M-pyrifera_M_contig120383.4203.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length125
Homology
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BLAST of mRNA_M-pyrifera_M_contig120383.4203.1 vs. uniprot
Match: A0A4Q5RHS7_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Cytophagaceae bacterium TaxID=2026729 RepID=A0A4Q5RHS7_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 4.510e-5
Identity = 38/120 (31.67%), Postives = 59/120 (49.17%), Query Frame = 0 
Query:   10 GATAVACGDLDGASAEDVVVGFESGRAVVYFNNNNGE-SFTPVVVRSEATPVIAVGIGRFNTDVHPDVIVAHT--DRIVYLPGTSTTSFGQPLTIRI---SDIKAAAVGDVNEDGRVDVV 123
            G  ++  GDL+G S  D++ G   G   V  N+  G    +P    +  + V  V +G  N D   DV  A+T  + +  L GT T + G   +      S + + A+GD+N+DGR+DVV
Sbjct:  190 GIQSITAGDLNGDSKPDIIFGASGGSVGVLLNSGTGTFPGSPTSYPTGGSSVQRVKVGDVNNDGKLDVATANTFENTVSILLGTGTGTLGTAASYSAGSNSGLTSVALGDLNKDGRLDVV 309
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120383.4203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A4Q5RHS7_9BACT4.510e-531.67T9SS type A sorting domain-containing protein n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR44103FAMILY NOT NAMEDcoord: 2..123
NoneNo IPR availableSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 11..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120383contigM-pyrifera_M_contig120383:41..415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120383.4203.1mRNA_M-pyrifera_M_contig120383.4203.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120383 41..415 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120383.4203.1 ID=prot_M-pyrifera_M_contig120383.4203.1|Name=mRNA_M-pyrifera_M_contig120383.4203.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
MHTLSKTAPGATAVACGDLDGASAEDVVVGFESGRAVVYFNNNNGESFTP
VVVRSEATPVIAVGIGRFNTDVHPDVIVAHTDRIVYLPGTSTTSFGQPLT
IRISDIKAAAVGDVNEDGRVDVVYL
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