prot_M-pyrifera_M_contig118200.3771.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118200.3771.1
Unique Nameprot_M-pyrifera_M_contig118200.3771.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length48
Homology
BLAST of mRNA_M-pyrifera_M_contig118200.3771.1 vs. uniprot
Match: A0A4T0WZZ5_9ASCO (Chromatin modification-related protein n=1 Tax=[Candida] inconspicua TaxID=52247 RepID=A0A4T0WZZ5_9ASCO)

HSP 1 Score: 53.5 bits (127), Expect = 5.190e-7
Identity = 19/47 (40.43%), Postives = 28/47 (59.57%), Query Frame = 0
Query:    2 EIEEEQYIACDHPLCQTGWYRWRDVGLMSADSVPEGKWYCPDCRASP 48
            ++   + +ACD+P C+  W+ +  VGL     +P G WYCPDCR  P
Sbjct:  243 QVSYGEMVACDNPTCKYEWFHYDCVGLKE---IPNGVWYCPDCRKDP 286          
BLAST of mRNA_M-pyrifera_M_contig118200.3771.1 vs. uniprot
Match: UPI000711FF53 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711FF53)

HSP 1 Score: 48.1 bits (113), Expect = 3.630e-5
Identity = 18/39 (46.15%), Postives = 24/39 (61.54%), Query Frame = 0
Query:    7 QYIACDHPLCQTGWYRWRDVGLMSADSVPEGKWYCPDCR 45
            + I CD+  C   W+    VGL   D++PEG WYCP+CR
Sbjct:  181 EMIGCDNDNCTIKWFHLHCVGL---DTIPEGSWYCPNCR 216          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118200.3771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A4T0WZZ5_9ASCO5.190e-740.43Chromatin modification-related protein n=1 Tax=[Ca... [more]
UPI000711FF533.630e-546.15hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..46
e-value: 4.4E-11
score: 44.6
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 5..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118200contigM-pyrifera_M_contig118200:47..190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118200.3771.1mRNA_M-pyrifera_M_contig118200.3771.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118200 44..190 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118200.3771.1 ID=prot_M-pyrifera_M_contig118200.3771.1|Name=mRNA_M-pyrifera_M_contig118200.3771.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=48bp
MEIEEEQYIACDHPLCQTGWYRWRDVGLMSADSVPEGKWYCPDCRASP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD