prot_M-pyrifera_M_contig118354.3796.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118354.3796.1
Unique Nameprot_M-pyrifera_M_contig118354.3796.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length104
Homology
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BLAST of mRNA_M-pyrifera_M_contig118354.3796.1 vs. uniprot
Match: A0A7S3M211_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M211_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 5.580e-7
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 0 
Query:   20 RMLWIPAVFFAVRVWGSIRVVLGAA---GSDAVEFAPLVYLQALLDPSQGLINSFIFVLAHSTARRGIWDAAVALYRRL 95
            ++  +P V F +RVW S+R++L  A     +   F  +  +QAL DPSQG+ N+ +FVLA    R  ++DA   L+RR+
Sbjct:  324 KLAAVPIVLFLIRVWSSLRIILHFAHPHSDNGDSFFEV--MQALFDPSQGIFNALLFVLASPEDRHSMFDAFDLLFRRI 400
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118354.3796.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3M211_9STRA5.580e-737.97Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118354contigM-pyrifera_M_contig118354:36..347 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118354.3796.1mRNA_M-pyrifera_M_contig118354.3796.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118354 36..347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118354.3796.1 ID=prot_M-pyrifera_M_contig118354.3796.1|Name=mRNA_M-pyrifera_M_contig118354.3796.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp
ASPAPFPDVPVSSPPVAVRRMLWIPAVFFAVRVWGSIRVVLGAAGSDAVE
FAPLVYLQALLDPSQGLINSFIFVLAHSTARRGIWDAAVALYRRLTLPCS
RSDN
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