prot_M-pyrifera_M_contig118548.3831.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118548.3831.1
Unique Nameprot_M-pyrifera_M_contig118548.3831.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length38
Homology
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BLAST of mRNA_M-pyrifera_M_contig118548.3831.1 vs. uniprot
Match: A6C2C7_9PLAN (Uncharacterized protein n=1 Tax=Gimesia maris DSM 8797 TaxID=344747 RepID=A6C2C7_9PLAN)

HSP 1 Score: 56.2 bits (134), Expect = 1.520e-9
Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0 
Query:    1 PLVHASPGNRNSRARNRTGYSNLMRVGRAPAPLR 34
            P VHASP   NSRARNRTG +NLMRVGRAPAPLR
Sbjct:   16 PKVHASPKVINSRARNRTGCTNLMRVGRAPAPLR 49
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118548.3831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A6C2C7_9PLAN1.520e-982.35Uncharacterized protein n=1 Tax=Gimesia maris DSM ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118548contigM-pyrifera_M_contig118548:117..230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118548.3831.1mRNA_M-pyrifera_M_contig118548.3831.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118548 117..230 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118548.3831.1 ID=prot_M-pyrifera_M_contig118548.3831.1|Name=mRNA_M-pyrifera_M_contig118548.3831.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp
PLVHASPGNRNSRARNRTGYSNLMRVGRAPAPLRQCA*
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