prot_M-pyrifera_M_contig119264.3963.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119264.3963.1
Unique Nameprot_M-pyrifera_M_contig119264.3963.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length169
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig119264.3963.1 vs. uniprot
Match: Q54GR0_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54GR0_DICDI)

HSP 1 Score: 252 bits (643), Expect = 3.880e-75
Identity = 116/171 (67.84%), Postives = 145/171 (84.80%), Query Frame = 0 
Query:    1 MCKDQHGCRFLQKKLEEKNARVVAIVFDEVYDYIVELMTDPFGNYLCQKLIEHCNEKQQLLIVQKVASSLVAISKNMHGTRAVQKMIECLCTPAQLQLVVNALQAHVVELIQDLNGNHVIQRCLNRLSTTDKQFVYDAVAAN--CVAVATHRHGCCVMQRCIDFASEEQKV 169
            +C+DQHGCRFLQKKLEE + ++  I+F EV DY++ELMTDPFGNYLCQKL+EHCN++Q+L I++KV + +V IS NMHGTRAVQKMIE L TP Q+QL+  +L+  VV LIQDLNGNHVIQ+CLN+LS  D QF+YDAV+++  C+AVATHRHGCCV+QRCID ASE QK+
Sbjct:  719 LCRDQHGCRFLQKKLEESDLQLTEIIFKEVCDYMLELMTDPFGNYLCQKLLEHCNDRQRLTIIEKVGTDIVRISMNMHGTRAVQKMIEYLTTPEQIQLIKRSLKDSVVPLIQDLNGNHVIQKCLNKLSPQDNQFIYDAVSSDGSCIAVATHRHGCCVLQRCIDHASESQKL 889
[Close]
BLAST of mRNA_M-pyrifera_M_contig119264.3963.1 vs. uniprot
Match: R4X6B7_TAPDE (Putative RNA-binding protein n=1 Tax=Taphrina deformans (strain PYCC 5710 / ATCC 11124 / CBS 356.35 / IMI 108563 / JCM 9778 / NBRC 8474) TaxID=1097556 RepID=R4X6B7_TAPDE)

HSP 1 Score: 240 bits (613), Expect = 5.390e-75
Identity = 109/169 (64.50%), Postives = 138/169 (81.66%), Query Frame = 0 
Query:    1 MCKDQHGCRFLQKKLEEKNARVVAIVFDEVYDYIVELMTDPFGNYLCQKLIEHCNEKQQLLIVQKVASSLVAISKNMHGTRAVQKMIECLCTPAQLQLVVNALQAHVVELIQDLNGNHVIQRCLNRLSTTDKQFVYDAVAANCVAVATHRHGCCVMQRCIDFASEEQKV 169
            +CKDQHGCRFLQKKL+E+N   + ++F+E Y +  ELM DPFGNYLCQKL+EHC++ ++L IV+ VA+ LV IS NMHGTRAVQK+IE L TP Q+Q+   AL  + V LI+DLNGNHVIQ+CLNRL +++ QF++DAV+ +CV VATHRHGCCV+QRCID ASE QKV
Sbjct:  108 LCKDQHGCRFLQKKLDERNPTSIDLIFEETYSHAAELMIDPFGNYLCQKLLEHCDDHRRLKIVKTVANDLVNISLNMHGTRAVQKLIEFLTTPEQIQIATAALNVNAVTLIKDLNGNHVIQKCLNRLGSSENQFIFDAVSRHCVEVATHRHGCCVLQRCIDHASENQKV 276
[Close]
BLAST of mRNA_M-pyrifera_M_contig119264.3963.1 vs. uniprot
Match: A0A152A339_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A339_9MYCE)

HSP 1 Score: 249 bits (637), Expect = 7.390e-75
Identity = 114/171 (66.67%), Postives = 144/171 (84.21%), Query Frame = 0 
Query:    1 MCKDQHGCRFLQKKLEEKNARVVAIVFDEVYDYIVELMTDPFGNYLCQKLIEHCNEKQQLLIVQKVASSLVAISKNMHGTRAVQKMIECLCTPAQLQLVVNALQAHVVELIQDLNGNHVIQRCLNRLSTTDKQFVYDAVAA--NCVAVATHRHGCCVMQRCIDFASEEQKV 169
            +C+DQHGCRFLQKKLE+   ++  ++F EV DY++ELMTDPFGNYLCQKL+EHCN++Q+L I+++V + +V IS NMHGTRAVQKMIE L TP Q+ L+  +L+ +VV LIQDLNGNHVIQ+CLN+LS  D QF+YD+V+A  NCVAVATHRHGCCV+QRCID ASE QK+
Sbjct:  597 LCRDQHGCRFLQKKLEDNETQLTEVIFKEVCDYMLELMTDPFGNYLCQKLLEHCNDQQRLAIIERVGADIVRISMNMHGTRAVQKMIEYLTTPEQINLIKLSLKDYVVPLIQDLNGNHVIQKCLNKLSPADNQFIYDSVSAEGNCVAVATHRHGCCVLQRCIDHASESQKL 767
[Close]
BLAST of mRNA_M-pyrifera_M_contig119264.3963.1 vs. uniprot
Match: A0A7S4IEM7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IEM7_9EUKA)

