prot_M-pyrifera_M_contig118685.3845.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118685.3845.1
Unique Nameprot_M-pyrifera_M_contig118685.3845.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length107
Homology
BLAST of mRNA_M-pyrifera_M_contig118685.3845.1 vs. uniprot
Match: UPI000C6CADC6 (telomerase Cajal body protein 1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6CADC6)

HSP 1 Score: 91.7 bits (226), Expect = 1.780e-19
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 0
Query:    1 GIVNCFASSASAGGWLFAAGSFGRSVGLYSGRGRVRL-LRDERMGGVNQLHFSTNGLFLYAASRKSSHILCWDLRNDAKAMYSFARPAHTNQRISFSVSPAEQFLLSG 107
            GI++CFA S+S+   LFAAGS+ R++G+YS +    L L   +MGGV  L FS++G+ L++  RK   ILCWD+RN  K  YS  R   TNQR+ F +    Q+L+SG
Sbjct:  253 GIISCFAFSSSSN-HLFAAGSYCRTIGIYSAQELDLLFLLSGQMGGVTHLIFSSDGIKLFSGGRKDCEILCWDIRNPGKVFYSMRRIVTTNQRMYFDIDSTGQYLISG 359          
BLAST of mRNA_M-pyrifera_M_contig118685.3845.1 vs. uniprot
Match: A0A2B4RQF2_STYPI (Telomerase Cajal body protein 1 n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RQF2_STYPI)

HSP 1 Score: 86.7 bits (213), Expect = 1.310e-17
Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    1 GIVNCFASSASAGGWLFAAGSFGRSVGLYSGR-GRVRLLRDERMGGVNQLHFSTNGLFLYAASRKSSHILCWDLRNDAKAMYSFARPAHTNQRISFSVSPAEQFLLSG 107
            GI++C A S    G ++A GS+ +SVG+YS   G +  L   + GGV  + FS +G  LY+  RK + ILCWD+RN  K +YS  R   TNQR+ F +  + Q+++SG
Sbjct:  351 GIISCIAFSPDNSG-VYALGSYSKSVGVYSDTDGELIFLLQGQQGGVTHVMFSPDGTKLYSGGRKDNEILCWDVRNPGKVLYSMMRSVDTNQRVYFDIDRSGQYIISG 457          
BLAST of mRNA_M-pyrifera_M_contig118685.3845.1 vs. uniprot
Match: UPI00155F704E (LOW QUALITY PROTEIN: telomerase Cajal body protein 1 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=UPI00155F704E)

HSP 1 Score: 85.5 bits (210), Expect = 3.400e-17
Identity = 46/108 (42.59%), Postives = 63/108 (58.33%), Query Frame = 0
Query:    1 GIVNCFASSASAGGWLFAAGSFGRSVGLYS-GRGRVRLLRDERMGGVNQLHFSTNGLFLYAASRKSSHILCWDLRNDAKAMYSFARPAHTNQRISFSVSPAEQFLLSG 107
            GI++C A S +    L+A GS+ R+VGLYS   G    +     GG+  L FS +G  LY+  RK   ILCWDLR   + ++S  R   TNQR+ F + P+ Q+LLSG
Sbjct:  420 GIISCIAFSPAQD--LYACGSYSRTVGLYSRAEGLPIAVLQGHQGGLTHLRFSPDGTLLYSGGRKDPEILCWDLREPGRVLFSMRRAVSTNQRMYFDLEPSGQYLLSG 525          
BLAST of mRNA_M-pyrifera_M_contig118685.3845.1 vs. uniprot
Match: UPI001C0A5E87 (telomerase Cajal body protein 1 isoform X1 n=2 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C0A5E87)

HSP 1 Score: 85.1 bits (209), Expect = 4.630e-17
Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = 0
Query:    1 GIVNCFASSASAGGWLFAAGSFGRSVGLYSGRGR--VRLLRDERMGGVNQLHFSTNGLFLYAASRKSSHILCWDLRNDAKAMYSFARPAHTNQRISFSVSPAEQFLLSG 107
            GIV+C A S      L+A GS+ R+VG+YS      + LL     GG+  L F+ +G  LY  +RK   ILCWDLRN  + ++S  R  +TNQRI F + P  ++LLSG
Sbjct:  382 GIVSCMAFSPCQS--LYACGSYSRTVGVYSCEDGELLALLPPRHQGGITHLLFAPDGHHLYTGARKDKEILCWDLRNPGRVLFSIHRSVNTNQRIYFDLDPTGRYLLSG 488          
BLAST of mRNA_M-pyrifera_M_contig118685.3845.1 vs. uniprot
Match: A0A674EEL3_SALTR (Telomerase Cajal body protein 1-like n=2 Tax=Salmoninae TaxID=504568 RepID=A0A674EEL3_SALTR)

