prot_M-pyrifera_M_contig118905.3884.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118905.3884.1
Unique Nameprot_M-pyrifera_M_contig118905.3884.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length55
Homology
BLAST of mRNA_M-pyrifera_M_contig118905.3884.1 vs. uniprot
Match: G7YEK6_CLOSI (ADP-ribosylation factor 1 n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=G7YEK6_CLOSI)

HSP 1 Score: 95.1 bits (235), Expect = 2.340e-24
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0
Query:    1 MGSIFAKLFNP---KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 54
            MG +F+ LFN    KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct:    1 MGQVFSNLFNRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 57          
BLAST of mRNA_M-pyrifera_M_contig118905.3884.1 vs. uniprot
Match: H3BIB3_LATCH (ADP-ribosylation factor n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3BIB3_LATCH)

HSP 1 Score: 97.8 bits (242), Expect = 2.340e-24
Identity = 51/57 (89.47%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    1 MGSIFAKLFNP---KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 54
            MGS+FAKLF+    KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct:    1 MGSLFAKLFSAFVGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 57          
BLAST of mRNA_M-pyrifera_M_contig118905.3884.1 vs. uniprot
Match: A0A8C0Y865_CYPCA (ADP ribosylation factor 1 n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C0Y865_CYPCA)

HSP 1 Score: 95.1 bits (235), Expect = 2.400e-24
Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    1 MGSIFAKLFNP--KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 54
            MG+IFA LF    KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct:    1 MGNIFANLFKVFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 56          
BLAST of mRNA_M-pyrifera_M_contig118905.3884.1 vs. uniprot
Match: A0A4S8JUZ4_MUSBA (Uncharacterized protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8JUZ4_MUSBA)

HSP 1 Score: 94.4 bits (233), Expect = 3.030e-24
Identity = 50/57 (87.72%), Postives = 51/57 (89.47%), Query Frame = 0
Query:    1 MGSIFAKLFN---PKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 54
            MG  FAKLF+    KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct:    1 MGLTFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 57          
BLAST of mRNA_M-pyrifera_M_contig118905.3884.1 vs. uniprot
Match: F6U3B3_CIOIN (Uncharacterized protein n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6U3B3_CIOIN)

HSP 1 Score: 94.7 bits (234), Expect = 3.410e-24
Identity = 50/57 (87.72%), Postives = 51/57 (89.47%), Query Frame = 0
Query:    1 MGSIFAKLFNP---KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 54
            MG  FAKLF+    KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct:    1 MGGSFAKLFSSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 57          
BLAST of mRNA_M-pyrifera_M_contig118905.3884.1 vs. uniprot
Match: A0A556V997_BAGYA (ADP-ribosylation factor 1 n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556V997_BAGYA)

HSP 1 Score: 95.5 bits (236), Expect = 4.240e-24
Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    1 MGSIFAKLFNP--KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 54
            MG+IFA LF    KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct:    1 MGNIFANLFKAFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 56          
BLAST of mRNA_M-pyrifera_M_contig118905.3884.1 vs. uniprot
Match: UPI001490699D (ADP-ribosylation factor 1 n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI001490699D)

HSP 1 Score: 97.1 bits (240), Expect = 4.340e-24
Identity = 48/54 (88.89%), Postives = 50/54 (92.59%), Query Frame = 0
Query:    1 MGSIFAKLFNPKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 54
            MG IF+ LF  KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct:    1 MGGIFSMLFKMKKDMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 54          
BLAST of mRNA_M-pyrifera_M_contig118905.3884.1 vs. uniprot
Match: UPI0007629A90 (ADP-ribosylation factor 2 isoform X2 n=1 Tax=Marmota marmota marmota TaxID=9994 RepID=UPI0007629A90)

HSP 1 Score: 94.7 bits (234), Expect = 4.510e-24
Identity = 49/57 (85.96%), Postives = 51/57 (89.47%), Query Frame = 0
Query:    1 MGSIFAKLFNP---KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 54
            MG++F KLF     KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct:    1 MGNVFEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 57          
BLAST of mRNA_M-pyrifera_M_contig118905.3884.1 vs. uniprot
Match: UPI00155EA612 (ADP-ribosylation factor 1-like n=1 Tax=Etheostoma cragini TaxID=417921 RepID=UPI00155EA612)

HSP 1 Score: 94.7 bits (234), Expect = 4.510e-24
Identity = 50/57 (87.72%), Postives = 51/57 (89.47%), Query Frame = 0
Query:    1 MGSIFAKLFNP---KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 54
            MG+IFA LF     KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct:    1 MGNIFASLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 57          
BLAST of mRNA_M-pyrifera_M_contig118905.3884.1 vs. uniprot
Match: A0A250YMI1_CASCN (ADP-ribosylation factor-like protein 17 n=1 Tax=Castor canadensis TaxID=51338 RepID=A0A250YMI1_CASCN)

HSP 1 Score: 94.7 bits (234), Expect = 4.640e-24
Identity = 50/57 (87.72%), Postives = 51/57 (89.47%), Query Frame = 0
Query:    1 MGSIFAKLFNP---KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 54
            MG+IFA LF     KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE
Sbjct:    1 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVE 57          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118905.3884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G7YEK6_CLOSI2.340e-2485.96ADP-ribosylation factor 1 n=1 Tax=Clonorchis sinen... [more]
H3BIB3_LATCH2.340e-2489.47ADP-ribosylation factor n=1 Tax=Latimeria chalumna... [more]
A0A8C0Y865_CYPCA2.400e-2489.29ADP ribosylation factor 1 n=1 Tax=Cyprinus carpio ... [more]
A0A4S8JUZ4_MUSBA3.030e-2487.72Uncharacterized protein n=1 Tax=Musa balbisiana Ta... [more]
F6U3B3_CIOIN3.410e-2487.72Uncharacterized protein n=1 Tax=Ciona intestinalis... [more]
A0A556V997_BAGYA4.240e-2489.29ADP-ribosylation factor 1 n=1 Tax=Bagarius yarrell... [more]
UPI001490699D4.340e-2488.89ADP-ribosylation factor 1 n=1 Tax=Notolabrus celid... [more]
UPI0007629A904.510e-2485.96ADP-ribosylation factor 2 isoform X2 n=1 Tax=Marmo... [more]
UPI00155EA6124.510e-2487.72ADP-ribosylation factor 1-like n=1 Tax=Etheostoma ... [more]
A0A250YMI1_CASCN4.640e-2487.72ADP-ribosylation factor-like protein 17 n=1 Tax=Ca... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePIRSFPIRSF0007096PFK_fruc_bisph_Ptasecoord: 4..53
e-value: 0.0065
score: 12.9
NoneNo IPR availableGENE3D3.40.50.300coord: 1..54
e-value: 7.7E-16
score: 59.8
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..54
NoneNo IPR availablePANTHERPTHR11711:SF314coord: 1..54
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 2..54
e-value: 2.9E-21
score: 75.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118905contigM-pyrifera_M_contig118905:4..168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118905.3884.1mRNA_M-pyrifera_M_contig118905.3884.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118905 4..518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118905.3884.1 ID=prot_M-pyrifera_M_contig118905.3884.1|Name=mRNA_M-pyrifera_M_contig118905.3884.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp
MGSIFAKLFNPKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV
ETVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006689Small_GTPase_ARF/SAR
IPR027417P-loop_NTPase