HSP 1 Score: 244 bits (624), Expect = 2.050e-74
Identity = 120/149 (80.54%), Postives = 135/149 (90.60%), Query Frame = 0 
Query:    2 CKDQHGCRFLQKKLEEK--NARVVAIVFDEVYDYIVELMTDPFGNYLCQKLIEHCNEKQQLLIVQKVASSLVAISKNMHGTRAVQKMIECLCTPAQLQLVVNALQAHVVELIQDLNGNHVIQRCLNRLSTTDKQFVYDAVAANCVAVAT 148
            CKDQHGCRFLQKKLEEK  N + V I+F+EVYDY+VELMTDPFGNYLCQKLIEHC+++QQLLIVQKVA  LV+ISKNMHGTRAVQKMIECLCTP Q+QLVVN+L++ VV LI+DLNGNHVIQRCL+ LS  +KQFVYDAVAANCV VAT
Sbjct:  378 CKDQHGCRFLQKKLEEKDQNPKAVDIIFNEVYDYMVELMTDPFGNYLCQKLIEHCSQQQQLLIVQKVAPHLVSISKNMHGTRAVQKMIECLCTPPQVQLVVNSLRSSVVPLIKDLNGNHVIQRCLHELSYQNKQFVYDAVAANCVEVAT 526
[Close]
BLAST of mRNA_M-pyrifera_M_contig119264.3963.1 vs. uniprot
Match: F4QAV7_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QAV7_CAVFA)

HSP 1 Score: 249 bits (636), Expect = 1.480e-73
Identity = 115/171 (67.25%), Postives = 142/171 (83.04%), Query Frame = 0 
Query:    1 MCKDQHGCRFLQKKLEEKNARVVAIVFDEVYDYIVELMTDPFGNYLCQKLIEHCNEKQQLLIVQKVASSLVAISKNMHGTRAVQKMIECLCTPAQLQLVVNALQAHVVELIQDLNGNHVIQRCLNRLSTTDKQFVYDAVA--ANCVAVATHRHGCCVMQRCIDFASEEQKV 169
            +C+DQHGCRFLQKKLEE +  +  ++F EV +Y++ELMTDPFGNYLCQKL+EHCN++Q+L+I+ KV   +V IS NMHGTRAVQKMIE L TP Q+ L+  +L  HVV LIQDLNGNHVIQ+CLN+L+  D QF+YD+V+  ANC+AVATHRHGCCV+QRCID ASE QKV
Sbjct: 1038 LCRDQHGCRFLQKKLEEGDEPLTELIFKEVCEYMLELMTDPFGNYLCQKLLEHCNDRQRLVIIDKVGPDIVRISMNMHGTRAVQKMIEFLTTPEQIALIKKSLAQHVVPLIQDLNGNHVIQKCLNKLAPPDNQFIYDSVSSSANCIAVATHRHGCCVLQRCIDHASETQKV 1208
[Close]
BLAST of mRNA_M-pyrifera_M_contig119264.3963.1 vs. uniprot
Match: A0A167NAZ6_PHYB8 (PUM-HD domain-containing protein (Fragment) n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167NAZ6_PHYB8)

HSP 1 Score: 232 bits (591), Expect = 3.050e-73
Identity = 108/168 (64.29%), Postives = 137/168 (81.55%), Query Frame = 0 
Query:    1 MCKDQHGCRFLQKKLEEKNARVVAIVFDEVYDYIVELMTDPFGNYLCQKLIEHCNEKQQLLIVQKVASSLVAISKNMHGTRAVQKMIECLCTPAQLQLVVNALQAHVVELIQDLNGNHVIQRCLNRLSTTDKQFVYDAVAANCVAVATHRHGCCVMQRCIDFASEEQK 168
            +CKDQ+GCRFLQKKLEE N + + ++FDE++ + VELMTDPFGNYLCQKL+E C+  Q+ +IV  +A  L++IS NMHGTRAVQK+IE L TP Q+Q V  AL  +VV LI+DLNGNHVIQ+CL+RLS  + QF+YDAV+A+C+ VATHRHGCCV+QRCID A+  QK
Sbjct:   27 ICKDQNGCRFLQKKLEEPNGQNLEMIFDEIHSHFVELMTDPFGNYLCQKLLERCSNTQRGIIVTIIAPELLSISLNMHGTRAVQKLIEFLVTPEQIQAVTAALAPNVVALIKDLNGNHVIQKCLHRLSAENNQFIYDAVSASCIKVATHRHGCCVLQRCIDHAAPYQK 194
[Close]
BLAST of mRNA_M-pyrifera_M_contig119264.3963.1 vs. uniprot
Match: D3BHB5_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BHB5_POLPP)