HSP 1 Score: 84.7 bits (208), Expect = 5.960e-17
Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 0
Query:    1 GIVNCFASSASAGGWLFAAGSFGRSVGLYSGR--GRVRLLRDERMGGVNQLHFSTNGLFLYAASRKSSHILCWDLRNDAKAMYSFARPAHTNQRISFSVSPAEQFLLSG 107
            GI++C A S      ++A GS+ R+ GLYS +   ++ LL     GG+  L FS +G +LY   RK   ILCWDLR+  K ++S  R   TNQRI F + P+ ++LLSG
Sbjct:  282 GIISCMAFSPCQS--VYACGSYSRTAGLYSCQDGSQLALLPPRHHGGITHLAFSPDGHYLYTGGRKDPEILCWDLRDPGKILFSLKRNVATNQRIYFDLDPSGRYLLSG 388          
BLAST of mRNA_M-pyrifera_M_contig118685.3845.1 vs. uniprot
Match: W5K705_ASTMX (WD repeat containing antisense to TP53 n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=W5K705_ASTMX)

HSP 1 Score: 84.7 bits (208), Expect = 6.170e-17
Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = 0
Query:    1 GIVNCFASSASAGGWLFAAGSFGRSVGLYSGR--GRVRLLRDERMGGVNQLHFSTNGLFLYAASRKSSHILCWDLRNDAKAMYSFARPAHTNQRISFSVSPAEQFLLSG 107
            GI++C A S S    ++A GS+ R+VGLYS      + LL     GGV  L FS +G  LY   RK   ILCWDLR+  + ++S  R   TNQRI F + P+ ++L+SG
Sbjct:  326 GIISCLAFSPSQP--VYACGSYSRTVGLYSCEDGSLLALLPQRHNGGVTHLLFSPDGYHLYTGGRKDPEILCWDLRDPGRVLFSLPRTVSTNQRIYFDLDPSGRYLMSG 432          
BLAST of mRNA_M-pyrifera_M_contig118685.3845.1 vs. uniprot
Match: A0A6P3W0N7_CLUHA (telomerase Cajal body protein 1 n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3W0N7_CLUHA)

HSP 1 Score: 84.7 bits (208), Expect = 6.250e-17
Identity = 46/109 (42.20%), Postives = 65/109 (59.63%), Query Frame = 0
Query:    1 GIVNCFASSASAGGWLFAAGSFGRSVGLYSGRGR--VRLLRDERMGGVNQLHFSTNGLFLYAASRKSSHILCWDLRNDAKAMYSFARPAHTNQRISFSVSPAEQFLLSG 107
            GI++C A S      L+A GS+ RSVG+Y+ +    + LL     GG+  L F+ NG  LY   RK   ILCWDLR+  + ++S  R  +TNQRI F + P+ ++LLSG
Sbjct:  348 GIISCMAFSPCKS--LYACGSYSRSVGVYACQDGELLALLPSRHRGGITHLLFAPNGHHLYTGGRKDKEILCWDLRDPGRVLFSVNRSVNTNQRIYFDLDPSGRYLLSG 454          
BLAST of mRNA_M-pyrifera_M_contig118685.3845.1 vs. uniprot
Match: A0A443SU65_9ACAR (Uncharacterized protein (Fragment) n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443SU65_9ACAR)

HSP 1 Score: 84.0 bits (206), Expect = 6.390e-17
Identity = 46/108 (42.59%), Postives = 64/108 (59.26%), Query Frame = 0
Query:    1 GIVNCFASSASAGGWLFAAGSFGRSVGLYSGRGRVRL-LRDERMGGVNQLHFSTNGLFLYAASRKSSHILCWDLRNDAKAMYSFARPAHTNQRISFSVSPAEQFLLSG 107
            GI++C A++      L+AAGS+G+ VG+Y       + + + + GG+  L FS +G  LY+  RK   ILCWDLRN    M++  R   TNQRI F VSP   FL+SG
Sbjct:  151 GIISCIATTPQKPS-LYAAGSYGKHVGIYDENSEEEICVLEGQNGGITHLMFSVDGNMLYSGGRKDDEILCWDLRNYGDVMFAMQRSVTTNQRIYFDVSPDGCFLVSG 257          
BLAST of mRNA_M-pyrifera_M_contig118685.3845.1 vs. uniprot
Match: A0A3B4C879_PYGNA (WD repeat containing antisense to TP53 n=2 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4C879_PYGNA)

HSP 1 Score: 84.0 bits (206), Expect = 1.150e-16
Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = 0
Query:    1 GIVNCFASSASAGGWLFAAGSFGRSVGLYSGR--GRVRLLRDERMGGVNQLHFSTNGLFLYAASRKSSHILCWDLRNDAKAMYSFARPAHTNQRISFSVSPAEQFLLSG 107
            GI++C A S S    ++  GS+ R+VGLYS      + LL     GGV  L FS +G  LY   RK   ILCWDLR+  + ++S  R  +TNQRI F + P+ ++L+SG
Sbjct:  333 GIISCLAFSPSQA--VYVCGSYSRTVGLYSCEDGSLLALLPQRHHGGVTHLLFSPDGYHLYTGGRKDPEILCWDLRDPGRVLFSLPRTINTNQRIYFDLDPSGRYLVSG 439          
BLAST of mRNA_M-pyrifera_M_contig118685.3845.1 vs. uniprot
Match: A0A2D0RD99_ICTPU (telomerase Cajal body protein 1 n=3 Tax=Ictaluridae TaxID=7996 RepID=A0A2D0RD99_ICTPU)

HSP 1 Score: 83.6 bits (205), Expect = 1.560e-16
Identity = 47/109 (43.12%), Postives = 64/109 (58.72%), Query Frame = 0
Query:    1 GIVNCFASSASAGGWLFAAGSFGRSVGLYSGR--GRVRLLRDERMGGVNQLHFSTNGLFLYAASRKSSHILCWDLRNDAKAMYSFARPAHTNQRISFSVSPAEQFLLSG 107
            GI++C A S+S    ++A GS+ R+VGLYS        LL     GGV  L FS +G  LY   RK   ILCWDLR+  + ++S  R   TNQRI F + P+ ++L+SG
Sbjct:  320 GIISCMAFSSSQP--VYACGSYSRTVGLYSCEDGSMFALLPQRHHGGVTHLLFSPDGNHLYTGGRKDPEILCWDLRDPGRVLFSLPRNVSTNQRIYFDLDPSGRYLVSG 426          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118685.3845.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C6CADC61.780e-1946.30telomerase Cajal body protein 1-like n=1 Tax=Centr... [more]
A0A2B4RQF2_STYPI1.310e-1741.67Telomerase Cajal body protein 1 n=2 Tax=Stylophora... [more]
UPI00155F704E3.400e-1742.59LOW QUALITY PROTEIN: telomerase Cajal body protein... [more]
UPI001C0A5E874.630e-1743.12telomerase Cajal body protein 1 isoform X1 n=2 Tax... [more]
A0A674EEL3_SALTR5.960e-1742.20Telomerase Cajal body protein 1-like n=2 Tax=Salmo... [more]
W5K705_ASTMX6.170e-1743.12WD repeat containing antisense to TP53 n=2 Tax=Ast... [more]
A0A6P3W0N7_CLUHA6.250e-1742.20telomerase Cajal body protein 1 n=1 Tax=Clupea har... [more]
A0A443SU65_9ACAR6.390e-1742.59Uncharacterized protein (Fragment) n=1 Tax=Leptotr... [more]
A0A3B4C879_PYGNA1.150e-1642.20WD repeat containing antisense to TP53 n=2 Tax=Ser... [more]
A0A2D0RD99_ICTPU1.560e-1643.12telomerase Cajal body protein 1 n=3 Tax=Ictalurida... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..107
e-value: 2.3E-8
score: 35.6
NoneNo IPR availablePANTHERPTHR13211UNCHARACTERIZEDcoord: 1..107
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118685contigM-pyrifera_M_contig118685:28..348 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118685.3845.1mRNA_M-pyrifera_M_contig118685.3845.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118685 28..348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118685.3845.1 ID=prot_M-pyrifera_M_contig118685.3845.1|Name=mRNA_M-pyrifera_M_contig118685.3845.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
GIVNCFASSASAGGWLFAAGSFGRSVGLYSGRGRVRLLRDERMGGVNQLH
FSTNGLFLYAASRKSSHILCWDLRNDAKAMYSFARPAHTNQRISFSVSPA
EQFLLSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf