prot_M-pyrifera_M_contig118540.3830.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118540.3830.1
Unique Nameprot_M-pyrifera_M_contig118540.3830.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length118
Homology
BLAST of mRNA_M-pyrifera_M_contig118540.3830.1 vs. uniprot
Match: A0A7S2GMH3_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GMH3_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 5.480e-19
Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 0
Query:    5 ALCLVTGHV---------RQGGEGRLTRFATRQLNGLGVWLLLSSSMATKLVLMRGRFAIWYASPYVDKHGEEDVGLRRGMPLTLSTERYKALQTLWASGEITRLVTRVRSQADRVIIEGHY 117
            ALCL+TG V         R+   G  TR+A R   G G++LL+       ++L+R + A ++ S YVD +GEED G+RRG PL+LS +RY AL+ L+AS  +   V R+RS   RVII  +Y
Sbjct:  186 ALCLITGAVLTAGGKGSGRRAHAGGCTRYANRHGGGTGIFLLVRQCT---VLLVRYQHAAYFPSIYVDDNGEEDRGMRRGKPLSLSNDRYAALEALYASHRVASEVARLRSSGSRVIIRDNY 304          
BLAST of mRNA_M-pyrifera_M_contig118540.3830.1 vs. uniprot
Match: A0A7S2LK20_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LK20_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 9.540e-19
Identity = 50/126 (39.68%), Postives = 74/126 (58.73%), Query Frame = 0
Query:    5 ALCLVTGHV-------------RQGGEGRLTRFATRQLNGLGVWLLLSSSMATKLVLMRGRFAIWYASPYVDKHGEEDVGLRRGMPLTLSTERYKALQTLWASGEITRLVTRVRSQADRVIIEGHY 117
            A+C+VTGHV             +  G G+ T+ A R   G+G++ LL   +   ++L+    + +  S YVD+HGEEDVGLRRG PL L  +RY+ LQ LW+  ++ R V ++RS +DRVI +  Y
Sbjct: 1292 AICMVTGHVMLAGSSSRNGFFRQSSGPGQCTQHAERTGAGIGIFFLLHKCV---VLLIHNNKSAYSLSLYVDEHGEEDVGLRRGRPLYLHKDRYECLQKLWSQHDVPREVAQIRSTSDRVIRDNWY 1414          
BLAST of mRNA_M-pyrifera_M_contig118540.3830.1 vs. uniprot
Match: A0A7S2DU58_9STRA (E3 ubiquitin-protein ligase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DU58_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.280e-18
Identity = 52/122 (42.62%), Postives = 73/122 (59.84%), Query Frame = 0
Query:    5 ALCLVTGHV---------RQGGEGRLTRFATRQLNGLGVWLLLSSSMATKLVLMRGRFAIWYASPYVDKHGEEDVGLRRGMPLTLSTERYKALQTLWASGEITRLVTRVRSQADRVIIEGHY 117
            ALCL+TG V         R+   G  TR+A R   G G++LL+       ++L+R + A ++ S YVD +GEED G+RRG PL+LS +RY AL+ L+AS  +   V R+RS   RVII  +Y
Sbjct:  270 ALCLITGAVLTAGGKGSGRRAHAGGCTRYANRHGGGTGIFLLVRQCT---VLLVRYQHAAYFPSIYVDDNGEEDRGMRRGKPLSLSNDRYAALEALYASHRVASEVARLRSSGSRVIIRDNY 388          
BLAST of mRNA_M-pyrifera_M_contig118540.3830.1 vs. uniprot
Match: A0A7S1Z2B5_TRICV (E3 ubiquitin-protein ligase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2B5_TRICV)

HSP 1 Score: 80.5 bits (197), Expect = 6.860e-17
Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 0
Query:    4 SALCLVTGHVRQGGEGRLTRFATRQL--------------NGLGVWLLLSSSMATKLVLMRGRFAIWYASPYVDKHGEEDVGLRRGMPLTLSTERYKALQTLWASGEITRLVTRVRSQADRVIIEGHY 117
            +A+CL+TG +   G  R  R  TR                +G+G++ L+       ++L+    + + AS YVD+HGEED GLRRG PL L  ERY+AL+ LW    I R V ++RS +DRVI +  Y
Sbjct:   24 TAICLLTGAIMSSGSSR--RHYTRSTKPPGSCTLHARWVGSGIGIFFLVQKCT---VLLVHNNKSAYSASLYVDEHGEEDPGLRRGRPLFLKDERYEALEALWRRHGIPREVAQIRSTSDRVIRDNWY 146          
