prot_M-pyrifera_M_contig119124.3931.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119124.3931.1
Unique Nameprot_M-pyrifera_M_contig119124.3931.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length181
Homology
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BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A2E7KKT3_9PLAN (Sigma-54-dependent Fis family transcriptional regulator n=21 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E7KKT3_9PLAN)

HSP 1 Score: 350 bits (898), Expect = 1.440e-117
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG
Sbjct:   78 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 258
[Close]
BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A3D3W2Z6_9PLAN (Sigma-54-dependent Fis family transcriptional regulator (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3D3W2Z6_9PLAN)

HSP 1 Score: 298 bits (764), Expect = 2.550e-99
Identity = 153/181 (84.53%), Postives = 168/181 (92.82%), Query Frame = 0 
Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LR AKEELP+AEVIVLTGHGSI+SAVTAMQ GAYTYLTKPLDI+ELR+AVEKAS R+RL+RRNAEL R LDE+FGFEGVIG +PQMH IVE LKNV+ T+ TVLI+GE+GTGKELVARA+HQNS RK+KPFVPLNISALPDSILESELFGHE GAFTGA G+RIGKFEHANGGTLFLDEVG
Sbjct:   78 LRIAKEELPEAEVIVLTGHGSIHSAVTAMQHGAYTYLTKPLDITELRSAVEKASARLRLIRRNAELRRSLDERFGFEGVIGTSPQMHAIVEILKNVSPTDITVLIQGENGTGKELVARALHQNSPRKNKPFVPLNISALPDSILESELFGHEAGAFTGAQGRRIGKFEHANGGTLFLDEVG 258
[Close]
BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A3B9D1B9_9PLAN (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9D1B9_9PLAN)

HSP 1 Score: 303 bits (776), Expect = 2.960e-99
Identity = 155/181 (85.64%), Postives = 168/181 (92.82%), Query Frame = 0 
Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LR  KEELPDAEVIVLTGHGSI SAVTAMQ GAYTYLTKPLDI ELR+AVEKAS R+RL+RRNAEL R L+E+FGFEGVIGN+PQMH+IVE LKNV+ T+STVLI+GE+GTGKELVA+AIHQNS RKSKPFVPLNISALPDS LESELFGHE GAFTGAVG+RIGKFEHANGGTLFLDEVG
Sbjct:   76 LRQTKEELPDAEVIVLTGHGSITSAVTAMQHGAYTYLTKPLDIGELRSAVEKASARLRLIRRNAELRRSLEERFGFEGVIGNSPQMHRIVEILKNVSPTDSTVLIQGENGTGKELVAKAIHQNSPRKSKPFVPLNISALPDSTLESELFGHEAGAFTGAVGRRIGKFEHANGGTLFLDEVG 256
[Close]
BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A1P8WDE4_9PLAN (Transcriptional regulatory protein ZraR n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WDE4_9PLAN)

HSP 1 Score: 301 bits (770), Expect = 2.680e-98
Identity = 153/181 (84.53%), Postives = 168/181 (92.82%), Query Frame = 0 
Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            L   KEELPDAEVIVLTGHGSI SAVTAMQ GAYTYLTKPLDISELR+AVEKAS R+RL+RRNAEL R L+E+FGFEGVIGN+ QMH+I+E LKNV+ T+ST+LI+GE+GTGKELVA+AIHQNS RKSKPFVPLNISALPDSILESELFGHEQGAFTGA G+RIGKFEHANGGTLFLDEVG
Sbjct:   78 LTQVKEELPDAEVIVLTGHGSITSAVTAMQHGAYTYLTKPLDISELRSAVEKASARLRLIRRNAELRRSLEERFGFEGVIGNSSQMHRIIEILKNVSPTDSTILIQGENGTGKELVAKAIHQNSHRKSKPFVPLNISALPDSILESELFGHEQGAFTGASGRRIGKFEHANGGTLFLDEVG 258
[Close]
BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A352KYQ3_9PLAN (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A352KYQ3_9PLAN)

HSP 1 Score: 298 bits (762), Expect = 4.320e-97
Identity = 153/181 (84.53%), Postives = 168/181 (92.82%), Query Frame = 0 
Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LR AKEELP+AEVIVLTGHGSI+SAVTAMQ GAYTYLTKPLDI+ELR+AVEKAS R+RL+RRNAEL R LDE+FGFEGVIG +PQMH IVE LK+VA T+ TVLI+GE+GTGKELVARA+HQNS RK+KPFVPLNISALPDSILESELFGHE GAFTGA G+RIGKFEHANGGTLFLDEVG
Sbjct:   78 LRIAKEELPEAEVIVLTGHGSIHSAVTAMQHGAYTYLTKPLDITELRSAVEKASARLRLIRRNAELRRSLDERFGFEGVIGTSPQMHAIVEILKHVAPTDITVLIQGENGTGKELVARALHQNSPRKNKPFVPLNISALPDSILESELFGHEAGAFTGAQGRRIGKFEHANGGTLFLDEVG 258
[Close]
BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A356ACU9_9PLAN (Sigma-54-dependent Fis family transcriptional regulator n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A356ACU9_9PLAN)

HSP 1 Score: 297 bits (761), Expect = 5.940e-97
Identity = 151/181 (83.43%), Postives = 169/181 (93.37%), Query Frame = 0 
Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            L   K+ELPDAEVI+LTGHG+INSAV AMQ GAYTY+TKPLDI+ELR AVEKA+TRVRL+RRNAEL+RRLDEKFGFEGVIGN+P MHK++EKLKNVA T++TVLI+GESGTGKELVARAIHQNS+RK+KPFVPLNISALP+SILESELFGHE GAFTGA  KRIGKFE+A GGTLFLDEVG
Sbjct:   75 LERTKKELPDAEVILLTGHGTINSAVAAMQGGAYTYMTKPLDINELRTAVEKAATRVRLIRRNAELNRRLDEKFGFEGVIGNSPAMHKLIEKLKNVAPTDATVLIQGESGTGKELVARAIHQNSDRKNKPFVPLNISALPESILESELFGHEPGAFTGASTKRIGKFEYAIGGTLFLDEVG 255
[Close]
BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: UPI001EE8A1AB (sigma-54 dependent transcriptional regulator n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE8A1AB)

HSP 1 Score: 297 bits (761), Expect = 5.940e-97
Identity = 152/181 (83.98%), Postives = 167/181 (92.27%), Query Frame = 0 
Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            L   K ELPDAEVI+LTGHG+INSAV AMQ GAYTYLTKPLDI ELR AVEKA+TRVRL+RRNAEL+RRLDEKFGFEGVIGN+P MHK++EKLKNVA T++TVLI+GESGTGKELVARAIHQNS+RK+KPFVPLNISALP+SILESELFGHE GAFTGA  KRIGKFE+A GGTLFLDEVG
Sbjct:   75 LERTKNELPDAEVILLTGHGTINSAVAAMQGGAYTYLTKPLDIHELRKAVEKAATRVRLIRRNAELNRRLDEKFGFEGVIGNSPAMHKVIEKLKNVAPTDATVLIQGESGTGKELVARAIHQNSDRKNKPFVPLNISALPESILESELFGHEPGAFTGASTKRIGKFEYAIGGTLFLDEVG 255
[Close]
BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A3L7UTQ4_9BACT (Sigma-54-dependent Fis family transcriptional regulator (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7UTQ4_9BACT)

HSP 1 Score: 296 bits (759), Expect = 8.640e-97
Identity = 150/181 (82.87%), Postives = 167/181 (92.27%), Query Frame = 0 
Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LR  KEELP+AEVIVLTGHGSI SAVTAMQ GAYTYLTKPLDI ELR+AVEKAS R+RL+RRNAEL + LDE+FGFEGV+GN+PQMH I++ LK+VA T+STVLI GE+GTGKELVARA+HQNS RK+KPFVPLNISALPDSILESELFGHE GAFTGA+G+RIGKFEHANGGTLFLDEVG
Sbjct:   78 LRLTKEELPEAEVIVLTGHGSIASAVTAMQHGAYTYLTKPLDIGELRSAVEKASARLRLIRRNAELRQSLDERFGFEGVVGNSPQMHSIIDILKSVAPTDSTVLIHGENGTGKELVARALHQNSPRKNKPFVPLNISALPDSILESELFGHEAGAFTGAMGRRIGKFEHANGGTLFLDEVG 258
[Close]
BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: A0A3L7Q1Z2_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7Q1Z2_9BACT)

HSP 1 Score: 296 bits (758), Expect = 1.120e-96
Identity = 149/181 (82.32%), Postives = 170/181 (93.92%), Query Frame = 0 
Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            LR AKEELP+AEVIVLTGH SINSAVTAMQ GAYTYLTKPLDI ELR++VEKA+TR+RL+RRNA L+RRLDEKFGFEGVIGN+P M++++E+LK +A T +TVLI GESGTGKELVARA+HQNS+RK+KPFVPLNISALP+SILESELFGHEQGAFTGAV KR+GKFE+ANGGTLFLDEVG
Sbjct:   65 LRKAKEELPEAEVIVLTGHSSINSAVTAMQAGAYTYLTKPLDIQELRHSVEKAATRIRLIRRNAALNRRLDEKFGFEGVIGNSPAMNRVIEQLKALAPTEATVLILGESGTGKELVARALHQNSQRKTKPFVPLNISALPESILESELFGHEQGAFTGAVTKRVGKFEYANGGTLFLDEVG 245
[Close]
BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Match: F0SH25_RUBBR (Two component, sigma54 specific, transcriptional regulator, Fis family n=2 Tax=Rubinisphaera TaxID=1649490 RepID=F0SH25_RUBBR)

HSP 1 Score: 295 bits (754), Expect = 6.960e-96
Identity = 150/181 (82.87%), Postives = 168/181 (92.82%), Query Frame = 0 
Query:    1 LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAVEKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTNSTVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFGHEQGAFTGAVGKRIGKFEHANGGTLFLDEVG 181
            L   K ELPDAEVI+LTGHG+INSAV AMQ GAYTYLTKPLDI+ELR +VEKA++RVRL+RRNAEL+RRLDEKFGFEGVIGN+P MH+I+EKLKNVA T++TVLI+GESGTGKELVARAIHQNS+RK+K FVPLNISALP+SILESELFGHE GAFTGAV KRIGKFEHA GGTLFLDE+G
Sbjct:   77 LERTKVELPDAEVILLTGHGTINSAVAAMQGGAYTYLTKPLDINELRTSVEKAASRVRLIRRNAELNRRLDEKFGFEGVIGNSPAMHRIIEKLKNVAPTDATVLIQGESGTGKELVARAIHQNSDRKNKNFVPLNISALPESILESELFGHEAGAFTGAVTKRIGKFEHAIGGTLFLDEIG 257
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119124.3931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KKT3_9PLAN1.440e-117100.00Sigma-54-dependent Fis family transcriptional regu... [more]
A0A3D3W2Z6_9PLAN2.550e-9984.53Sigma-54-dependent Fis family transcriptional regu... [more]
A0A3B9D1B9_9PLAN2.960e-9985.64Sigma-54-dependent Fis family transcriptional regu... [more]
A0A1P8WDE4_9PLAN2.680e-9884.53Transcriptional regulatory protein ZraR n=1 Tax=Fu... [more]
A0A352KYQ3_9PLAN4.320e-9784.53Sigma-54-dependent Fis family transcriptional regu... [more]
A0A356ACU9_9PLAN5.940e-9783.43Sigma-54-dependent Fis family transcriptional regu... [more]
UPI001EE8A1AB5.940e-9783.98sigma-54 dependent transcriptional regulator n=1 T... [more]
A0A3L7UTQ4_9BACT8.640e-9782.87Sigma-54-dependent Fis family transcriptional regu... [more]
A0A3L7Q1Z2_9BACT1.120e-9682.32Sigma-54-dependent Fis family transcriptional regu... [more]
F0SH25_RUBBR6.960e-9682.87Two component, sigma54 specific, transcriptional r... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..63
NoneNo IPR availableGENE3D3.40.50.300coord: 65..181
e-value: 5.8E-37
score: 129.0
NoneNo IPR availableGENE3D3.40.50.2300coord: 1..58
e-value: 1.2E-12
score: 49.6
NoneNo IPR availablePANTHERPTHR32071:SF57coord: 11..181
NoneNo IPR availablePANTHERPTHR32071FAMILY NOT NAMEDcoord: 11..181
IPR002078RNA polymerase sigma factor 54 interaction domainPFAMPF00158Sigma54_activatcoord: 79..181
e-value: 5.2E-42
score: 143.4
IPR002078RNA polymerase sigma factor 54 interaction domainPROSITEPS50045SIGMA54_INTERACT_4coord: 79..181
score: 25.883
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 6..51
e-value: 9.4E-8
score: 32.2
IPR001789Signal transduction response regulator, receiver domainPROSITEPS50110RESPONSE_REGULATORYcoord: 1..54
score: 17.395
IPR025943Sigma-54 interaction domain, ATP-binding site 2PROSITEPS00676SIGMA54_INTERACT_2coord: 165..180
IPR025662Sigma-54 interaction domain, ATP-binding site 1PROSITEPS00675SIGMA54_INTERACT_1coord: 103..116
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 78..180
IPR011006CheY-like superfamilySUPERFAMILY52172CheY-likecoord: 2..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119124contigM-pyrifera_M_contig119124:3..545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119124.3931.1mRNA_M-pyrifera_M_contig119124.3931.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119124 3..545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119124.3931.1 ID=prot_M-pyrifera_M_contig119124.3931.1|Name=mRNA_M-pyrifera_M_contig119124.3931.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
LRTAKEELPDAEVIVLTGHGSINSAVTAMQLGAYTYLTKPLDISELRNAV
EKASTRVRLMRRNAELHRRLDEKFGFEGVIGNTPQMHKIVEKLKNVASTN
STVLIEGESGTGKELVARAIHQNSERKSKPFVPLNISALPDSILESELFG
HEQGAFTGAVGKRIGKFEHANGGTLFLDEVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002078Sigma_54_int
IPR001789Sig_transdc_resp-reg_receiver
IPR025943Sigma_54_int_dom_ATP-bd_2
IPR025662Sigma_54_int_dom_ATP-bd_1
IPR027417P-loop_NTPase
IPR011006CheY-like_superfamily