prot_M-pyrifera_M_contig120159.4155.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120159.4155.1
Unique Nameprot_M-pyrifera_M_contig120159.4155.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length136
Homology
BLAST of mRNA_M-pyrifera_M_contig120159.4155.1 vs. uniprot
Match: A0A7S4HSL1_9EUKA (Structural maintenance of chromosomes protein n=2 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HSL1_9EUKA)

HSP 1 Score: 189 bits (479), Expect = 6.040e-53
Identity = 94/129 (72.87%), Postives = 109/129 (84.50%), Query Frame = 0
Query:    7 GAVPRLMIQSIELTNFKSYAGKKTIGPFHQRFSAVVGPNGSGKSNLIDALLFVFGYRTKKLRLNKVSELIHNSNHGRGLQSAKVEVFFQQVLDREGPGEEYDILPDSKFSVSRVATSDNKSSYYINDKK 135
            G V RLMI+ I+L NFKSYAG K IGPFH RFSA+VGPNGSGKSNLIDALLFVFGYRTKKLRLNK+SELIHNSNHG GL  A VE+ FQQV+D     EEY+++P+S+  + RVAT+DNKS+YY+NDKK
Sbjct:   39 GHVTRLMIKKIKLHNFKSYAGVKEIGPFHHRFSAIVGPNGSGKSNLIDALLFVFGYRTKKLRLNKLSELIHNSNHGSGLPFASVEIQFQQVIDTNLELEEYEVVPNSEIRLKRVATADNKSTYYLNDKK 167          
BLAST of mRNA_M-pyrifera_M_contig120159.4155.1 vs. uniprot
Match: UPI000CDA6E2C (structural maintenance of chromosomes protein 4-like isoform X1 n=3 Tax=Cyanistes caeruleus TaxID=156563 RepID=UPI000CDA6E2C)

HSP 1 Score: 161 bits (407), Expect = 9.840e-47
Identity = 81/132 (61.36%), Postives = 104/132 (78.79%), Query Frame = 0
Query:    5 ERGAVPRLMIQSIELTNFKSYAGKKTIGPFHQRFSAVVGPNGSGKSNLIDALLFVFGYRTKKLRLNKVSELIHNSNHGRGLQSAKVEVFFQQVLDREGPGEEYDILPDSKFSVSRVATSDNKSSYYINDKKK 136
            E GA PRLMI  I   NFKSYAG++T+GPFH+RFS ++GPNGSGKSN+ID+LLFVFGYR +K+R  K+S LIHNS+  + +QS  VEV FQ++ D+EG  ++Y+++PDSKF VSR A  DN S+Y IN KKK
Sbjct:   82 EPGA-PRLMITHIVNQNFKSYAGEQTLGPFHKRFSCIIGPNGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCSVEVHFQKITDKEG--DDYEVIPDSKFCVSRTAYRDNSSTYCINGKKK 210          
BLAST of mRNA_M-pyrifera_M_contig120159.4155.1 vs. uniprot
Match: A0A7S1HG93_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HG93_HEMAN)

HSP 1 Score: 157 bits (396), Expect = 1.100e-46
Identity = 76/132 (57.58%), Postives = 100/132 (75.76%), Query Frame = 0
Query:    4 GERGAVPRLMIQSIELTNFKSYAGKKTIGPFHQRFSAVVGPNGSGKSNLIDALLFVFGYRTKKLRLNKVSELIHNSNHGRGLQSAKVEVFFQQVLDREGPGEEYDILPDSKFSVSRVATSDNKSSYYINDKK 135
            G  G   RL+I  + L NFKSYAG + IGPFH+RFS+VVGPNGSGKSN+IDA+LFVFG + K+LRLNKVSELIH S +   +   KV V F +++D+   GE+Y+++P ++  + RVATSDN+S YY+NDKK
Sbjct:   14 GGSGPPTRLVITHMTLENFKSYAGVQHIGPFHKRFSSVVGPNGSGKSNVIDAMLFVFGKKAKQLRLNKVSELIHKSENKMNIPFCKVSVHFNEIIDKNVDGEDYEVVPGTELKMCRVATSDNQSDYYLNDKK 145          
BLAST of mRNA_M-pyrifera_M_contig120159.4155.1 vs. uniprot
Match: A0A7K6BYR1_PTIVI (Structural maintenance of chromosomes protein 4 (Fragment) n=1 Tax=Ptilonorhynchus violaceus TaxID=28724 RepID=A0A7K6BYR1_PTIVI)