BLAST of mRNA_M-pyrifera_M_contig118540.3830.1 vs. uniprot
Match: A0A7S0F4Q9_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F4Q9_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.450e-16
Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 0
Query:    4 SALCLVTGHVRQGGE------------GRLTRFATRQLNGLGVWLLLSSSMATKLVLMRGRFAIWYASPYVDKHGEEDVGLRRGMPLTLSTERYKALQTLWASGEITRLVTRVRSQADRVIIEGHY 117
            +A+CL+TG V + G             G  T  A +  +G+G++ L+       ++LM    + +  S YVD+HGEED  LRRG PL L+ ERY+AL+ LW    I R V ++RS +DRVI +  Y
Sbjct:  234 TAICLLTGAVMRSGSVRRPPYTSKRPPGACTLHARKNGSGIGIFFLVQKCT---VLLMHNNKSAYSPSLYVDEHGEEDPSLRRGRPLFLNAERYRALEVLWRQQGIPREVAQIRSTSDRVIRDNWY 356          
BLAST of mRNA_M-pyrifera_M_contig118540.3830.1 vs. uniprot
Match: A0A7S1GNK1_CYCTE (E3 ubiquitin-protein ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNK1_CYCTE)

HSP 1 Score: 82.8 bits (203), Expect = 3.760e-16
Identity = 50/126 (39.68%), Postives = 71/126 (56.35%), Query Frame = 0
Query:    4 SALCLVTGHVRQGGE------------GRLTRFATRQLNGLGVWLLLSSSMATKLVLMRGRFAIWYASPYVDKHGEEDVGLRRGMPLTLSTERYKALQTLWASGEITRLVTRVRSQADRVIIEGHY 117
            +A+CL+TG V + G             G  T  A +  +G+GV+ L+       ++LM    + +  S YVD+HGEED GLRRG PL L+  RY+AL+TLW    I R V ++RS +DRVI +  Y
Sbjct:  316 TAICLLTGAVMRSGAPRRSYNRATRPAGACTLHARQVGSGIGVFFLVQKCT---VLLMHNNKSAYSPSLYVDQHGEEDPGLRRGRPLFLNEARYRALETLWRQQGIPREVAQIRSTSDRVIRDNWY 438          
BLAST of mRNA_M-pyrifera_M_contig118540.3830.1 vs. uniprot
Match: B8C846_THAPS (E3 ubiquitin-protein ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C846_THAPS)

HSP 1 Score: 82.4 bits (202), Expect = 6.680e-16
Identity = 49/125 (39.20%), Postives = 72/125 (57.60%), Query Frame = 0
Query:    4 SALCLVTGHVRQGGE-----------GRLTRFATRQLNGLGVWLLLSSSMATKLVLMRGRFAIWYASPYVDKHGEEDVGLRRGMPLTLSTERYKALQTLWASGEITRLVTRVRSQADRVIIEGHY 117
            +A+CL+TG V + G            G  T  A +  +G+G++ L+       ++LM    + +  S YVD+HGEEDVGLRRG PL  S ER +AL+ LW +  I R V+++RS +DRVI +  Y
Sbjct: 3372 TAICLLTGAVMKSGTIRRTKRDFRPPGACTLHARKVGSGIGIFFLVQKCT---ILLMHNNKSAYSPSLYVDEHGEEDVGLRRGRPLFFSEERNQALERLWRTHGIPREVSQIRSTSDRVIRDNWY 3493          
BLAST of mRNA_M-pyrifera_M_contig118540.3830.1 vs. uniprot
Match: A0A7S0C9S2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9S2_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.040e-15
Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 0
Query:    1 GEVSALCLVTGHVRQGGE------------GRLTRFATRQLNGLGVWLLLSSSMATKLVLMRGRFAIWYASPYVDKHGEEDVGLRRGMPLTLSTERYKALQTLWASGEITRLVTRVRSQADRVIIEGHY 117
            G  +A+CL+TG V + G             G  T  A +  +G+GV+ L+       ++LM    + + AS YVD+HGEED GLRRG PL L   RY++L+ LW    I R V ++RS +DRVI +  Y
Sbjct:  347 GSETAICLLTGSVMRSGSLRRSLITPSRPHGSCTVHARKVGSGIGVFFLVQKCT---VLLMHNNKSAYSASLYVDEHGEEDPGLRRGRPLFLKKTRYESLKFLWRQHGIPREVAQIRSTSDRVIRDNWY 472          
BLAST of mRNA_M-pyrifera_M_contig118540.3830.1 vs. uniprot
Match: B7G3L3_PHATC (E3 ubiquitin-protein ligase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G3L3_PHATC)

HSP 1 Score: 80.5 bits (197), Expect = 2.920e-15
Identity = 47/127 (37.01%), Postives = 70/127 (55.12%), Query Frame = 0
