prot_M-pyrifera_M_contig120140.4154.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120140.4154.1
Unique Nameprot_M-pyrifera_M_contig120140.4154.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length120
Homology
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BLAST of mRNA_M-pyrifera_M_contig120140.4154.1 vs. uniprot
Match: UPI001D79B2AA (hypothetical protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI001D79B2AA)

HSP 1 Score: 63.2 bits (152), Expect = 1.310e-9
Identity = 30/80 (37.50%), Postives = 51/80 (63.75%), Query Frame = 0 
Query:   38 ALLSILFMQSFISMKTMFTGKAAIYLDSGIEIVSPAVGDEKRLQLRASYRQVDSRERFVALYLELHRIAAENGIDLVEFD 117
            A L I F      +  ++  K + YLD  IEI+ P + +EK ++LRA +RQ+++R +F +LY EL+R+ + NG+DL + +
Sbjct:  130 AALFITFTYGHAFVTDVYNYKISNYLDRTIEILRPKISEEKHIELRALFRQIETRNQFQSLYFELNRLGSNNGVDLPDIE 209
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120140.4154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001D79B2AA1.310e-937.50hypothetical protein n=1 Tax=Vibrio parahaemolytic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 50..119
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 31..49
NoneNo IPR availableTMHMMTMhelixcoord: 31..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120140contigM-pyrifera_M_contig120140:79..438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120140.4154.1mRNA_M-pyrifera_M_contig120140.4154.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120140 79..438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120140.4154.1 ID=prot_M-pyrifera_M_contig120140.4154.1|Name=mRNA_M-pyrifera_M_contig120140.4154.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
LFSSLYRRLRGRGSSTSEMPRPVDAMPSRKVIAVTALALLSILFMQSFIS
MKTMFTGKAAIYLDSGIEIVSPAVGDEKRLQLRASYRQVDSRERFVALYL
ELHRIAAENGIDLVEFDYY*
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