prot_M-pyrifera_M_contig119159.3943.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig119159.3943.1
Unique Name	prot_M-pyrifera_M_contig119159.3943.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	89

Homology

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BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot
Match: A0A5A8CUS7_CAFRO (DNA replication licensing factor MCM3 n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8CUS7_CAFRO)

HSP 1 Score: 95.5 bits (236), Expect = 5.310e-21
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 0

Query:    1 DVLSVDFLKRYFAFAK-RLPASLEDEARERISSLYNELRQKSEQRMMPVTVRTLEALIRLSTAHAKLRLSTKVLREDVDAAYEVLAFSIF 89
            ++L +DFLK++ +FAK R+   L ++ARERI++ YN+LRQKSE R MPVT RTLE +IRLSTAHAK RLS KV   DV  A  +L F+ F
Sbjct:  604 ELLDIDFLKKFVSFAKARVRPELTEDARERIAAAYNDLRQKSEARAMPVTARTLETIIRLSTAHAKARLSNKVEASDVTQAVSILQFAFF 693

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BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot
Match: A0A812WGK8_9DINO (DNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WGK8_9DINO)

HSP 1 Score: 95.5 bits (236), Expect = 5.350e-21
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 0

Query:    1 DVLSVDFLKRYFAFAK-RLPASLEDEARERISSLYNELRQKSEQRMMPVTVRTLEALIRLSTAHAKLRLSTKVLREDVDAAYEVLAFSIF 89
            ++L +DFLK++ +FAK R+   L ++ARERI++ YN+LRQKSE R MPVT RTLE +IRLSTAHAK RLS KV   DV  A  +L F+ F
Sbjct:  279 ELLDIDFLKKFVSFAKARVRPELTEDARERIAAAYNDLRQKSEARAMPVTARTLETIIRLSTAHAKARLSNKVEASDVTQAVSILQFAFF 368

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BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot
Match: A0A4D9D854_9STRA (DNA replication licensing factor MCM3 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D854_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.270e-17
Identity = 44/90 (48.89%), Postives = 67/90 (74.44%), Query Frame = 0

Query:    1 DVLSVDFLKRYFAFAK-RLPASLEDEARERISSLYNELRQKSEQRMMPVTVRTLEALIRLSTAHAKLRLSTKVLREDVDAAYEVLAFSIF 89
            D+L+ +FL++Y  +AK R+   L  EA E +++ Y+ LR K E+R +P+T RTLE LIRLSTAHAK+RLS ++ R+D + A E+LAF+++
Sbjct:  612 DILTKNFLRKYIFYAKSRIQPRLTSEAEEAVANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALY 701

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BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot
Match: UPI000644B56E (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B56E)

HSP 1 Score: 85.5 bits (210), Expect = 1.730e-17
Identity = 46/90 (51.11%), Postives = 64/90 (71.11%), Query Frame = 0

Query:    1 DVLSVDFLKRYFAFAKRL-PASLEDEARERISSLYNELRQKSEQRMMPVTVRTLEALIRLSTAHAKLRLSTKVLREDVDAAYEVLAFSIF 89
            ++LS+ F+++Y  FAK L   SL DEA+E I S Y ELR K E++ +P+T RTLE LIRLS+AHAK RLS  + + D + AYE+L  ++F
Sbjct:  585 EILSIPFIQKYIRFAKNLIKPSLSDEAKEYIVSSYTELRSKEEEKTLPITTRTLETLIRLSSAHAKCRLSPIIEKLDSEVAYEILQHALF 674

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BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot
Match: W7UAY8_9STRA (DNA replication licensing factor MCM3 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UAY8_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 2.140e-17
Identity = 44/90 (48.89%), Postives = 67/90 (74.44%), Query Frame = 0

