prot_M-pyrifera_M_contig118016.3742.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig118016.3742.1
Unique Name	prot_M-pyrifera_M_contig118016.3742.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	119

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig118016.3742.1 vs. uniprot
Match: A0A5A8C7Y3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C7Y3_CAFRO)

HSP 1 Score: 77.0 bits (188), Expect = 1.830e-15
Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 0

Query:   13 VIYNGRDPDEGKKKLRGVGKRALMAMNNHAEQMGHCILAVFLCLLSRGGMDSTSWTVAGVAWAHSATRFLHLVCFLADVEWLRSLSFGIGLILNYVLWILIFI 115
            V ++ +D    K  LRG GKRA++AMNNHAEQ+    LA  L +  R G+  T W V+GV    +  R  HL C+LAD++ LRSLSF    +L   L++++F+
Sbjct:   50 VAFDNKDQTASKAGLRGWGKRAMLAMNNHAEQLPQFGLAALLNVAVRSGV--TPWAVSGVMAGVAVFRGAHLACYLADLDGLRSLSFLGSSLLTLALYVMVFV 150

[Close]

BLAST of mRNA_M-pyrifera_M_contig118016.3742.1 vs. uniprot
Match: A0A812PKR9_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PKR9_9DINO)

HSP 1 Score: 77.0 bits (188), Expect = 6.400e-15
Identity = 44/103 (42.72%), Postives = 63/103 (61.17%), Query Frame = 0

Query:   13 VIYNGRDPDEGKKKLRGVGKRALMAMNNHAEQMGHCILAVFLCLLSRGGMDSTSWTVAGVAWAHSATRFLHLVCFLADVEWLRSLSFGIGLILNYVLWILIFI 115
            V ++ +D    K  LRG GKRA++AMNNHAEQ+    LA  L +  R G+  T W V+GV    +  R  HL C+LAD++ LRSLSF    +L   L++++F+
Sbjct:  111 VAFDNKDQTASKAGLRGWGKRAMLAMNNHAEQLPQFGLAALLNVAVRSGV--TPWAVSGVMAGVAVFRGAHLACYLADLDGLRSLSFLGSSLLTLALYVMVFV 211

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig118016.3742.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig118016.3742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A5A8C7Y3_CAFRO	1.830e-15	42.72	Uncharacterized protein n=2 Tax=Cafeteria roenberg...	[more]
A0A812PKR9_9DINO	6.400e-15	42.72	Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001129	Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein	PFAM	PF01124	MAPEG	coord: 16..114 e-value: 2.3E-16 score: 59.9
IPR023352	Membrane associated eicosanoid/glutathione metabolism-like domain superfamily	GENE3D	1.20.120.550		coord: 11..115 e-value: 6.4E-11 score: 44.2
IPR023352	Membrane associated eicosanoid/glutathione metabolism-like domain superfamily	SUPERFAMILY	161084	MAPEG domain-like	coord: 12..112
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 116..118
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 90..95
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 42..61
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..41
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 62..66
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 96..115
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 67..89
None	No IPR available	TMHMM	TMhelix		coord: 93..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig118016	contig	M-pyrifera_M_contig118016:156..512 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig118016.3742.1	mRNA_M-pyrifera_M_contig118016.3742.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig118016 156..512 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig118016.3742.1 ID=prot_M-pyrifera_M_contig118016.3742.1|Name=mRNA_M-pyrifera_M_contig118016.3742.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp
VGSGTKEGGGGKVIYNGRDPDEGKKKLRGVGKRALMAMNNHAEQMGHCIL
AVFLCLLSRGGMDSTSWTVAGVAWAHSATRFLHLVCFLADVEWLRSLSFG
IGLILNYVLWILIFIPSV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001129	Membr-assoc_MAPEG
IPR023352	MAPEG-like_dom_sf