prot_M-pyrifera_M_contig119156.3941.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119156.3941.1
Unique Nameprot_M-pyrifera_M_contig119156.3941.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length176
Homology
BLAST of mRNA_M-pyrifera_M_contig119156.3941.1 vs. uniprot
Match: A0A517PIB9_9PLAN (Cytochrome c oxidase subunit 3 n=8 Tax=Gimesia TaxID=1649453 RepID=A0A517PIB9_9PLAN)

HSP 1 Score: 333 bits (855), Expect = 4.220e-113
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
Query:    1 MREMKQVVDNRAIALSGVMDPEKTEPTEDAESVEEAGVTDEKTEAIVPPVEELRQQLQTELSAEDTPAARKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVENI 176
            MREMKQVVDNRAIALSGVMDPEKTEPTEDAESVEEAGVTDEKTEAIVPPVEELRQQLQTELSAEDTPAARKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVENI
Sbjct:  141 MREMKQVVDNRAIALSGVMDPEKTEPTEDAESVEEAGVTDEKTEAIVPPVEELRQQLQTELSAEDTPAARKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVENI 316          
BLAST of mRNA_M-pyrifera_M_contig119156.3941.1 vs. uniprot
Match: A0A517Q223_9PLAN (Cytochrome c oxidase subunit 3 n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q223_9PLAN)

HSP 1 Score: 296 bits (759), Expect = 1.600e-98
Identity = 152/176 (86.36%), Postives = 169/176 (96.02%), Query Frame = 0
Query:    1 MREMKQVVDNRAIALSGVMDPEKTEPTEDAESVEEAGVTDEKTEAIVPPVEELRQQLQTELSAEDTPAARKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVENI 176
            MRE+KQVVDN+AIALSG+ DP K+EPTEDAESVEEAGV+DEKTEAIVPPVEELR+QLQT+L+AEDTP ARKKELQAYFDLE++YR LN QALEESITVP+MN+ LD LR+NPEYG+LLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGM+LFAIVL+QGKRLCEKW+DYVENI
Sbjct:  141 MRELKQVVDNQAIALSGIKDPAKSEPTEDAESVEEAGVSDEKTEAIVPPVEELRKQLQTDLTAEDTPEARKKELQAYFDLEAKYRALNAQALEESITVPQMNQELDALRKNPEYGALLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMILFAIVLIQGKRLCEKWHDYVENI 316          
BLAST of mRNA_M-pyrifera_M_contig119156.3941.1 vs. uniprot
Match: A0A517RAG9_9PLAN (Cytochrome c oxidase subunit 3 n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517RAG9_9PLAN)

HSP 1 Score: 252 bits (643), Expect = 4.530e-81
Identity = 131/177 (74.01%), Postives = 153/177 (86.44%), Query Frame = 0
Query:    1 MREMKQVVDNRAIALSGVMD-PEKTEPTEDAESVEEAGVTDEKTEAIVPPVEELRQQLQTELSAEDTPAARKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVENI 176
            MREMKQV+DNR IAL+     PEK EP    E+VE +GV DEKTEA+  P+EEL+QQL+TEL + DT AARKKEL A+F LE++YR+LN QAL+ESIT+PEMN+ L+TL++NPEYG+ LAPVHHLQPIIYGNLFASVYFLLTGFHALHV+IGM+LF IVLVQGKRLCEKWNDYVENI
Sbjct:  130 MREMKQVIDNRTIALANATKLPEKAEPANPEETVELSGVKDEKTEALETPIEELQQQLRTELDSPDTSAARKKELTAFFALENKYRELNKQALDESITLPEMNQELETLKKNPEYGAFLAPVHHLQPIIYGNLFASVYFLLTGFHALHVVIGMILFLIVLVQGKRLCEKWNDYVENI 306          
BLAST of mRNA_M-pyrifera_M_contig119156.3941.1 vs. uniprot
Match: A0A517VD70_9PLAN (Cytochrome c oxidase subunit 3 n=8 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VD70_9PLAN)

HSP 1 Score: 247 bits (630), Expect = 5.710e-79
Identity = 130/176 (73.86%), Postives = 150/176 (85.23%), Query Frame = 0
Query:    1 MREMKQVVDNRAIALSGVMDPEKTEPTEDAESVEEAGVTDEKTEAIVPPVEELRQQLQTELSAEDTPAARKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVENI 176
            MREMKQVVD R IAL+    PEKTEP +  E+VE AGVTDEKTE +  PVEELRQQLQTEL+AEDT AARK+ELQAYFDLE++YR LN +AL+ESI + +MN+ L+TL++NP YGS L PVH LQPIIYGNLFASVYFLLTGFHALHV+IGMLLF IVL+QG+RL +KW DYVENI
Sbjct:  141 MREMKQVVDQRTIALANEKLPEKTEPVDPEETVEVAGVTDEKTEEVETPVEELRQQLQTELAAEDTTAARKQELQAYFDLETKYRDLNQRALDESINMQQMNQELETLKQNPAYGSFLTPVHFLQPIIYGNLFASVYFLLTGFHALHVVIGMLLFIIVLLQGRRLSKKWKDYVENI 316          
BLAST of mRNA_M-pyrifera_M_contig119156.3941.1 vs. uniprot
Match: A0A517WUC3_9PLAN (Cytochrome c oxidase subunit 3 n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WUC3_9PLAN)