Query:    4 SALCLVTGHVRQGGEGRLTRF-------------ATRQLNGLGVWLLLSSSMATKLVLMRGRFAIWYASPYVDKHGEEDVGLRRGMPLTLSTERYKALQTLWASGEITRLVTRVRSQADRVIIEGHY 117
            +A+CL+TG V + G  R + +             A +  +G+G++ L+       ++LM    + +  S YVD+HGEED GLRRG PL L+  RY AL+ LW    I R V ++RS +DRVI +  Y
Sbjct:  547 TAICLLTGTVMRSGSARRSGYNRAHRLAGACTIHARKNGSGIGIFFLVQKCT---VLLMHNNKSAYSPSLYVDEHGEEDPGLRRGRPLFLNQARYHALEQLWRQNGIPREVAQIRSTSDRVIRDNWY 670          
BLAST of mRNA_M-pyrifera_M_contig118540.3830.1 vs. uniprot
Match: A0A7S2MIJ1_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MIJ1_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.220e-15
Identity = 46/126 (36.51%), Postives = 70/126 (55.56%), Query Frame = 0
Query:    4 SALCLVTGHVRQGGEGR------------LTRFATRQLNGLGVWLLLSSSMATKLVLMRGRFAIWYASPYVDKHGEEDVGLRRGMPLTLSTERYKALQTLWASGEITRLVTRVRSQADRVIIEGHY 117
            +A+CL+TG + + G  R             T  A +  +G+G++ L+       ++LM    + +  S YVD+HGEED GLRRG PL L  ER+++L+ LW    I R V ++RS +DRVI +  Y
Sbjct:  281 TAICLLTGSIMRSGSSRRAFPRSSRQPGACTLHARKVGSGVGIFFLVQKCT---VLLMHNNKSAYSPSLYVDEHGEEDPGLRRGRPLFLKNERFQSLEMLWRQHGIPREVAQIRSTSDRVIRDNWY 403          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118540.3830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2GMH3_9STRA5.480e-1942.62E3 ubiquitin-protein ligase n=1 Tax=Dictyocha spec... [more]
A0A7S2LK20_9STRA9.540e-1939.68E3 ubiquitin-protein ligase n=1 Tax=Leptocylindrus... [more]
A0A7S2DU58_9STRA1.280e-1842.62E3 ubiquitin-protein ligase n=2 Tax=Dictyocha spec... [more]
A0A7S1Z2B5_TRICV6.860e-1738.28E3 ubiquitin-protein ligase n=1 Tax=Trieres chinen... [more]
A0A7S0F4Q9_9STRA3.450e-1638.10E3 ubiquitin-protein ligase n=1 Tax=Craspedostauro... [more]
A0A7S1GNK1_CYCTE3.760e-1639.68E3 ubiquitin-protein ligase n=1 Tax=Cyclophora ten... [more]
B8C846_THAPS6.680e-1639.20E3 ubiquitin-protein ligase n=1 Tax=Thalassiosira ... [more]
A0A7S0C9S2_9STRA1.040e-1538.76E3 ubiquitin-protein ligase n=1 Tax=Proboscia iner... [more]
B7G3L3_PHATC2.920e-1537.01E3 ubiquitin-protein ligase n=2 Tax=Phaeodactylum ... [more]
A0A7S2MIJ1_9STRA4.220e-1536.51E3 ubiquitin-protein ligase n=1 Tax=Helicotheca ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21497:SF24E3 UBIQUITIN-PROTEIN LIGASE UBR1coord: 4..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
IPR039164E3 ubiquitin-protein ligase UBR1-likePANTHERPTHR21497UBIQUITIN LIGASE E3 ALPHA-RELATEDcoord: 4..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118540contigM-pyrifera_M_contig118540:154..507 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118540.3830.1mRNA_M-pyrifera_M_contig118540.3830.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118540 154..507 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118540.3830.1 ID=prot_M-pyrifera_M_contig118540.3830.1|Name=mRNA_M-pyrifera_M_contig118540.3830.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp
GEVSALCLVTGHVRQGGEGRLTRFATRQLNGLGVWLLLSSSMATKLVLMR
GRFAIWYASPYVDKHGEEDVGLRRGMPLTLSTERYKALQTLWASGEITRL
VTRVRSQADRVIIEGHY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039164UBR1-like