HSP 1 Score: 246 bits (628), Expect = 1.790e-72
Identity = 114/170 (67.06%), Postives = 141/170 (82.94%), Query Frame = 0 
Query:    1 MCKDQHGCRFLQKKLEEKNARVVAIVFDEVYDYIVELMTDPFGNYLCQKLIEHCNEKQQLLIVQKVASSLVAISKNMHGTRAVQKMIECLCTPAQLQLVVNALQAHVVELIQDLNGNHVIQRCLNRLSTTDKQFVYDAVA--ANCVAVATHRHGCCVMQRCIDFASEEQK 168
            +C+DQHGCRFLQKKLE+ +  +  I+F EV +Y++ELMTDPFGNYLCQKL+EHCN++Q+L+I+ KV   +V IS NMHGTRAVQKMIE L TP Q+ L+  +L  +VV LIQDLNGNHVIQ+CLN+LS  D QF+YD+V+  ANC+AVATHRHGCCV+QRCID ASE QK
Sbjct: 1032 LCRDQHGCRFLQKKLEDGDEPLTEIIFKEVCEYMLELMTDPFGNYLCQKLLEHCNDRQRLMIIDKVGPDIVRISMNMHGTRAVQKMIEFLTTPEQIALIKKSLANYVVPLIQDLNGNHVIQKCLNKLSPPDNQFIYDSVSSSANCIAVATHRHGCCVLQRCIDHASESQK 1201
[Close]
BLAST of mRNA_M-pyrifera_M_contig119264.3963.1 vs. uniprot
Match: A0A2P6MPB1_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MPB1_9EUKA)

HSP 1 Score: 239 bits (610), Expect = 3.820e-72
Identity = 113/169 (66.86%), Postives = 139/169 (82.25%), Query Frame = 0 
Query:    3 KDQHGCRFLQKKLEEKNARVVAIVFDEVYDYIVELMTDPFGNYLCQKLIEHCNEKQQLLIVQKVASSLVAISKNMHGTRAVQKMIECLCTPAQLQLVVNALQAHVVELIQDLNGNHVIQRCLNRLSTTDKQFVYDAVA--ANCVAVATHRHGCCVMQRCIDFASEEQKV 169
            +DQ GCR+LQKKLEEK A V+  +F+EV D++ ELM DPFGNYLCQKL+E C  KQ+L I++KV+  LV+ISKNMHGTRAVQK+IECL TP Q+ LV  +L++HVV+LIQDLNGNHVIQRCLN L   + QF+Y++V   +NCV VATHRHGCCV+QRCID+AS EQK 
Sbjct:  400 RDQQGCRYLQKKLEEKEAPVIQKIFEEVSDHVGELMIDPFGNYLCQKLLEFCTSKQRLEIIEKVSGELVSISKNMHGTRAVQKLIECLDTPPQVLLVEKSLKSHVVDLIQDLNGNHVIQRCLNLLKPAENQFIYNSVVTGSNCVRVATHRHGCCVLQRCIDYASPEQKT 568
[Close]
BLAST of mRNA_M-pyrifera_M_contig119264.3963.1 vs. uniprot
Match: M9LUT9_PSEA3 (Translational repressor MPT5/PUF4 and related RNA-binding proteins n=1 Tax=Pseudozyma antarctica (strain T-34) TaxID=1151754 RepID=M9LUT9_PSEA3)

HSP 1 Score: 238 bits (607), Expect = 4.530e-72
Identity = 110/169 (65.09%), Postives = 135/169 (79.88%), Query Frame = 0 
Query:    1 MCKDQHGCRFLQKKLEEKNARVVAIVFDEVYDYIVELMTDPFGNYLCQKLIEHCNEKQQLLIVQKVASSLVAISKNMHGTRAVQKMIECLCTPAQLQLVVNALQAHVVELIQDLNGNHVIQRCLNRLSTTDKQFVYDAVAANCVAVATHRHGCCVMQRCIDFASEEQKV 169
            +CKDQHGCRFLQKKLEE N     ++F E + +  ELMTDPFGNYLCQK++E+C ++Q+ LIV+ VA  LV IS NMHGTRAVQKMI+ L TP Q+  ++ AL  +VV LI+DLNGNHV+Q+CLNRL   D QF+Y+AVAA+CV VATHRHGCCV+QRCID ASE Q+V
Sbjct:  237 LCKDQHGCRFLQKKLEESNGAHRDMIFSETFSHFAELMTDPFGNYLCQKMLEYCTDEQRNLIVELVAPELVTISLNMHGTRAVQKMIDFLSTPRQIHSIIVALSMNVVTLIKDLNGNHVVQKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASESQRV 405
[Close]
BLAST of mRNA_M-pyrifera_M_contig119264.3963.1 vs. uniprot
Match: A0A1Y2ET51_PROLT (Armadillo-type protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2ET51_PROLT)

HSP 1 Score: 237 bits (605), Expect = 7.800e-71
Identity = 112/169 (66.27%), Postives = 137/169 (81.07%), Query Frame = 0 
Query:    1 MCKDQHGCRFLQKKLEEKNARVVAIVFDEVYDYIVELMTDPFGNYLCQKLIEHCNEKQQLLIVQKVASSLVAISKNMHGTRAVQKMIECLCTPAQLQLVVNALQAHVVELIQDLNGNHVIQRCLNRLSTTDKQFVYDAVAANCVAVATHRHGCCVMQRCIDFASEEQKV 169
            +CKDQHGCR+LQKKL+E+    V ++F E Y +  ELM DPFGNYLCQKL+EHC+E Q+  IVQ VA +L+ IS NMHGTRAVQKMIE L TP Q++L  +AL A+ V LI+DLNGNHVIQ+CLNRL++ + QF++DAVA NCV VATHRHGCCV+QRCID AS+ QKV
Sbjct:  434 LCKDQHGCRYLQKKLDERIPANVDLIFAETYMHAAELMIDPFGNYLCQKLLEHCDEGQRFKIVQNVAPNLINISLNMHGTRAVQKMIEFLHTPEQIKLATSALNANAVLLIKDLNGNHVIQKCLNRLNSEEAQFIFDAVAKNCVEVATHRHGCCVLQRCIDHASDAQKV 602
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119264.3963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q54GR0_DICDI3.880e-7567.84Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
R4X6B7_TAPDE5.390e-7564.50Putative RNA-binding protein n=1 Tax=Taphrina defo... [more]
A0A152A339_9MYCE7.390e-7566.67Uncharacterized protein n=1 Tax=Tieghemostelium la... [more]
A0A7S4IEM7_9EUKA2.050e-7480.54Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
F4QAV7_CAVFA1.480e-7367.25Uncharacterized protein n=1 Tax=Cavenderia fascicu... [more]
A0A167NAZ6_PHYB83.050e-7364.29PUM-HD domain-containing protein (Fragment) n=1 Ta... [more]
D3BHB5_POLPP1.790e-7267.06Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
A0A2P6MPB1_9EUKA3.820e-7266.86Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
M9LUT9_PSEA34.530e-7265.09Translational repressor MPT5/PUF4 and related RNA-... [more]
A0A1Y2ET51_PROLT7.800e-7166.27Armadillo-type protein n=1 Tax=Protomyces lactucae... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 138..168
e-value: 4.9
score: 15.2
coord: 102..137
e-value: 3.0E-6
score: 36.8
coord: 65..101
e-value: 0.074
score: 22.2
coord: 29..64
e-value: 7.2E-9
score: 45.5
coord: 1..28
e-value: 51.0
score: 7.4
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 1..17
e-value: 3.4E-4
score: 20.1
coord: 142..168
e-value: 7.0E-7
score: 28.6
coord: 103..135
e-value: 1.3E-8
score: 34.0
coord: 70..99
e-value: 1.6E-6
score: 27.5
coord: 31..62
e-value: 2.9E-11
score: 42.4
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 29..64
score: 11.137
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 138..169
score: 8.524
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 1..28
score: 7.894
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 65..101
score: 8.454
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 102..137
score: 10.11
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..169
e-value: 2.8E-76
score: 258.3
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 1..168
NoneNo IPR availablePANTHERPTHR12537:SF13PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4coord: 1..168
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 1..169
score: 60.895
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119264contigM-pyrifera_M_contig119264:37..543 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119264.3963.1mRNA_M-pyrifera_M_contig119264.3963.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119264 37..543 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119264.3963.1 ID=prot_M-pyrifera_M_contig119264.3963.1|Name=mRNA_M-pyrifera_M_contig119264.3963.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp
MCKDQHGCRFLQKKLEEKNARVVAIVFDEVYDYIVELMTDPFGNYLCQKL
IEHCNEKQQLLIVQKVASSLVAISKNMHGTRAVQKMIECLCTPAQLQLVV
NALQAHVVELIQDLNGNHVIQRCLNRLSTTDKQFVYDAVAANCVAVATHR
HGCCVMQRCIDFASEEQKV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR033133PUM-HD
IPR016024ARM-type_fold