prot_M-pyrifera_M_contig120164.4157.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120164.4157.1
Unique Nameprot_M-pyrifera_M_contig120164.4157.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length101
Homology
BLAST of mRNA_M-pyrifera_M_contig120164.4157.1 vs. uniprot
Match: A0A2P6NA83_9EUKA (Coiled-coil domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NA83_9EUKA)

HSP 1 Score: 67.0 bits (162), Expect = 8.800e-11
Identity = 42/116 (36.21%), Postives = 67/116 (57.76%), Query Frame = 0
Query:   11 SDDEILSQLPEYFYDPEVDVVERLLQSMP----EEGTDQ---------------------YLADLIKVRNRQHDIVNSQLSDRVMSNYDAFVQGMMKIKELGDDLKTTAVLCRNGR 101
            +D+E+L+ LP   +   +DVVE + +S+P    +E  D+                     YL   +K + R  D +NS+LS++VMSNY+AFV+GM +I ELG DL+ +A +C++GR
Sbjct:  808 TDEEVLASLPPEIFQENLDVVELIFRSIPKDYGQESDDRKAEDGKKYVAHVDPSMLMDEAYLELQLKEKERCLDAINSKLSNKVMSNYNAFVKGMTQIHELGMDLEQSAAVCKDGR 923          
BLAST of mRNA_M-pyrifera_M_contig120164.4157.1 vs. uniprot
Match: A0A5P1F0D2_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1F0D2_ASPOF)

HSP 1 Score: 61.6 bits (148), Expect = 6.790e-9
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 0
Query:   11 SDDEILSQLPEYFYDPEVDVVERLLQSMPEEGTDQ-YLADLIKVRNRQHDIVNSQLSDRVMSNYDAFVQGMMKIKELGDDLKTTAVLCRNGR 101
            S D ++ +L E FY+ + D V+ +L+++P E  D  Y  +   +R  Q D +  +LS  VM +++  V+GM  + EL  DLK   V+CRNGR
Sbjct:  121 SQDHVIEELEENFYEEDFDPVKYILENIPSEEADAFYFEEKATLRLLQLDRITERLSRHVMEHHEEMVKGMQLVMELEQDLKVANVICRNGR 212          
BLAST of mRNA_M-pyrifera_M_contig120164.4157.1 vs. uniprot
Match: A0A6I9R6R7_ELAGV (syndetin n=6 Tax=Magnoliopsida TaxID=3398 RepID=A0A6I9R6R7_ELAGV)

HSP 1 Score: 60.1 bits (144), Expect = 2.360e-8
Identity = 35/92 (38.04%), Postives = 53/92 (57.61%), Query Frame = 0
Query:   11 SDDEILSQLPEYFYDPEVDVVERLLQSMP-EEGTDQYLADLIKVRNRQHDIVNSQLSDRVMSNYDAFVQGMMKIKELGDDLKTTAVLCRNGR 101
            S D+++ +L E FY  + D V  +L+++P EE +  Y      +R  Q D +  QLS  VM +++  V+GM  + EL  DLK   V+CRNGR
Sbjct:  111 SQDQVIEELEEDFYQEDFDPVRHVLENIPSEENSATYFDQKSVLRLGQLDRIAEQLSRHVMEHHEEMVKGMQLVMELEQDLKVANVICRNGR 202          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120164.4157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2P6NA83_9EUKA8.800e-1136.21Coiled-coil domain-containing protein n=1 Tax=Plan... [more]
A0A5P1F0D2_ASPOF6.790e-936.96Uncharacterized protein n=2 Tax=Asparagus officina... [more]
A0A6I9R6R7_ELAGV2.360e-838.04syndetin n=6 Tax=Magnoliopsida TaxID=3398 RepID=A0... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019515Vacuolar protein sorting-associated protein 54, N-terminalPFAMPF10475Vps54_Ncoord: 17..101
e-value: 2.0E-16
score: 60.1
IPR040047SyndetinPANTHERPTHR13258UNCHARACTERIZEDcoord: 7..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120164contigM-pyrifera_M_contig120164:233..535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120164.4157.1mRNA_M-pyrifera_M_contig120164.4157.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120164 233..535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120164.4157.1 ID=prot_M-pyrifera_M_contig120164.4157.1|Name=mRNA_M-pyrifera_M_contig120164.4157.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
LTREQVGPKESDDEILSQLPEYFYDPEVDVVERLLQSMPEEGTDQYLADL
IKVRNRQHDIVNSQLSDRVMSNYDAFVQGMMKIKELGDDLKTTAVLCRNG
R
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019515VPS54_N
IPR040047VPS50