HSP 1 Score: 169 bits (427), Expect = 6.100e-46
Identity = 84/132 (63.64%), Postives = 107/132 (81.06%), Query Frame = 0
Query:    5 ERGAVPRLMIQSIELTNFKSYAGKKTIGPFHQRFSAVVGPNGSGKSNLIDALLFVFGYRTKKLRLNKVSELIHNSNHGRGLQSAKVEVFFQQVLDREGPGEEYDILPDSKFSVSRVATSDNKSSYYINDKKK 136
            E GA PRLMI  I   NFKSYAG++T+GPFH+RFS ++GPNGSGKSN+ID+LLFVFGYR +K+R  K+S LIHNS+  R +QS  VEV FQ+++D+EG  ++Y+++PDSKFSVSR A  DN S+YYIN KKK
Sbjct:   73 EPGA-PRLMITHIVNHNFKSYAGEQTLGPFHKRFSCIIGPNGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHRDIQSCSVEVHFQKIIDKEG--DDYEVIPDSKFSVSRTACRDNSSTYYINGKKK 201          
BLAST of mRNA_M-pyrifera_M_contig120159.4155.1 vs. uniprot
Match: A0A8D2MCW5_ZONAL (Structural maintenance of chromosomes protein 4 n=1 Tax=Zonotrichia albicollis TaxID=44394 RepID=A0A8D2MCW5_ZONAL)

HSP 1 Score: 156 bits (395), Expect = 1.080e-45
Identity = 80/132 (60.61%), Postives = 103/132 (78.03%), Query Frame = 0
Query:    5 ERGAVPRLMIQSIELTNFKSYAGKKTIGPFHQRFSAVVGPNGSGKSNLIDALLFVFGYRTKKLRLNKVSELIHNSNHGRGLQSAKVEVFFQQVLDREGPGEEYDILPDSKFSVSRVATSDNKSSYYINDKKK 136
            E GA PRLMI  I   NFKSYAG+K +GPFH+RFS +VGPNGSGKSN+ID+LLFVFGYR +K+R  K+S LIHNS+  + + S  V+V FQ+++D+EG  ++Y+++PDSKF VSR A  DN S+Y IN KKK
Sbjct:   57 EPGA-PRLMITHIVNHNFKSYAGEKILGPFHKRFSCIVGPNGSGKSNVIDSLLFVFGYRAQKIRSKKLSVLIHNSDGHQDIPSCSVQVHFQKIIDKEG--DDYEVIPDSKFCVSRTAYRDNSSTYCINGKKK 185          
BLAST of mRNA_M-pyrifera_M_contig120159.4155.1 vs. uniprot
Match: A0A852NXC8_9PASS (Structural maintenance of chromosomes protein 4 (Fragment) n=1 Tax=Atrichornis clamosus TaxID=449594 RepID=A0A852NXC8_9PASS)

HSP 1 Score: 167 bits (422), Expect = 2.880e-45
Identity = 82/132 (62.12%), Postives = 107/132 (81.06%), Query Frame = 0
Query:    5 ERGAVPRLMIQSIELTNFKSYAGKKTIGPFHQRFSAVVGPNGSGKSNLIDALLFVFGYRTKKLRLNKVSELIHNSNHGRGLQSAKVEVFFQQVLDREGPGEEYDILPDSKFSVSRVATSDNKSSYYINDKKK 136
            E GA PRLMI  I + NFKSYAG+KT+GPFH+RFS ++GPNGSGKSN+ID+LLFVFGYR +K+R  K+S LIHNS+  + +QS  VEV FQ+++D+EG  ++++++PDSKFSVSR A  DN S+YYIN  KK
Sbjct:   73 EPGA-PRLMIHHIVIQNFKSYAGEKTLGPFHKRFSCIIGPNGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCSVEVHFQKIIDKEG--DDFEVIPDSKFSVSRTAYRDNSSTYYINGIKK 201          
BLAST of mRNA_M-pyrifera_M_contig120159.4155.1 vs. uniprot
Match: A0A851UXJ8_9PASS (Structural maintenance of chromosomes protein 4 (Fragment) n=1 Tax=Elachura formosa TaxID=1463973 RepID=A0A851UXJ8_9PASS)

HSP 1 Score: 166 bits (420), Expect = 5.350e-45
Identity = 83/132 (62.88%), Postives = 105/132 (79.55%), Query Frame = 0
Query:    5 ERGAVPRLMIQSIELTNFKSYAGKKTIGPFHQRFSAVVGPNGSGKSNLIDALLFVFGYRTKKLRLNKVSELIHNSNHGRGLQSAKVEVFFQQVLDREGPGEEYDILPDSKFSVSRVATSDNKSSYYINDKKK 136
            E GA PRLMI  I   NFKSYAG++T+GPFH+RFS ++GPNGSGKSN+ID+LLFVFGYR +K+R  K+S LIHNS+  R +QS  VEV FQ++ D+EG  ++Y+++PDSKF VSR A  DN S+YYIN KKK
Sbjct:   73 EPGA-PRLMITHIVNQNFKSYAGEQTLGPFHKRFSCIIGPNGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHRDIQSCSVEVHFQKITDKEG--DDYEVIPDSKFCVSRTAYKDNSSTYYINGKKK 201          
BLAST of mRNA_M-pyrifera_M_contig120159.4155.1 vs. uniprot
Match: UPI000528A693 (structural maintenance of chromosomes protein 4-like n=5 Tax=Aves TaxID=8782 RepID=UPI000528A693)

HSP 1 Score: 155 bits (391), Expect = 6.360e-45
Identity = 77/132 (58.33%), Postives = 102/132 (77.27%), Query Frame = 0
Query:    5 ERGAVPRLMIQSIELTNFKSYAGKKTIGPFHQRFSAVVGPNGSGKSNLIDALLFVFGYRTKKLRLNKVSELIHNSNHGRGLQSAKVEVFFQQVLDREGPGEEYDILPDSKFSVSRVATSDNKSSYYINDKKK 136
            E GA PRLMI  I   NFKSYAG++T+GPFH+RFS ++GPNGSGKSN+ID++LFVFGYR +K+R  K+S LIHNS+    +QS  VE+ FQ+++D+EG  ++Y+++P+S F VSR A  DN S Y IN KKK
Sbjct:   73 EAGA-PRLMITHIVNQNFKSYAGEQTLGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHTDIQSCSVEIHFQKIIDKEG--DDYEVIPNSNFCVSRTAYRDNSSVYNINGKKK 201          
BLAST of mRNA_M-pyrifera_M_contig120159.4155.1 vs. uniprot
Match: A0A8C3UYH3_CATUS (Structural maintenance of chromosomes protein n=1 Tax=Catharus ustulatus TaxID=91951 RepID=A0A8C3UYH3_CATUS)

