prot_M-pyrifera_M_contig118307.3786.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118307.3786.1
Unique Nameprot_M-pyrifera_M_contig118307.3786.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length58
Homology
BLAST of mRNA_M-pyrifera_M_contig118307.3786.1 vs. uniprot
Match: A0A3M8G720_9BACT (RagB/SusD family nutrient uptake outer membrane protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G720_9BACT)

HSP 1 Score: 106 bits (264), Expect = 1.510e-25
Identity = 47/58 (81.03%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    1 DRWWNSLYQGIRRANVVIEKVPLIEMDEQLKSRYVAEAQFLRGSYYFDLVRAFGGVPL 58
            DRWWN+LY GIRRANVVIE VPLI+MDE+L++RYVAEA+FLR S+YFDLVR FGGVPL
Sbjct:  102 DRWWNTLYLGIRRANVVIESVPLIQMDEELRARYVAEAKFLRASFYFDLVRGFGGVPL 159          
BLAST of mRNA_M-pyrifera_M_contig118307.3786.1 vs. uniprot
Match: A0A2E9UFS9_9BACT (RagB/SusD family nutrient uptake outer membrane protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2E9UFS9_9BACT)

HSP 1 Score: 106 bits (264), Expect = 1.520e-25
Identity = 47/58 (81.03%), Postives = 53/58 (91.38%), Query Frame = 0
Query:    1 DRWWNSLYQGIRRANVVIEKVPLIEMDEQLKSRYVAEAQFLRGSYYFDLVRAFGGVPL 58
            DRWWN+LYQGIRRANVVIEKVP+I M+E LK+RY+ EAQFLR  YYFDLVR+FGGVPL
Sbjct:  102 DRWWNALYQGIRRANVVIEKVPVIPMNESLKARYIGEAQFLRALYYFDLVRSFGGVPL 159          
BLAST of mRNA_M-pyrifera_M_contig118307.3786.1 vs. uniprot
Match: A0A7X7LIQ7_9BACT (RagB/SusD family nutrient uptake outer membrane protein (Fragment) n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X7LIQ7_9BACT)

HSP 1 Score: 100 bits (250), Expect = 1.870e-25
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 DRWWNSLYQGIRRANVVIEKVPLIEMDEQLKSRYVAEAQFLRGSYYFDLVRAFGGVPL 58
            DRWW +LY+GI+RANVVIEKVP IEMD  L+ RY+AEA FLRG YYFDLVRA+GGVPL
Sbjct:  103 DRWWATLYEGIKRANVVIEKVPEIEMDTNLRGRYIAEAHFLRGLYYFDLVRAWGGVPL 160          
BLAST of mRNA_M-pyrifera_M_contig118307.3786.1 vs. uniprot
Match: A0A3D1G866_9BACT (RagB/SusD family nutrient uptake outer membrane protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1G866_9BACT)

HSP 1 Score: 105 bits (262), Expect = 2.950e-25
Identity = 46/58 (79.31%), Postives = 52/58 (89.66%), Query Frame = 0
Query:    1 DRWWNSLYQGIRRANVVIEKVPLIEMDEQLKSRYVAEAQFLRGSYYFDLVRAFGGVPL 58
            DRWWN+LYQGIRRAN+VIEK+P +EMD  L+ RYVAEA+FLR  YYFDLVRAFGGVPL
Sbjct:  104 DRWWNALYQGIRRANIVIEKIPQVEMDASLQERYVAEAKFLRALYYFDLVRAFGGVPL 161          
BLAST of mRNA_M-pyrifera_M_contig118307.3786.1 vs. uniprot
Match: A0A6C1P445_9BACT (RagB/SusD family nutrient uptake outer membrane protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6C1P445_9BACT)

HSP 1 Score: 104 bits (260), Expect = 5.520e-25
Identity = 47/58 (81.03%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 DRWWNSLYQGIRRANVVIEKVPLIEMDEQLKSRYVAEAQFLRGSYYFDLVRAFGGVPL 58
            DRWW  LYQGIRRANVVIEKVP +EMD  LK+RY+ EA+FLRG YYFDLVRAFGGVPL
Sbjct:  103 DRWWAGLYQGIRRANVVIEKVPAVEMDASLKNRYLGEARFLRGLYYFDLVRAFGGVPL 160          
BLAST of mRNA_M-pyrifera_M_contig118307.3786.1 vs. uniprot
Match: A0A521BWD6_9BACT (Starch-binding associating with outer membrane n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521BWD6_9BACT)

HSP 1 Score: 104 bits (260), Expect = 5.550e-25
Identity = 45/58 (77.59%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    1 DRWWNSLYQGIRRANVVIEKVPLIEMDEQLKSRYVAEAQFLRGSYYFDLVRAFGGVPL 58
            DRWWN LY+GIRRAN+V+++VP IEM+E LK+RY+AEA+FLRG YYFDLVRAFGGVPL
Sbjct:  104 DRWWNVLYEGIRRANIVVQEVPTIEMNENLKNRYLAEARFLRGLYYFDLVRAFGGVPL 161          
BLAST of mRNA_M-pyrifera_M_contig118307.3786.1 vs. uniprot
Match: A0A838TAY1_9BACT (RagB/SusD family nutrient uptake outer membrane protein n=1 Tax=Chitinophagales bacterium TaxID=2448779 RepID=A0A838TAY1_9BACT)

HSP 1 Score: 104 bits (260), Expect = 5.750e-25
Identity = 46/58 (79.31%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    1 DRWWNSLYQGIRRANVVIEKVPLIEMDEQLKSRYVAEAQFLRGSYYFDLVRAFGGVPL 58
            DRWWN+LY+GI+RANVVIEKVP I+MDE LK+RY+AEA+FLR  YYFDLVRA+GGVPL
Sbjct:  107 DRWWNALYEGIKRANVVIEKVPAIQMDEGLKNRYIAEAKFLRALYYFDLVRAWGGVPL 164          
BLAST of mRNA_M-pyrifera_M_contig118307.3786.1 vs. uniprot
Match: UPI001F45F5F3 (RagB/SusD family nutrient uptake outer membrane protein n=1 Tax=Rhodohalobacter sp. 614A TaxID=2908649 RepID=UPI001F45F5F3)

HSP 1 Score: 103 bits (258), Expect = 1.060e-24
Identity = 46/58 (79.31%), Postives = 54/58 (93.10%), Query Frame = 0
Query:    1 DRWWNSLYQGIRRANVVIEKVPLIEMDEQLKSRYVAEAQFLRGSYYFDLVRAFGGVPL 58
            DRWWN+LY+GI+RANVV+EKV  I+MD+QLKSRY+AEA FLRG YYFDLVRA+GGVPL
Sbjct:  103 DRWWNALYEGIKRANVVLEKVEPIQMDQQLKSRYLAEASFLRGLYYFDLVRAWGGVPL 160          
BLAST of mRNA_M-pyrifera_M_contig118307.3786.1 vs. uniprot
Match: A0A2E6N6Y5_9BACT (RagB/SusD family nutrient uptake outer membrane protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2E6N6Y5_9BACT)

HSP 1 Score: 102 bits (255), Expect = 2.740e-24
Identity = 44/58 (75.86%), Postives = 51/58 (87.93%), Query Frame = 0
Query:    1 DRWWNSLYQGIRRANVVIEKVPLIEMDEQLKSRYVAEAQFLRGSYYFDLVRAFGGVPL 58
            DRWWN LYQGIRRANVVIEK+PLI MDE LK++Y+ EA+FLR  YYFDLVRAFG +P+
Sbjct:  102 DRWWNGLYQGIRRANVVIEKLPLITMDESLKNKYIGEAKFLRALYYFDLVRAFGSIPI 159          
BLAST of mRNA_M-pyrifera_M_contig118307.3786.1 vs. uniprot
Match: A0A6I5IB28_9BACT (RagB/SusD family nutrient uptake outer membrane protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A6I5IB28_9BACT)

HSP 1 Score: 102 bits (253), Expect = 5.250e-24
Identity = 44/57 (77.19%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    1 DRWWNSLYQGIRRANVVIEKVPLIEMDEQLKSRYVAEAQFLRGSYYFDLVRAFGGVP 57
            DRWW++LY+GI+RANVVIEKVP I M+EQL++RY+AEA FLRG +YFDLVRAFGGVP
Sbjct:  105 DRWWSALYEGIKRANVVIEKVPSINMNEQLRNRYIAEASFLRGLFYFDLVRAFGGVP 161          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118307.3786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M8G720_9BACT1.510e-2581.03RagB/SusD family nutrient uptake outer membrane pr... [more]
A0A2E9UFS9_9BACT1.520e-2581.03RagB/SusD family nutrient uptake outer membrane pr... [more]
A0A7X7LIQ7_9BACT1.870e-2577.59RagB/SusD family nutrient uptake outer membrane pr... [more]
A0A3D1G866_9BACT2.950e-2579.31RagB/SusD family nutrient uptake outer membrane pr... [more]
A0A6C1P445_9BACT5.520e-2581.03RagB/SusD family nutrient uptake outer membrane pr... [more]
A0A521BWD6_9BACT5.550e-2577.59Starch-binding associating with outer membrane n=1... [more]
A0A838TAY1_9BACT5.750e-2579.31RagB/SusD family nutrient uptake outer membrane pr... [more]
UPI001F45F5F31.060e-2479.31RagB/SusD family nutrient uptake outer membrane pr... [more]
A0A2E6N6Y5_9BACT2.740e-2475.86RagB/SusD family nutrient uptake outer membrane pr... [more]
A0A6I5IB28_9BACT5.250e-2477.19RagB/SusD family nutrient uptake outer membrane pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.890coord: 1..58
e-value: 2.4E-23
score: 84.3
NoneNo IPR availablePANTHERPTHR35148FAMILY NOT NAMEDcoord: 3..58
IPR033985SusD-like, N-terminalPFAMPF14322SusD-like_3coord: 4..57
e-value: 7.5E-13
score: 49.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118307contigM-pyrifera_M_contig118307:254..427 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118307.3786.1mRNA_M-pyrifera_M_contig118307.3786.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118307 254..427 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118307.3786.1 ID=prot_M-pyrifera_M_contig118307.3786.1|Name=mRNA_M-pyrifera_M_contig118307.3786.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=58bp
DRWWNSLYQGIRRANVVIEKVPLIEMDEQLKSRYVAEAQFLRGSYYFDLV
RAFGGVPL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033985SusD-like_N
IPR011990TPR-like_helical_dom_sf