HSP 1 Score: 218 bits (556), Expect = 8.700e-68
Identity = 117/176 (66.48%), Postives = 140/176 (79.55%), Query Frame = 0
Query:    1 MREMKQVVDNRAIALSGVMDPEKTEPTEDAESVEEAGVTDEKTEAIVPPVEELRQQLQTELSAEDTPAARKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVENI 176
            M EMKQVVD R IALS V  PEK +  +  E+V        +T+ +  P+EELRQ LQTEL + DT   RKKEL A F L+S+YR+LN +AL+ESIT+PEMN+ L TL+++P+YG+ LAPVHHLQPIIYGNLFASVYFLLTGFHALHV+IGMLLF IVL+QGKRLCEKW+DYVENI
Sbjct:  141 MTEMKQVVDGRVIALSDVKPPEKLDLAKPEETVVLPETGGAETKELETPIEELRQLLQTELDSPDTSEKRKKELTALFALDSKYRELNQRALDESITLPEMNEELATLKKDPQYGAFLAPVHHLQPIIYGNLFASVYFLLTGFHALHVVIGMLLFIIVLIQGKRLCEKWSDYVENI 316          
BLAST of mRNA_M-pyrifera_M_contig119156.3941.1 vs. uniprot
Match: A0A3B1DVI0_9ZZZZ (Heme/copper-type cytochrome/quinol oxidase, subunit III, putative n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DVI0_9ZZZZ)

HSP 1 Score: 111 bits (278), Expect = 1.720e-26
Identity = 63/128 (49.22%), Postives = 79/128 (61.72%), Query Frame = 0
Query:   48 PPVEELRQQLQTELSAEDTPAARKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVEN 175
            P V +LR  L  EL        RK +L  Y  L  E++KL+N+      T+    + L  L+EN  Y  L+A VH+  PI YGNLFAS YFL+TGFHA+HV+IGMLLFAIVL QG +L   W D+VEN
Sbjct:  168 PNVAQLRIALNAELKTITEENDRKNKLTRYIGLSEEHKKLHNKIKGNGFTLHSFEEKLKELKENETYQPLMASVHNPHPIPYGNLFASCYFLMTGFHAIHVLIGMLLFAIVLKQGSQLNASWTDFVEN 295          
BLAST of mRNA_M-pyrifera_M_contig119156.3941.1 vs. uniprot
Match: A0A518CHQ7_9PLAN (Cytochrome c oxidase subunit 3 n=2 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CHQ7_9PLAN)

HSP 1 Score: 105 bits (263), Expect = 2.280e-24
Identity = 57/123 (46.34%), Postives = 82/123 (66.67%), Query Frame = 0
Query:   53 LRQQLQTELSAEDTPAARKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVEN 175
            L Q  +TEL A D  +AR KE+QA   L   Y ++N       + + ++   +D L+ N ++GSLL   H  +PI+YGN+FAS YFL+TGFHA+HV++GM+LFAIV+    RL ++W+DYVEN
Sbjct:  162 LLQTEETELKANDPDSARLKEVQAALALSIAYNEINEARRAGQLDLQKLEGRVDELKANDKFGSLLTHWHVHKPILYGNIFASTYFLMTGFHAIHVVVGMILFAIVICS--RLGDRWSDYVEN 282          
BLAST of mRNA_M-pyrifera_M_contig119156.3941.1 vs. uniprot
Match: A0A517QRW0_9PLAN (Cytochrome c oxidase subunit 3 n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QRW0_9PLAN)

HSP 1 Score: 100 bits (248), Expect = 4.910e-22
Identity = 49/106 (46.23%), Postives = 71/106 (66.98%), Query Frame = 0
Query:   70 RKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVEN 175
            +KK L+A   L +E  +L  +    S+T  +    L  + ++ +YGSLL  +H   PI+YGNLFAS YFL+TGFHA+HVI+GM+LF   L QG +L E+W+++VEN
Sbjct:  200 KKKNLEAVSALNTEVSQLKEKISANSLTYDQAGTLLHNMEKDEQYGSLLKGLHLSHPIVYGNLFASTYFLITGFHAIHVIVGMILFGTALAQGSKLNERWSNWVEN 305          
BLAST of mRNA_M-pyrifera_M_contig119156.3941.1 vs. uniprot
Match: A0A5C5X397_9PLAN (Cytochrome c oxidase subunit 3 n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X397_9PLAN)

