prot_M-pyrifera_M_contig119977.4120.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119977.4120.1
Unique Nameprot_M-pyrifera_M_contig119977.4120.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length174
Homology
BLAST of mRNA_M-pyrifera_M_contig119977.4120.1 vs. uniprot
Match: A0A3M8G140_9BACT (Transcription termination factor Rho n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G140_9BACT)

HSP 1 Score: 301 bits (772), Expect = 1.530e-99
Identity = 155/174 (89.08%), Postives = 164/174 (94.25%), Query Frame = 0
Query:    1 WIGVGGNPGGTGMRVVDLVAPIGKGQRALIVAPPRTGKTVLLKQIANALSTHHKDIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHVRICEMTLGYAKRKAEMGEDAVLLIDSMTRLGRAYNAMQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 174
            WI +G  P  T MRV+DLVAPIGKGQRALIVAPPRTGKTVLLKQIAN+LS +H DIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSH+RI EM LGYAKRKAEMG+DA+LLIDS+TRLGRAYNA+QTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL
Sbjct:  137 WIRLGELPDDTEMRVIDLVAPIGKGQRALIVAPPRTGKTVLLKQIANSLSANHPDIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHIRITEMALGYAKRKAEMGQDAILLIDSLTRLGRAYNAIQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 310          
BLAST of mRNA_M-pyrifera_M_contig119977.4120.1 vs. uniprot
Match: A0A3D1GC52_9BACT (Transcription termination factor Rho n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GC52_9BACT)

HSP 1 Score: 301 bits (772), Expect = 1.630e-99
Identity = 155/174 (89.08%), Postives = 165/174 (94.83%), Query Frame = 0
Query:    1 WIGVGGNPGGTGMRVVDLVAPIGKGQRALIVAPPRTGKTVLLKQIANALSTHHKDIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHVRICEMTLGYAKRKAEMGEDAVLLIDSMTRLGRAYNAMQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 174
            W+ +G NP    MRV+DLVAPIGKGQRALIVAPPRTGKTVLLKQIAN++S +H DIHLSVLLVDERPEEVTDF+RSTDAEVFASSNDKKTQSHVRI EMTLGYAKRKAEMGEDAVLLIDS+TRLGRAYNA+Q+NSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL
Sbjct:  139 WMRMGDNPEDIEMRVIDLVAPIGKGQRALIVAPPRTGKTVLLKQIANSISQNHPDIHLSVLLVDERPEEVTDFMRSTDAEVFASSNDKKTQSHVRITEMTLGYAKRKAEMGEDAVLLIDSLTRLGRAYNAIQSNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 312          
BLAST of mRNA_M-pyrifera_M_contig119977.4120.1 vs. uniprot
Match: A0A2E6N2V2_9BACT (Transcription termination factor Rho n=2 Tax=Balneola sp. TaxID=2024824 RepID=A0A2E6N2V2_9BACT)

HSP 1 Score: 290 bits (742), Expect = 5.990e-95
Identity = 146/174 (83.91%), Postives = 163/174 (93.68%), Query Frame = 0
Query:    1 WIGVGGNPGGTGMRVVDLVAPIGKGQRALIVAPPRTGKTVLLKQIANALSTHHKDIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHVRICEMTLGYAKRKAEMGEDAVLLIDSMTRLGRAYNAMQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 174
            WI +G     T MRV+DLVAPIGKGQRALIVAPPRTGKTVLLKQIA++++ HH DIHLS+LLVDERPEEVTDFIRS++AE+FASSND+KTQSH+RI EMTLGYAKRKAEMG+DAV+LIDS+TRLGRAYNA+Q+NSGRTLSGGLDIRALEIPKKIFGSARKIE GGSLTIIATCL
Sbjct:  141 WIRLGDRAQDTEMRVIDLVAPIGKGQRALIVAPPRTGKTVLLKQIADSIAHHHPDIHLSILLVDERPEEVTDFIRSSNAEIFASSNDRKTQSHIRITEMTLGYAKRKAEMGQDAVILIDSLTRLGRAYNAIQSNSGRTLSGGLDIRALEIPKKIFGSARKIESGGSLTIIATCL 314          
BLAST of mRNA_M-pyrifera_M_contig119977.4120.1 vs. uniprot
Match: A0A356WZ78_9BACT (Transcription termination factor Rho (Fragment) n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A356WZ78_9BACT)

HSP 1 Score: 281 bits (719), Expect = 1.150e-93
Identity = 143/174 (82.18%), Postives = 159/174 (91.38%), Query Frame = 0
Query:    1 WIGVGGNPGGTGMRVVDLVAPIGKGQRALIVAPPRTGKTVLLKQIANALSTHHKDIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHVRICEMTLGYAKRKAEMGEDAVLLIDSMTRLGRAYNAMQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 174
            WI +G  P    MRV+DLV+PIGKGQRALIVAPPRTGKTVLLK+IA +L+ ++ DIH+SVLLVDERPEEVTDFIR+T+AEVFASSNDK T SH+RI EM LGYAKRKAEMGED+VLLIDS+TRLGRAYNA+Q+NSGRTLSGGLDIRALEIPKKIFGSARK EGGGSLTIIATCL
Sbjct:   55 WIKLGHQPDDVEMRVIDLVSPIGKGQRALIVAPPRTGKTVLLKKIAKSLNDNYDDIHVSVLLVDERPEEVTDFIRTTNAEVFASSNDKNTDSHIRITEMALGYAKRKAEMGEDSVLLIDSLTRLGRAYNAIQSNSGRTLSGGLDIRALEIPKKIFGSARKFEGGGSLTIIATCL 228          
BLAST of mRNA_M-pyrifera_M_contig119977.4120.1 vs. uniprot
Match: A0A350PGK9_9BACT (Transcription termination factor Rho n=8 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A350PGK9_9BACT)

HSP 1 Score: 286 bits (731), Expect = 2.300e-93
Identity = 148/174 (85.06%), Postives = 159/174 (91.38%), Query Frame = 0
Query:    1 WIGVGGNPGGTGMRVVDLVAPIGKGQRALIVAPPRTGKTVLLKQIANALSTHHKDIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHVRICEMTLGYAKRKAEMGEDAVLLIDSMTRLGRAYNAMQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 174
            WI +G       MRV+DLVAPIGKGQRALIVAPPRTGKTV+LKQIA +++ +H DI LSVLLVDERPEEVTDFIRSTDAEVFASSND KTQSH+RI EM LGYAKRKAEMGED+VLLIDS+TRLGRAYNA+QTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL
Sbjct:  135 WIKLGEPSENIEMRVIDLVAPIGKGQRALIVAPPRTGKTVMLKQIAKSITENHPDIPLSVLLVDERPEEVTDFIRSTDAEVFASSNDNKTQSHIRITEMALGYAKRKAEMGEDSVLLIDSLTRLGRAYNAIQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 308          
BLAST of mRNA_M-pyrifera_M_contig119977.4120.1 vs. uniprot
Match: A0A2D8CI85_9BACT (Transcription termination factor Rho n=8 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CI85_9BACT)

HSP 1 Score: 282 bits (722), Expect = 5.130e-92
Identity = 148/175 (84.57%), Postives = 160/175 (91.43%), Query Frame = 0
Query:    1 WIGVGGNPGGTGMRVVDLVAPIGKGQRALIVAPPRTGKTVLLKQIANALSTHHKD-IHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHVRICEMTLGYAKRKAEMGEDAVLLIDSMTRLGRAYNAMQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 174
            WI +G N     MRVVDLVAPIGKGQR+LIVAPPRTGKTVLLK+IA +L+ +H D IH+SVLLVDERPEEVTDFIRST AEVFASSNDK TQSH+RI EM LGYAKRKAEMGED+VLLIDS+TRLGRAYNA+Q+NSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL
Sbjct:  133 WIKLGFNADDVEMRVVDLVAPIGKGQRSLIVAPPRTGKTVLLKKIAKSLNDNHSDDIHVSVLLVDERPEEVTDFIRSTQAEVFASSNDKNTQSHIRITEMALGYAKRKAEMGEDSVLLIDSITRLGRAYNAVQSNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 307          
BLAST of mRNA_M-pyrifera_M_contig119977.4120.1 vs. uniprot
Match: A0A316TPG3_9BACT (Transcription termination factor Rho n=1 Tax=Rhodohalobacter mucosus TaxID=2079485 RepID=A0A316TPG3_9BACT)

HSP 1 Score: 276 bits (705), Expect = 2.210e-89
Identity = 142/174 (81.61%), Postives = 156/174 (89.66%), Query Frame = 0
Query:    1 WIGVGGNPGGTGMRVVDLVAPIGKGQRALIVAPPRTGKTVLLKQIANALSTHHKDIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHVRICEMTLGYAKRKAEMGEDAVLLIDSMTRLGRAYNAMQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 174
            +I +G NP    +RV+DLVAPIGKGQRALIVAPPRTGKTVLLK+IA +L+ +H +IH  +LLVDERPEEVTDF+RST+AEVFASSNDK T+SHVRI EM LGY KRKAE GE AVLLIDS+TRLGRAYNA QTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL
Sbjct:  139 YIQLGHNPDDIELRVIDLVAPIGKGQRALIVAPPRTGKTVLLKKIAKSLTDNHPNIHTGILLVDERPEEVTDFLRSTNAEVFASSNDKPTESHVRISEMALGYVKRKAEFGEHAVLLIDSLTRLGRAYNAAQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 312          
BLAST of mRNA_M-pyrifera_M_contig119977.4120.1 vs. uniprot
Match: A0A6M1SSL6_9BACT (Transcription termination factor Rho n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1SSL6_9BACT)

HSP 1 Score: 273 bits (698), Expect = 1.820e-88
Identity = 138/162 (85.19%), Postives = 150/162 (92.59%), Query Frame = 0
Query:   13 MRVVDLVAPIGKGQRALIVAPPRTGKTVLLKQIANALSTHHKDIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHVRICEMTLGYAKRKAEMGEDAVLLIDSMTRLGRAYNAMQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 174
            MRV+DLVAPIGKGQRALIVAPPRTGKTVLLK++A ++  H+ DIH SVLLVDERPEEVTDF+R+T AEVFASSNDK T SH+R+ EM LGY KRKAEMGEDAVLLIDS+TRLGRAYNA Q+NSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL
Sbjct:  140 MRVIDLVAPIGKGQRALIVAPPRTGKTVLLKKMAESVCEHYPDIHTSVLLVDERPEEVTDFLRTTKAEVFASSNDKPTTSHLRVTEMALGYVKRKAEMGEDAVLLIDSLTRLGRAYNAAQSNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 301          
BLAST of mRNA_M-pyrifera_M_contig119977.4120.1 vs. uniprot
Match: A0A352SK74_9BACT (Transcription termination factor Rho n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A352SK74_9BACT)

HSP 1 Score: 272 bits (696), Expect = 4.910e-88
Identity = 136/168 (80.95%), Postives = 150/168 (89.29%), Query Frame = 0
Query:    7 NPGGTGMRVVDLVAPIGKGQRALIVAPPRTGKTVLLKQIANALSTHHKDIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHVRICEMTLGYAKRKAEMGEDAVLLIDSMTRLGRAYNAMQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 174
            NP    +R +DL+APIGKGQRALIVAPPRTGKTVLLKQIA AL+ HH ++H S+LLVDERPEEVTDF+R+T AEVFASSND+ TQSHVRI EM LGYAKRKAE G+DAVLLIDS+TRLGRAYNA QT SGRTLSGGLDIRALE+PK+IFGSAR  EGGGSLTIIATCL
Sbjct:  147 NPEEVELRALDLIAPIGKGQRALIVAPPRTGKTVLLKQIAGALTEHHPEVHTSILLVDERPEEVTDFLRTTSAEVFASSNDRSTQSHVRIAEMALGYAKRKAESGQDAVLLIDSLTRLGRAYNAAQTGSGRTLSGGLDIRALEVPKRIFGSARAFEGGGSLTIIATCL 314          
BLAST of mRNA_M-pyrifera_M_contig119977.4120.1 vs. uniprot
Match: A0A2N0VGY7_9BACT (Transcription termination factor Rho n=2 Tax=Rhodohalobacter TaxID=1974209 RepID=A0A2N0VGY7_9BACT)