Query:    1 DVLSVDFLKRYFAFAK-RLPASLEDEARERISSLYNELRQKSEQRMMPVTVRTLEALIRLSTAHAKLRLSTKVLREDVDAAYEVLAFSIF 89
            D+L+ +FL++Y  +AK R+   L  EA + I++ Y+ LR K E+R +P+T RTLE LIRLSTAHAK+RLS ++ R+D + A E+LAF+++
Sbjct:  228 DILTKNFLRKYIFYAKSRIQPRLTSEAEDAIANYYSTLRSKQERRTVPITPRTLETLIRLSTAHAKVRLSNEITRDDCERAMELLAFALY 317

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BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot
Match: A0A7S1G4Y5_9STRA (DNA replication licensing factor MCM3 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4Y5_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.230e-17
Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = 0

Query:    1 DVLSVDFLKRYFAFAK-RLPASLEDEARERISSLYNELRQKSEQRMMPVTVRTLEALIRLSTAHAKLRLSTKVLREDVDAAYEVLAFSIF 89
            ++LS+DF K+Y  +AK R    L DEA E I++ YN +RQK + + MPVTVR LE LIRLSTAHAK RL  KV  +DV AA  VL F+++
Sbjct:  247 ELLSIDFCKKYVHYAKQRSNPQLTDEACELIATEYNNMRQKQDAKTMPVTVRALETLIRLSTAHAKARLGRKVREDDVQAATGVLNFALY 336

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BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot
Match: A0A6A3C7E8_HIBSY (DNA replication licensing factor MCM3 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C7E8_HIBSY)

HSP 1 Score: 84.0 bits (206), Expect = 5.970e-17
Identity = 49/94 (52.13%), Postives = 66/94 (70.21%), Query Frame = 0

Query:    1 DVLSVDFLKRYFAFAK-RLPASLEDEARERISSLYNELRQKSEQRM----MPVTVRTLEALIRLSTAHAKLRLSTKVLREDVDAAYEVLAFSIF 89
            D L+++FLK+Y  +AK R+   L DEA E+I+  Y ELR  S        +P+T RTLE +IRLSTAHAKL+LS KV ++DVDAA +VL F+I+
Sbjct:  519 DTLTINFLKKYIHYAKHRIQPDLTDEASEQIAIAYAELRTASSNAKTGGTLPITARTLETIIRLSTAHAKLKLSRKVTKDDVDAALKVLNFAIY 612

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BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot
Match: UPI0010A9C427 (DNA replication licensing factor MCM3-like n=4 Tax=Maleae TaxID=721813 RepID=UPI0010A9C427)

HSP 1 Score: 83.6 bits (205), Expect = 8.190e-17
Identity = 49/94 (52.13%), Postives = 65/94 (69.15%), Query Frame = 0

Query:    1 DVLSVDFLKRYFAFAK-RLPASLEDEARERISSLYNELRQKSEQRM----MPVTVRTLEALIRLSTAHAKLRLSTKVLREDVDAAYEVLAFSIF 89
            D L++ FLK+Y  +AK R+   L DEA E+I++ Y ELR  S        +P+T RTLE +IRLSTAHAKL+LS KV + DVDAA +VL F+I+
Sbjct:  545 DTLTIKFLKKYIHYAKNRIEPDLTDEASEQIATTYAELRNASSNAKTGGTLPITARTLETIIRLSTAHAKLKLSRKVSKSDVDAALKVLNFAIY 638

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BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot
Match: A0A540L437_MALBA (DNA helicase n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540L437_MALBA)

HSP 1 Score: 83.6 bits (205), Expect = 8.290e-17
Identity = 49/94 (52.13%), Postives = 65/94 (69.15%), Query Frame = 0

Query:    1 DVLSVDFLKRYFAFAK-RLPASLEDEARERISSLYNELRQKSEQRM----MPVTVRTLEALIRLSTAHAKLRLSTKVLREDVDAAYEVLAFSIF 89
            D L++ FLK+Y  +AK R+   L DEA E+I++ Y ELR  S        +P+T RTLE +IRLSTAHAKL+LS KV + DVDAA +VL F+I+
Sbjct:  492 DTLTIKFLKKYIHYAKNRIEPDLTDEASEQIATAYAELRNASSNAKTGGTLPITARTLETIIRLSTAHAKLKLSRKVSKSDVDAALKVLNFAIY 585

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BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot
Match: A0A540LNQ5_MALBA (DNA helicase n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540LNQ5_MALBA)

HSP 1 Score: 83.6 bits (205), Expect = 8.300e-17
Identity = 49/94 (52.13%), Postives = 65/94 (69.15%), Query Frame = 0

Query:    1 DVLSVDFLKRYFAFAK-RLPASLEDEARERISSLYNELRQKSEQRM----MPVTVRTLEALIRLSTAHAKLRLSTKVLREDVDAAYEVLAFSIF 89
            D L++ FLK+Y  +AK R+   L DEA E+I++ Y ELR  S        +P+T RTLE +IRLSTAHAKL+LS KV + DVDAA +VL F+I+
Sbjct:  551 DTLTIKFLKKYIHYAKNRIEPDLTDEASEQIATAYAELRNASSNAKTGGTLPITARTLETIIRLSTAHAKLKLSRKVSKSDVDAALKVLNFAIY 644

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig119159.3943.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A5A8CUS7_CAFRO	5.310e-21	57.78	DNA replication licensing factor MCM3 n=5 Tax=Sar ...	[more]
A0A812WGK8_9DINO	5.350e-21	57.78	DNA helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=23...	[more]
A0A4D9D854_9STRA	1.270e-17	48.89	DNA replication licensing factor MCM3 n=1 Tax=Nann...	[more]
UPI000644B56E	1.730e-17	51.11	hypothetical protein n=1 Tax=Acytostelium subglobo...	[more]
W7UAY8_9STRA	2.140e-17	48.89	DNA replication licensing factor MCM3 n=2 Tax=Nann...	[more]
A0A7S1G4Y5_9STRA	2.230e-17	54.44	DNA replication licensing factor MCM3 (Fragment) n...	[more]
A0A6A3C7E8_HIBSY	5.970e-17	52.13	DNA replication licensing factor MCM3 n=1 Tax=Hibi...	[more]
UPI0010A9C427	8.190e-17	52.13	DNA replication licensing factor MCM3-like n=4 Tax...	[more]
A0A540L437_MALBA	8.290e-17	52.13	DNA helicase n=1 Tax=Malus baccata TaxID=106549 Re...	[more]
A0A540LNQ5_MALBA	8.300e-17	52.13	DNA helicase n=1 Tax=Malus baccata TaxID=106549 Re...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 23..43
None	No IPR available	GENE3D	3.40.50.300		coord: 1..89 e-value: 1.6E-22 score: 82.1
None	No IPR available	PANTHER	PTHR11630:SF46	DNA REPLICATION LICENSING FACTOR MCM3	coord: 2..89
IPR041562	MCM, AAA-lid domain	PFAM	PF17855	MCM_lid	coord: 6..87 e-value: 8.2E-24 score: 83.8
IPR031327	Mini-chromosome maintenance protein	PANTHER	PTHR11630	DNA REPLICATION LICENSING FACTOR	coord: 2..89
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig119159	contig	M-pyrifera_M_contig119159:266..532 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig119159.3943.1	mRNA_M-pyrifera_M_contig119159.3943.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig119159 266..532 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig119159.3943.1 ID=prot_M-pyrifera_M_contig119159.3943.1|Name=mRNA_M-pyrifera_M_contig119159.3943.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=89bp
DVLSVDFLKRYFAFAKRLPASLEDEARERISSLYNELRQKSEQRMMPVTV
RTLEALIRLSTAHAKLRLSTKVLREDVDAAYEVLAFSIF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR041562	MCM_lid
IPR031327	MCM
IPR027417	P-loop_NTPase