prot_M-pyrifera_M_contig118767.3865.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118767.3865.1
Unique Nameprot_M-pyrifera_M_contig118767.3865.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length55
Homology
BLAST of mRNA_M-pyrifera_M_contig118767.3865.1 vs. uniprot
Match: A0A2E8N7D5_9ACTN (ABC transporter permease n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8N7D5_9ACTN)

HSP 1 Score: 77.0 bits (188), Expect = 1.500e-15
Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 MVTSTLLGAVAVVVGLLVSFHHGTAGGATIAGLSVLQFFIVLAIREALAALRR 53
            MVTS LLGAVAVV GLLVS+HHGTAGGATIAG+SV QFF++LA+REA  AL+R
Sbjct:  222 MVTSMLLGAVAVVSGLLVSYHHGTAGGATIAGISVTQFFLLLAVREAAEALKR 274          
BLAST of mRNA_M-pyrifera_M_contig118767.3865.1 vs. uniprot
Match: A0A7Y2DSL9_9ACTN (Metal ABC transporter permease n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DSL9_9ACTN)

HSP 1 Score: 74.7 bits (182), Expect = 1.110e-14
Identity = 41/55 (74.55%), Postives = 47/55 (85.45%), Query Frame = 0
Query:    1 MVTSTLLGAVAVVVGLLVSFHHGTAGGATIAGLSVLQFFIVLAIREALAALRRTR 55
            M  S LLGA+AV+ GL+VSFH+GTAGGATIAG SVL+FF+VLA REAL ALRR R
Sbjct:  222 MAASILLGALAVIAGLVVSFHYGTAGGATIAGFSVLEFFVVLAGREALVALRRAR 276          
BLAST of mRNA_M-pyrifera_M_contig118767.3865.1 vs. uniprot
Match: A0A520Y499_9ACTN (Metal ABC transporter permease n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520Y499_9ACTN)

HSP 1 Score: 70.5 bits (171), Expect = 4.180e-13
Identity = 41/54 (75.93%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 MVTSTLLGAVAVVVGLLVSFHHGTAGGATIAGLSVLQFFIVLAIREALAALRRT 54
            M  S LLGAVAV  GLLVSFH GTAGGATIAG SVL+FF+VL  REA  ALRRT
Sbjct:  222 MALSMLLGAVAVFAGLLVSFHFGTAGGATIAGFSVLEFFVVLLAREAREALRRT 275          
BLAST of mRNA_M-pyrifera_M_contig118767.3865.1 vs. uniprot
Match: A0A2E5NQ91_9ACTN (ABC transporter permease n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5NQ91_9ACTN)

HSP 1 Score: 69.7 bits (169), Expect = 8.080e-13
Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 MVTSTLLGAVAVVVGLLVSFHHGTAGGATIAGLSVLQFFIVLAIREALAALRR 53
            M+TS LLGA+AVV GLLVS+H+ TAGGATIAG SV QFF+VLA+RE   ALRR
Sbjct:  222 MMTSILLGALAVVSGLLVSYHYNTAGGATIAGFSVAQFFLVLAVREITEALRR 274          
BLAST of mRNA_M-pyrifera_M_contig118767.3865.1 vs. uniprot
Match: A0A2E0WIL3_9CHLR (ABC transporter permease n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E0WIL3_9CHLR)

HSP 1 Score: 63.5 bits (153), Expect = 1.540e-10
Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 MVTSTLLGAVAVVVGLLVSFHHGTAGGATIAGLSVLQFFIVLAIREALAALRRTR 55
            M+ S L G ++V +GLLVSFH+GTAGGAT+AG SVLQFF+VL  R  L  +R+TR
Sbjct:  222 MLVSILFGTLSVFLGLLVSFHYGTAGGATMAGFSVLQFFVVLTGRSVLRRIRKTR 276          
BLAST of mRNA_M-pyrifera_M_contig118767.3865.1 vs. uniprot
Match: A0A4R7I3B5_9ACTN (Manganese/iron transport system permease protein n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I3B5_9ACTN)

HSP 1 Score: 63.2 bits (152), Expect = 2.080e-10
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 MVTSTLLGAVAVVVGLLVSFHHGTAGGATIAGLSVLQFFIVLAIREALAALRRTR 55
            M+ S + GAVAVV GL +SFH+GTAGGAT+AGLSV QFF+VLA  E + A+R  R
Sbjct:  220 MIVSMVFGAVAVVAGLTISFHYGTAGGATMAGLSVAQFFVVLAGVEIIRAVREYR 274          
BLAST of mRNA_M-pyrifera_M_contig118767.3865.1 vs. uniprot
Match: A0A7M3MNZ8_9ACTN (Metal ABC transporter permease n=2 Tax=Nitriliruptor sp. TaxID=2448056 RepID=A0A7M3MNZ8_9ACTN)

HSP 1 Score: 62.0 bits (149), Expect = 5.790e-10
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0
Query:    1 MVTSTLLGAVAVVVGLLVSFHHGTAGGATIAGLSVLQFFIVLAIREALAALRR 53
            M  + L+G+V+V+ GLLVSFH+GTA  ATIAGL+VL FF+VL +REA+ A+RR
Sbjct:  223 MAVAVLVGSVSVIAGLLVSFHYGTATAATIAGLTVLLFFLVLTVREAVDAVRR 275          
BLAST of mRNA_M-pyrifera_M_contig118767.3865.1 vs. uniprot
Match: A0A2E9XAH9_9ACTN (ABC transporter permease n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9XAH9_9ACTN)

HSP 1 Score: 61.6 bits (148), Expect = 7.740e-10
Identity = 33/46 (71.74%), Postives = 40/46 (86.96%), Query Frame = 0
Query:    1 MVTSTLLGAVAVVVGLLVSFHHGTAGGATIAGLSVLQFFIVLAIRE 46
            M+ S LLGA+AV VGLL+SFH+GTAGGAT+AGL VL+FF+VLA R 
Sbjct:  222 MLVSMLLGALAVFVGLLLSFHYGTAGGATVAGLCVLEFFLVLAWRS 267          
BLAST of mRNA_M-pyrifera_M_contig118767.3865.1 vs. uniprot
Match: A0A2E0EDT8_9ACTN (ABC transporter permease n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A2E0EDT8_9ACTN)

HSP 1 Score: 61.6 bits (148), Expect = 8.040e-10
Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 0
Query:    1 MVTSTLLGAVAVVVGLLVSFHHGTAGGATIAGLSVLQFFIVLAIRE 46
            M+ S  +GA+AV VGLL+SFH+GTAGGATIAGL VLQFF+VL IR 
Sbjct:  222 MLVSMFVGALAVFVGLLLSFHYGTAGGATIAGLCVLQFFLVLGIRS 267          
BLAST of mRNA_M-pyrifera_M_contig118767.3865.1 vs. uniprot
Match: A0A351DFJ5_9ACTN (Metal ABC transporter permease (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351DFJ5_9ACTN)

HSP 1 Score: 58.2 bits (139), Expect = 8.630e-10
Identity = 29/42 (69.05%), Postives = 38/42 (90.48%), Query Frame = 0
Query:    1 MVTSTLLGAVAVVVGLLVSFHHGTAGGATIAGLSVLQFFIVL 42
            M+ S L+G +AVV GLL+SFH+GTAGGAT+AG+SVL+FFIV+
Sbjct:   21 MLVSILVGFIAVVAGLLISFHYGTAGGATMAGISVLEFFIVM 62          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118767.3865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8N7D5_9ACTN1.500e-1579.25ABC transporter permease n=1 Tax=Acidimicrobiaceae... [more]
A0A7Y2DSL9_9ACTN1.110e-1474.55Metal ABC transporter permease n=1 Tax=Acidimicrob... [more]
A0A520Y499_9ACTN4.180e-1375.93Metal ABC transporter permease n=1 Tax=Acidimicrob... [more]
A0A2E5NQ91_9ACTN8.080e-1373.58ABC transporter permease n=2 Tax=Acidimicrobiaceae... [more]
A0A2E0WIL3_9CHLR1.540e-1061.82ABC transporter permease n=1 Tax=Dehalococcoidia b... [more]
A0A4R7I3B5_9ACTN2.080e-1063.64Manganese/iron transport system permease protein n... [more]
A0A7M3MNZ8_9ACTN5.790e-1062.26Metal ABC transporter permease n=2 Tax=Nitrilirupt... [more]
A0A2E9XAH9_9ACTN7.740e-1071.74ABC transporter permease n=2 Tax=Actinobacteria Ta... [more]
A0A2E0EDT8_9ACTN8.040e-1071.74ABC transporter permease n=3 Tax=Actinobacteria Ta... [more]
A0A351DFJ5_9ACTN8.630e-1069.05Metal ABC transporter permease (Fragment) n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableTMHMMTMhelixcoord: 5..22
NoneNo IPR availableTMHMMTMhelixcoord: 27..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118767contigM-pyrifera_M_contig118767:21..185 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118767.3865.1mRNA_M-pyrifera_M_contig118767.3865.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118767 6..185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118767.3865.1 ID=prot_M-pyrifera_M_contig118767.3865.1|Name=mRNA_M-pyrifera_M_contig118767.3865.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp
MVTSTLLGAVAVVVGLLVSFHHGTAGGATIAGLSVLQFFIVLAIREALAA
LRRTR
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