HSP 1 Score: 99.0 bits (245), Expect = 1.120e-21
Identity = 51/120 (42.50%), Postives = 74/120 (61.67%), Query Frame = 0
Query:   56 QLQTELSAEDTPAARKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVEN 175
            QL+   + +D    R  +L+AY  L SE+ K+      + +++ +    L  L+EN  YG +++ +    PI+YGNLF+S YFL+TGFHA+HVI+GMLLF   L  G  L EKW D+VEN
Sbjct:  172 QLEVPTALQDAEGERLIQLKAYSALHSEFLKIREAISADKLSMEQAKVKLKQLQENDTYGHIVSGLRVYDPIVYGNLFSSTYFLMTGFHAIHVIVGMLLFGAALAVGTSLDEKWTDWVEN 291          
BLAST of mRNA_M-pyrifera_M_contig119156.3941.1 vs. uniprot
Match: A0A2E0SH52_9PLAN (Cytochrome oxidase subunit III n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SH52_9PLAN)

HSP 1 Score: 98.2 bits (243), Expect = 2.170e-21
Identity = 50/108 (46.30%), Postives = 73/108 (67.59%), Query Frame = 0
Query:   68 AARKKELQAYFDLESEYRKLNNQALEESITVPEMNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVIIGMLLFAIVLVQGKRLCEKWNDYVEN 175
            +AR +E+QA   L   Y +LN+      + + ++   ++ L+ N ++GSLL  +H   PI+YGN+FAS YFL+TGFHALHV+IGM+LFA+ +    RL E+W DYVEN
Sbjct:  188 SARLEEIQAVLALNIAYTELNDSRRLGELNLQDLENRVEELKANDKFGSLLESLHVYHPILYGNIFASTYFLMTGFHALHVVIGMILFAVAICA--RLSERWADYVEN 293          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119156.3941.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PIB9_9PLAN4.220e-113100.00Cytochrome c oxidase subunit 3 n=8 Tax=Gimesia Tax... [more]
A0A517Q223_9PLAN1.600e-9886.36Cytochrome c oxidase subunit 3 n=2 Tax=Gimesia pan... [more]
A0A517RAG9_9PLAN4.530e-8174.01Cytochrome c oxidase subunit 3 n=3 Tax=Gimesia Tax... [more]
A0A517VD70_9PLAN5.710e-7973.86Cytochrome c oxidase subunit 3 n=8 Tax=Planctomyce... [more]
A0A517WUC3_9PLAN8.700e-6866.48Cytochrome c oxidase subunit 3 n=2 Tax=Gimesia aqu... [more]
A0A3B1DVI0_9ZZZZ1.720e-2649.22Heme/copper-type cytochrome/quinol oxidase, subuni... [more]
A0A518CHQ7_9PLAN2.280e-2446.34Cytochrome c oxidase subunit 3 n=2 Tax=Polystyrene... [more]
A0A517QRW0_9PLAN4.910e-2246.23Cytochrome c oxidase subunit 3 n=1 Tax=Thalassoglo... [more]
A0A5C5X397_9PLAN1.120e-2142.50Cytochrome c oxidase subunit 3 n=1 Tax=Thalassoglo... [more]
A0A2E0SH52_9PLAN2.170e-2146.30Cytochrome oxidase subunit III n=1 Tax=Planctomyce... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 70..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 161..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..160
NoneNo IPR availableTMHMMTMhelixcoord: 138..160
IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleGENE3D1.20.120.80coord: 113..173
e-value: 2.3E-9
score: 39.2
IPR035973Cytochrome c oxidase subunit III-like superfamilySUPERFAMILY81452Cytochrome c oxidase subunit III-likecoord: 123..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119156contigM-pyrifera_M_contig119156:17..544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119156.3941.1mRNA_M-pyrifera_M_contig119156.3941.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119156 2..544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119156.3941.1 ID=prot_M-pyrifera_M_contig119156.3941.1|Name=mRNA_M-pyrifera_M_contig119156.3941.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
MREMKQVVDNRAIALSGVMDPEKTEPTEDAESVEEAGVTDEKTEAIVPPV
EELRQQLQTELSAEDTPAARKKELQAYFDLESEYRKLNNQALEESITVPE
MNKALDTLRENPEYGSLLAPVHHLQPIIYGNLFASVYFLLTGFHALHVII
GMLLFAIVLVQGKRLCEKWNDYVENI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013833Cyt_c_oxidase_su3_a-hlx
IPR035973Cyt_c_oxidase_su3-like_sf