HSP 1 Score: 166 bits (419), Expect = 7.290e-45
Identity = 83/132 (62.88%), Postives = 105/132 (79.55%), Query Frame = 0
Query:    5 ERGAVPRLMIQSIELTNFKSYAGKKTIGPFHQRFSAVVGPNGSGKSNLIDALLFVFGYRTKKLRLNKVSELIHNSNHGRGLQSAKVEVFFQQVLDREGPGEEYDILPDSKFSVSRVATSDNKSSYYINDKKK 136
            E GA PRLMI  I   NFKSYAG++T+GPFH+RFS ++GPNGSGKSN+ID+LLFVFGYR +K+R  K+S LIHNS+  R +QS  VEV FQ++ D+EG  ++Y+++PDSKF VSR A  DN S+YYIN KKK
Sbjct:   65 EPGA-PRLMITHIVNQNFKSYAGEQTLGPFHKRFSCIIGPNGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHRDIQSCSVEVHFQKITDKEG--DDYEVIPDSKFCVSRTAYRDNSSTYYINGKKK 193          
BLAST of mRNA_M-pyrifera_M_contig120159.4155.1 vs. uniprot
Match: A0A7K7IM73_LOXCU (Structural maintenance of chromosomes protein 4 (Fragment) n=32 Tax=Passeriformes TaxID=9126 RepID=A0A7K7IM73_LOXCU)

HSP 1 Score: 164 bits (416), Expect = 1.850e-44
Identity = 83/132 (62.88%), Postives = 104/132 (78.79%), Query Frame = 0
Query:    5 ERGAVPRLMIQSIELTNFKSYAGKKTIGPFHQRFSAVVGPNGSGKSNLIDALLFVFGYRTKKLRLNKVSELIHNSNHGRGLQSAKVEVFFQQVLDREGPGEEYDILPDSKFSVSRVATSDNKSSYYINDKKK 136
            E GA PRLMI  I   NFKSYAG+KT+GPFH+RFS +VGPNGSGKSN+ID+LLFVFGYR +K+R  K+S LIHNS+  + + S  VEV FQ++ D+EG  ++Y+++PDSKF VSR A  DN S+YYIN KKK
Sbjct:   73 EPGA-PRLMITHIVNQNFKSYAGEKTLGPFHKRFSCIVGPNGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHKDISSCSVEVHFQKITDKEG--DDYEVIPDSKFCVSRTAYRDNSSTYYINGKKK 201          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120159.4155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4HSL1_9EUKA6.040e-5372.87Structural maintenance of chromosomes protein n=2 ... [more]
UPI000CDA6E2C9.840e-4761.36structural maintenance of chromosomes protein 4-li... [more]
A0A7S1HG93_HEMAN1.100e-4657.58Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7K6BYR1_PTIVI6.100e-4663.64Structural maintenance of chromosomes protein 4 (F... [more]
A0A8D2MCW5_ZONAL1.080e-4560.61Structural maintenance of chromosomes protein 4 n=... [more]
A0A852NXC8_9PASS2.880e-4562.12Structural maintenance of chromosomes protein 4 (F... [more]
A0A851UXJ8_9PASS5.350e-4562.88Structural maintenance of chromosomes protein 4 (F... [more]
UPI000528A6936.360e-4558.33structural maintenance of chromosomes protein 4-li... [more]
A0A8C3UYH3_CATUS7.290e-4562.88Structural maintenance of chromosomes protein n=1 ... [more]
A0A7K7IM73_LOXCU1.850e-4462.88Structural maintenance of chromosomes protein 4 (F... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 13..136
e-value: 5.5E-32
score: 113.5
NoneNo IPR availablePANTHERPTHR43939FAMILY NOT NAMEDcoord: 11..135
NoneNo IPR availablePANTHERPTHR43939:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 4coord: 11..135
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 13..135
e-value: 2.6E-35
score: 121.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120159contigM-pyrifera_M_contig120159:3..497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120159.4155.1mRNA_M-pyrifera_M_contig120159.4155.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120159 3..497 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120159.4155.1 ID=prot_M-pyrifera_M_contig120159.4155.1|Name=mRNA_M-pyrifera_M_contig120159.4155.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp
SAHGERGAVPRLMIQSIELTNFKSYAGKKTIGPFHQRFSAVVGPNGSGKS
NLIDALLFVFGYRTKKLRLNKVSELIHNSNHGRGLQSAKVEVFFQQVLDR
EGPGEEYDILPDSKFSVSRVATSDNKSSYYINDKKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase