prot_M-pyrifera_M_contig1197.4060.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1197.4060.1
Unique Nameprot_M-pyrifera_M_contig1197.4060.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length1117
Homology
BLAST of mRNA_M-pyrifera_M_contig1197.4060.1 vs. uniprot
Match: D8LQ94_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ94_ECTSI)

HSP 1 Score: 694 bits (1790), Expect = 2.540e-228
Identity = 549/1207 (45.48%), Postives = 650/1207 (53.85%), Query Frame = 0
Query:    3 LEMDGEWFGDAQEAASSAVQKVSIVACRQQREPDSPAMTLLRSITKASADAVPGL-SASPLPWDG---HRSRLRPREQYSRP-----GAAGGGSGXXXXXVGSRGGPTSPGDFYRLPWYRRPLPSPRPSGAAASLDLRRRHSMLSAPRSGLRPPSTSVEGSFVSGGAGASRGRNSARDPPRPAPGQQASASEGFVSPMPRVRGAAKMPEPPRNMAPTVPPTQQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAVGMLEVVVADGDTARASSMASGDRDVVAEGEPPASAGVGAGVAVRELSGGDDAGEIKRLKAELDRLKREMAAMAAAXXXXTTPQPGATPGSDFG---SPRIEVTTPVPS-------EGRSAWQWADGKPPG--VTDRPKSTRNLGRAVRADDSWMQRRRXXXXXXXXXXXX--------------SLTSGFVGGVMAGSVLPTPTSXXXXXXXXXXXXXXXXXXXXXSAVEALSPPRHSLGSVGEGPSPASGEKAEGAAAAAAERR---------AGRGGLSAGGDRXXXXXXXXXXXXXXXSLRP-------------------FPVFFPVQA-------SRGTRAAEALAPPPPTRVPRDGSSAXXXXXXXXXXXXXXXXXXXXXXXXEDEDAIAKKVAVSASPPAAPGGRRRERPSVGRARVWRWVLAQRTENQTVRQALLTHGLPPLDRRHIWAAWAAVAKPEGATGRRMGAPSDPAAQGSVASIIVHDVQRTKIVHPLFATGGPGMAMLKRVLLRCAELGAVKEAGYIQGMNYLAGFLLITLADCIAADRSPXXXXXXXXXXXXX-RDPASANAPSTPRGGVGGGLLQP---------ELPLAISREGATGGEGGREADA--QPTAADVELIEREAVEVMLGIIALQGGVLSRDLWGLHANTELVETLLSKHCPDIMDHLRTVSLELIVLTPRWFICIYAGSMASQPVVSRIWDLFTWYGRRGPAVLVWVALGILHGCRARILESRGLPATVKAVRRHAEGCRSFDELIRQAPIGLNQVVAAWEDQGENRRIAAMDGDGAVPDKMVAGLVQEMTGEQMLPPPMEDTSPQAHRRSASGYAPSTSTPAGYGIQFPSTPGRPPTPLSSPRSPFPDWAASIFRSSTGG----GGGL----DAEGFSAERGDG---ERPPASPRFDGTPARTRQLRRAASTSWW 1116
            LE DGEWFGDA+  A SA +KV + A  Q +E DSPAM+LL SITKASA+AVP L S S L  D     +SRLR R   SRP     G+AG G G      G    P  PGD+YRLPWYRRPLPS R  G                                V+GG  A+  + +  D  R     Q +AS+   SP+      A++     +  PT                                             A    E    +G  A  S   SG   V A  E P            E     ++ E+++L+AE+ RLKREMA+MAA XXXX                 S RIE ++PV S       E   AWQW      G   +D   ++R +   +RAD+SWMQ   XXXXXXXXXXXX              S+  GF G    GSVLP P                         V  LSPP +S     EGPSPAS EK + A      RR         A   G  AG   XXXXXXX  XXXXXX                         VFFPV A       + GT  AE  A        R G S                         + + A      V A  P      RR     G  RVWRWVLAQRTE+QTVRQA+++HGLP   RRHIWAAWAAVA PE  T ++    SDPA +GS+ + I HDV RTKIVHPLF +GG G+AMLKRVL+RCAELGAVKEAGYIQGMNYLAGF+LIT ADC+ ++R                    S+NAP+       G + +P         E   A+  EG  GG   +EA A  +PT A+V  IE E V+++ G+IALQGGVLSRDLWGLHANTELVE LLS+ CPD+M+HLR V+LELIVLTPRWFICIYAGSM++Q VV+RIWDLF WYGRRGPAVLVWVAL +LHGCR  + ES GLPATVKAVRR+AEGC++FDEL+RQAP+GLN+VVAAWE+QG NR+IA +DG+GA+PD+M AGLV+EMTGE +  PP E  SP  HRRS SG AP  +T   +GIQFPSTPGRPPTPL+SPRSPFP+WAA+IFRSSTGG    GGG+    D    +  RG G     PP SPRF  TP+R RQLRRAASTSWW
Sbjct:   82 