HSP 1 Score: 269 bits (688), Expect = 6.650e-87
Identity = 135/162 (83.33%), Postives = 151/162 (93.21%), Query Frame = 0
Query:   13 MRVVDLVAPIGKGQRALIVAPPRTGKTVLLKQIANALSTHHKDIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHVRICEMTLGYAKRKAEMGEDAVLLIDSMTRLGRAYNAMQTNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 174
            +RV+DLV+PIG+GQRALIVAPPRTGKTVLLK+IA AL+ HH DI+  +LLVDERPEEVTDF+RST+A+VFASSNDK T+SHVRI EM LG+ KRKAE GE AVLLIDS+TRLGRAYNA+Q+NSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL
Sbjct:  144 LRVIDLVSPIGRGQRALIVAPPRTGKTVLLKKIARALTEHHPDIYTGILLVDERPEEVTDFLRSTNADVFASSNDKPTESHVRISEMALGHVKRKAEAGEHAVLLIDSLTRLGRAYNAVQSNSGRTLSGGLDIRALEIPKKIFGSARKIEGGGSLTIIATCL 305          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119977.4120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M8G140_9BACT1.530e-9989.08Transcription termination factor Rho n=1 Tax=Balne... [more]
A0A3D1GC52_9BACT1.630e-9989.08Transcription termination factor Rho n=1 Tax=Balne... [more]
A0A2E6N2V2_9BACT5.990e-9583.91Transcription termination factor Rho n=2 Tax=Balne... [more]
A0A356WZ78_9BACT1.150e-9382.18Transcription termination factor Rho (Fragment) n=... [more]
A0A350PGK9_9BACT2.300e-9385.06Transcription termination factor Rho n=8 Tax=Bacte... [more]
A0A2D8CI85_9BACT5.130e-9284.57Transcription termination factor Rho n=8 Tax=Balne... [more]
A0A316TPG3_9BACT2.210e-8981.61Transcription termination factor Rho n=1 Tax=Rhodo... [more]
A0A6M1SSL6_9BACT1.820e-8885.19Transcription termination factor Rho n=1 Tax=Balne... [more]
A0A352SK74_9BACT4.910e-8880.95Transcription termination factor Rho n=3 Tax=Bacte... [more]
A0A2N0VGY7_9BACT6.650e-8783.33Transcription termination factor Rho n=2 Tax=Rhodo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainPFAMPF00006ATP-synt_abcoord: 12..139
e-value: 6.1E-13
score: 48.9
NoneNo IPR availableGENE3D3.40.50.300coord: 5..174
e-value: 4.7E-64
score: 218.2
NoneNo IPR availablePANTHERPTHR46425:SF1TRANSCRIPTION TERMINATION FACTOR RHOcoord: 12..174
IPR004665Transcription termination factor RhoPANTHERPTHR46425FAMILY NOT NAMEDcoord: 12..174
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 9..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119977contigM-pyrifera_M_contig119977:1..522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119977.4120.1mRNA_M-pyrifera_M_contig119977.4120.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119977 1..522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119977.4120.1 ID=prot_M-pyrifera_M_contig119977.4120.1|Name=mRNA_M-pyrifera_M_contig119977.4120.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
WIGVGGNPGGTGMRVVDLVAPIGKGQRALIVAPPRTGKTVLLKQIANALS
THHKDIHLSVLLVDERPEEVTDFIRSTDAEVFASSNDKKTQSHVRICEMT
LGYAKRKAEMGEDAVLLIDSMTRLGRAYNAMQTNSGRTLSGGLDIRALEI
PKKIFGSARKIEGGGSLTIIATCL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000194ATPase_F1/V1/A1_a/bsu_nucl-bd
IPR004665Term_rho
IPR027417P-loop_NTPase