prot_M-pyrifera_M_contig11929.3970.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11929.3970.1
Unique Nameprot_M-pyrifera_M_contig11929.3970.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length177
Homology
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BLAST of mRNA_M-pyrifera_M_contig11929.3970.1 vs. uniprot
Match: D7FKS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKS0_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 8.440e-49
Identity = 87/132 (65.91%), Postives = 107/132 (81.06%), Query Frame = 0 
Query:   47 ASISQYDVEHGRSACTCICLEASVSILGHMATGS-WTGSPENVANIISIGVVMYEAVVAAGTLSTEHTSVSEILAAVTRYSDLLEPATARVYHQGVLGSDMSIAAVLGGIRRERQESSRATAVIITKPPETV 177
            ASISQYDV++GRS+CTCICLEAS+++L  +  G+ W GSP++VAN ++ GV MYEAV A GTL+ EHTSV+EILA V RY D L+PAT +V HQG+LGSD SIA VLG IR ER++ SR  AV+ITKPPETV
Sbjct:   18 ASISQYDVQNGRSSCTCICLEASLTVLERLGDGTAWAGSPDDVANCVNTGVAMYEAVAATGTLAVEHTSVAEILATVARYHDALQPATDKVTHQGLLGSDTSIARVLGEIRGERRDQSRPVAVVITKPPETV 149
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BLAST of mRNA_M-pyrifera_M_contig11929.3970.1 vs. uniprot
Match: B8BTI6_THAPS (UBA domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTI6_THAPS)

HSP 1 Score: 58.5 bits (140), Expect = 4.860e-7
Identity = 62/200 (31.00%), Postives = 88/200 (44.00%), Query Frame = 0 
Query:    4 LLAMGFPEETARAALEAHGNDLTRSLDSLL------LSAEPAS--------THSSSPA---SISQYDVEHGRSACTCICLEASVSILGHMATGSWTGSPENVANIISIGVVMYEAVVAAGTL----STEHTSVSEILAAVTRYSDLLEPATARVYHQGVLGSD-----MSIAAVLGGIRRERQESSRATAVIITKPPETV 177
            L +MGF  E A  AL+  G ++ R+LDSLL      LS    +        TH    A    ISQY+   GRSACT I L  ++ +L  +        P+   +   +   + E +     L      EH SV E+L A  +    L         QG+L S      M + AVL   + E   S+  +A+++TKPPETV
Sbjct:    2 LFSMGFNHEQALQALDDSGGNVERALDSLLGGGDEGLSGAGGAPLPFAGIITHGDVRAVHSEISQYNDPMGRSACTSIALTMALKVLSQLHACDSAVPPDEFVDASFLSTSIQEGIQLFSKLRNNSGVEHLSVEEVLGAHNKSFASLS-MLGNSPRQGILDSTNDLSPMGLEAVLSQCQAEATNSNSFSAIVLTKPPETV 200
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11929.3970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKS0_ECTSI8.440e-4965.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
B8BTI6_THAPS4.860e-731.00UBA domain-containing protein n=1 Tax=Thalassiosir... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 2..28
e-value: 3.9E-6
score: 26.6
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 1..35
score: 11.535
NoneNo IPR availableGENE3D1.10.8.10coord: 1..35
e-value: 3.2E-8
score: 35.4
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11929contigM-pyrifera_M_contig11929:196..1950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11929.3970.1mRNA_M-pyrifera_M_contig11929.3970.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11929 196..1953 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11929.3970.1 ID=prot_M-pyrifera_M_contig11929.3970.1|Name=mRNA_M-pyrifera_M_contig11929.3970.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp
MDQLLAMGFPEETARAALEAHGNDLTRSLDSLLLSAEPASTHSSSPASIS
QYDVEHGRSACTCICLEASVSILGHMATGSWTGSPENVANIISIGVVMYE
AVVAAGTLSTEHTSVSEILAAVTRYSDLLEPATARVYHQGVLGSDMSIAA
VLGGIRRERQESSRATAVIITKPPETV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR009060UBA-like_sf