LEKDGEWFGDARGVADSASEKV-LAAAVQDQEQDSPAMSLLCSITKASANAVPELCSPSSLTGDAAGPRQSRLRQRGGPSRPRFSSVGSAGSGGGAVGGGRGVVAPP--PGDYYRLPWYRRPLPSNRRVG--------------------------------VAGGGEATHLKRAVAD--RAGAVAQQAASKA-TSPVVSGNAQAEV-----HATPTA-----------------------------------------NSMAADRDESTREEGGFADRSR--SGGTAVAAGTEQPRGTSP-------EKEHAAESEELEKLRAEVARLKREMASMAAXXXXXXXXXXXXXXXXXXXRRPSQRIETSSPVASFSSSHAQEKHPAWQWDATAAEGGESSDADGASRPMPNRLRADNSWMQXXXXXXXXXXXXXXXXXXXXRTERRYHRDSIGVGFSGTSRPGSVLPAPRKDSSNGGERSRGSSEDIG----DEVGLLSPPVNSAKI--EGPSPASREKEKTAVVLEGRRRDSGADSINGASVAGAGAGXXXXXXXXXXRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXQMSVFFPVIAPPDPNADAGGTETAEGAAALASAAATRIGESVTPPGALRAARAARDAVSAKKQLQQQQQLAARHAPVVYAKIPVETV--RRRGGVDGNGRVWRWVLAQRTEDQTVRQAVMSHGLPRFGRRHIWAAWAAVATPE--TYKKPKQSSDPAKEGSIVNTIAHDVARTKIVHPLFGSGGQGLAMLKRVLVRCAELGAVKEAGYIQGMNYLAGFMLITFADCVLSEREDLKSRSSRNRGTSGGSSTCSSNAPAD--SAAAGDVTEPSDVQPGPANEGSAAVETEGMGGG-AEKEAAAVKEPTVAEVAQIENECVQMLQGVIALQGGVLSRDLWGLHANTELVEDLLSRQCPDVMEHLRKVNLELIVLTPRWFICIYAGSMSNQSVVTRIWDLFMWYGRRGPAVLVWVALAVLHGCRKGMFESHGLPATVKAVRRYAEGCKTFDELVRQAPVGLNEVVAAWEEQGNNRKIALLDGEGALPDRMAAGLVEEMTGEPVYLPPPEVLSPPRHRRSPSGLAPVAATSTAFGIQFPSTPGRPPTPLTSPRSPFPEWAANIFRSSTGGPNEDGGGVPASVDVGSVNGGRGGGGGDNLPPTSPRFS-TPSRQRQLRRAASTSWW 1181          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1197.4060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ94_ECTSI2.540e-22845.48Rab-GAP TBC domain-containing protein n=2 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 312..332
NoneNo IPR availableGENE3D1.10.472.80coord: 838..961
e-value: 7.5E-15
score: 56.8
NoneNo IPR availableGENE3D1.10.8.270coord: 648..748
e-value: 5.4E-9
score: 38.1
NoneNo IPR availablePANTHERPTHR22957:SF526coord: 841..960
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 634..742
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 841..960
NoneNo IPR availablePANTHERPTHR22957:SF526coord: 634..742
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 608..934
e-value: 3.4E-5
score: 25.7
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 681..742
e-value: 5.0E-6
score: 26.3
coord: 839..931
e-value: 6.5E-10
score: 39.0
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 642..908
score: 13.162
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 842..959
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 630..867

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1197contigM-pyrifera_M_contig1197:4254..26401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1197.4060.1mRNA_M-pyrifera_M_contig1197.4060.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1197 4254..26401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1197.4060.1 ID=prot_M-pyrifera_M_contig1197.4060.1|Name=mRNA_M-pyrifera_M_contig1197.4060.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=1117bp
MALEMDGEWFGDAQEAASSAVQKVSIVACRQQREPDSPAMTLLRSITKAS
ADAVPGLSASPLPWDGHRSRLRPREQYSRPGAAGGGSGGGRGGVGSRGGP
TSPGDFYRLPWYRRPLPSPRPSGAAASLDLRRRHSMLSAPRSGLRPPSTS
VEGSFVSGGAGASRGRNSARDPPRPAPGQQASASEGFVSPMPRVRGAAKM
PEPPRNMAPTVPPTQQFAAAAAAATAAADATAADAAAAPEMVAAAQVVEE
EEREEAVGMLEVVVADGDTARASSMASGDRDVVAEGEPPASAGVGAGVAV
RELSGGDDAGEIKRLKAELDRLKREMAAMAAATAAATTPQPGATPGSDFG
SPRIEVTTPVPSEGRSAWQWADGKPPGVTDRPKSTRNLGRAVRADDSWMQ
RRRSGRYHHRRSSSESLTSGFVGGVMAGSVLPTPTSDGGSSGGQLTFSSR
GGQHHHHSAVEALSPPRHSLGSVGEGPSPASGEKAEGAAAAAAERRAGRG
GLSAGGDRGSQSGSQSGSANGSASLRPFPVFFPVQASRGTRAAEALAPPP
PTRVPRDGSSAAVAVAAVVAVAEAAEAVEAAATTAEDEDAIAKKVAVSAS
PPAAPGGRRRERPSVGRARVWRWVLAQRTENQTVRQALLTHGLPPLDRRH
IWAAWAAVAKPEGATGRRMGAPSDPAAQGSVASIIVHDVQRTKIVHPLFA
TGGPGMAMLKRVLLRCAELGAVKEAGYIQGMNYLAGFLLITLADCIAADR
SPPPDPPGGGTGGRRRDPASANAPSTPRGGVGGGLLQPELPLAISREGAT
GGEGGREADAQPTAADVELIEREAVEVMLGIIALQGGVLSRDLWGLHANT
ELVETLLSKHCPDIMDHLRTVSLELIVLTPRWFICIYAGSMASQPVVSRI
WDLFTWYGRRGPAVLVWVALGILHGCRARILESRGLPATVKAVRRHAEGC
RSFDELIRQAPIGLNQVVAAWEDQGENRRIAAMDGDGAVPDKMVAGLVQE
MTGEQMLPPPMEDTSPQAHRRSASGYAPSTSTPAGYGIQFPSTPGRPPTP
LSSPRSPFPDWAASIFRSSTGGGGGLDAEGFSAERGDGERPPASPRFDGT
PARTRQLRRAASTSWW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf