prot_M-pyrifera_M_contig117964.3722.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117964.3722.1
Unique Nameprot_M-pyrifera_M_contig117964.3722.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length143
Homology
BLAST of mRNA_M-pyrifera_M_contig117964.3722.1 vs. uniprot
Match: A0A8J4GBS2_9CHLO (V-type proton ATPase subunit C n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GBS2_9CHLO)

HSP 1 Score: 81.3 bits (199), Expect = 2.390e-15
Identity = 54/143 (37.76%), Postives = 76/143 (53.15%), Query Frame = 0
Query:    7 VYWCVSVEAEKGREDAVFQRLSQLGGEAATCSRFA--VPQLRVGTLDMLMSLSDSLVKTDHTVENVTRKIGQYLTALRDTLNEGRSSHARADLTVSVQHDDGRSLTLGDDQYLQKFTWIERRFPK----KMTCDALAKRLSEV 143
            VYW VS+     R DA+++ L +    +  C+ F   +P+LR+GTLD LM+LSD L KT + VE V  K+       R  +NE   + A A LTV     +G S     D Y+Q+F W E +FP     K T D +A+ +S V
Sbjct:    2 VYWLVSLHLHNKRRDAIWELLQERTSASMLCTNFKLDIPELRIGTLDSLMALSDELSKTSNMVEGVIAKV-------RRQINESGGAKALATLTV-----EGAST----DVYVQRFKWDEAKFPTRRLLKETVDKMAELVSRV 128          
BLAST of mRNA_M-pyrifera_M_contig117964.3722.1 vs. uniprot
Match: A0A7S4HZY1_9EUKA (V-type proton ATPase subunit C n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HZY1_9EUKA)

HSP 1 Score: 80.5 bits (197), Expect = 5.040e-15
Identity = 50/136 (36.76%), Postives = 75/136 (55.15%), Query Frame = 0
Query:    8 YWCVSVEAEKGREDAVFQRLSQLGGEAATCSRFAVP-QLRVGTLDMLMSLSDSLVKTDHTVENVTRKIGQYLTALRDTLNEGRSSHARADLTVSVQHDDGRSLTLGDDQYLQKFTWIERRFPKKMTCDALAKRLSE 142
            YW +SV ++  RE A +  + Q     A CS+F VP  LRVGTLD LMS+SD LVK DH VE+  +KIGQ +  LR+T  E  +      + +++    G SL+     Y+++F W   ++  +++   L  R  E
Sbjct:    7 YWIISVPSKPSRESA-YSSIQQCTNGLADCSKFNVPTNLRVGTLDSLMSMSDELVKVDHMVEHTAKKIGQQIYTLRETKPEPGT------IFLNIG---GASLS----DYIKRFQWDTAKYSVRLSVSDLTNRFQE 128          
BLAST of mRNA_M-pyrifera_M_contig117964.3722.1 vs. uniprot
Match: D9CJ64_VOLCA (V-type proton ATPase subunit C n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D9CJ64_VOLCA)

HSP 1 Score: 78.2 bits (191), Expect = 3.080e-14
Identity = 48/139 (34.53%), Postives = 77/139 (55.40%), Query Frame = 0
Query:    7 VYWCVSVEAEKGREDAVFQRLSQLGGEAATCS--RFAVPQLRVGTLDMLMSLSDSLVKTDHTVENVTRKIGQYLTALRDTLNEGRSSHARADLTVSVQHDDGRSLTLGDDQYLQKFTWIERRFPKKMTCDALAKRLSEV 143
            VYW VS++  + R+DAV++ L +    +  C+  +  VP+LR+GTLD L++LSD L K+ +T+E V  K+       R  +NE     A A LTV     +G S     D Y+Q+F W E RFP +     +  +++++
Sbjct:    2 VYWLVSLKLHEKRKDAVWELLQERTSASMLCTTHKLDVPELRIGTLDSLLALSDELSKSSNTIEAVLAKV-------RRQINESGGVKALAGLTV-----EGMST----DVYVQRFRWDEARFPTRRVLKEMVDKMTDL 124          
BLAST of mRNA_M-pyrifera_M_contig117964.3722.1 vs. uniprot
Match: Q9XXU9-2 (Isoform b of V-type proton ATPase subunit C n=1 Tax=Caenorhabditis elegans TaxID=6239 RepID=Q9XXU9-2)

HSP 1 Score: 73.2 bits (178), Expect = 7.880e-14
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:    8 YWCVSVEAEKGREDAVFQRLSQLGGEAATCSRFAVPQLRVGTLDMLMSLSDSLVKTDHTVENVTRKIGQYLTALRDTLNEGRSSHARADLTVSVQHDDGR 107
            YW +SV  EKG  DA + +L++  G  +T S++ +P L+VGTLD L+ LSD L K D + E V RK+ QY T   + L E +S  A  +L +  +H+D R
Sbjct:    9 YWLISVPGEKGANDA-WDKLNRSTGNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDTSAEAVIRKLVQYFT---EVLEEDKSKIAE-NLVIGNRHEDVR 103          
BLAST of mRNA_M-pyrifera_M_contig117964.3722.1 vs. uniprot
Match: VATC_CAEEL (V-type proton ATPase subunit C n=9 Tax=Caenorhabditis TaxID=6237 RepID=VATC_CAEEL)

HSP 1 Score: 76.3 bits (186), Expect = 1.560e-13
Identity = 49/143 (34.27%), Postives = 76/143 (53.15%), Query Frame = 0
Query:    8 YWCVSVEAEKGREDAVFQRLSQLGGEAATCSRFAVPQLRVGTLDMLMSLSDSLVKTDHTVENVTRKIGQYLTALRDTLNEGRSSHARADLTVSVQHDDGRSLTLGDDQ---YLQKFTWIERRFPKKMTCDALA----KRLSEV 143
            YW +SV  EKG  DA + +L++  G  +T S++ +P L+VGTLD L+ LSD L K D + E V RK+ QY T   + L E +S  A              +L +G+     Y+ KF W   ++P K +   L+    K++S++
Sbjct:    9 YWLISVPGEKGANDA-WDKLNRSTGNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDTSAEAVIRKLVQYFT---EVLEEDKSKIAE-------------NLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSEIIGKQISQI 134          
BLAST of mRNA_M-pyrifera_M_contig117964.3722.1 vs. uniprot
Match: A0A016TUK9_9BILA (V-type proton ATPase subunit C n=8 Tax=Ancylostomatidae TaxID=33278 RepID=A0A016TUK9_9BILA)

HSP 1 Score: 76.3 bits (186), Expect = 1.840e-13
Identity = 48/143 (33.57%), Postives = 74/143 (51.75%), Query Frame = 0
Query:    1 MSKGKDVYWCVSVEAEKGREDAVFQRLSQLGGEAATCSRFAVPQLRVGTLDMLMSLSDSLVKTDHTVENVTRKIGQYLTALRDTLNEGRSSHARADLTVSVQHDDGRSLTLGDDQYLQKFTWIERRFPKKMTCDALAKRLSEV 143
            MS     YW +S   EKG  DA + +L++     +  S+F +P L+VGTLD L+ LSD L K D T E VTRK+ QY     D L + RS  A     + + + D ++       Y+ +F W   ++P K +   L++ + +V
Sbjct:    1 MSVSSGEYWLISAPGEKGANDA-WDKLNRATSNLSNNSKFNIPDLKVGTLDQLVGLSDDLSKLDSTAEAVTRKLVQYF---GDVLEDDRSKLAE---NLLINNKDIKT-------YVTRFQWEGAKYPLKQSLKVLSEIIGKV 129          
BLAST of mRNA_M-pyrifera_M_contig117964.3722.1 vs. uniprot
Match: A0A183G630_HELPZ (V-type proton ATPase subunit C n=3 Tax=Strongylida TaxID=6308 RepID=A0A183G630_HELPZ)

HSP 1 Score: 75.9 bits (185), Expect = 2.330e-13
Identity = 47/143 (32.87%), Postives = 77/143 (53.85%), Query Frame = 0
Query:    1 MSKGKDVYWCVSVEAEKGREDAVFQRLSQLGGEAATCSRFAVPQLRVGTLDMLMSLSDSLVKTDHTVENVTRKIGQYLTALRDTLNEGRSSHARADLTVSVQHDDGRSLTLGDDQYLQKFTWIERRFPKKMTCDALAKRLSEV 143
            MS     YW +S   EKG  DA + +L++     ++ S+F +P L+VGTLD L+ LSD L K D+T E VTRK+ QY     + L + +S  A  +L ++     G+ +      Y+ KF W   ++P K +   L++ + ++
Sbjct:    1 MSVSSGEYWLISAPGEKGANDA-WDKLNRATSNLSSNSKFNIPDLKVGTLDQLVGLSDDLGKLDNTAEGVTRKLVQYF---GEVLEDDKSKLAE-NLLIN-----GKDIKT----YVTKFQWEGAKYPLKQSLKVLSEIIQDI 129          
BLAST of mRNA_M-pyrifera_M_contig117964.3722.1 vs. uniprot
Match: A0A0N4Y3X5_NIPBR (V-type proton ATPase subunit C n=2 Tax=Strongylida TaxID=6308 RepID=A0A0N4Y3X5_NIPBR)

HSP 1 Score: 75.1 bits (183), Expect = 4.430e-13
Identity = 48/137 (35.04%), Postives = 71/137 (51.82%), Query Frame = 0
Query:    1 MSKGKDVYWCVSVEAEKGREDAVFQRLSQLGGEAATCSRFAVPQLRVGTLDMLMSLSDSLVKTDHTVENVTRKIGQYLTALRDTLNEGRSSHARADLTVSVQHDDGRSLTLGDDQYLQKFTWIERRFPKKMTCDALA 137
            MS     YW +S   EKG  DA + +L++     +  S+F +P L+VGTLD L+ LSD L K D T E VTRK+ QY     + L + RS  A  +L ++     G+ +      Y+ KF W   ++P K +   L+
Sbjct:    1 MSVSSGEYWLISAPGEKGANDA-WDKLNRATSNISNNSKFNIPDLKVGTLDQLVGLSDDLTKLDTTAEGVTRKLVQYF---GEVLEDDRSKLAE-NLLIN-----GKDMKT----YVTKFQWEGAKYPLKQSLKVLS 123          
BLAST of mRNA_M-pyrifera_M_contig117964.3722.1 vs. uniprot
Match: A0A0N4WME7_HAEPC (V-type proton ATPase subunit C n=2 Tax=Haemonchus TaxID=6288 RepID=A0A0N4WME7_HAEPC)

HSP 1 Score: 73.2 bits (178), Expect = 1.960e-12
Identity = 46/137 (33.58%), Postives = 69/137 (50.36%), Query Frame = 0
Query:    1 MSKGKDVYWCVSVEAEKGREDAVFQRLSQLGGEAATCSRFAVPQLRVGTLDMLMSLSDSLVKTDHTVENVTRKIGQYLTALRDTLNEGRSSHARADLTVSVQHDDGRSLTLGDDQYLQKFTWIERRFPKKMTCDALA 137
            MS     YW +S   EKG  DA + +L++     +  S+F +P L+VGTLD L+ LSD L K D T E VTRK+ QY     + L + R   A     + + + D ++       Y+ KF W   ++P K +   L+
Sbjct:    1 MSVSSGEYWLISAPGEKGPNDA-WDKLNRATSNLSNNSKFNIPDLKVGTLDQLVGLSDDLSKLDSTAEAVTRKLVQYF---GEVLEDDRGKLAE---NLQINNKDIKT-------YVTKFQWEGAKYPLKQSLKVLS 123          
BLAST of mRNA_M-pyrifera_M_contig117964.3722.1 vs. uniprot
Match: A0A0D8XU66_DICVI (V-type proton ATPase subunit C n=1 Tax=Dictyocaulus viviparus TaxID=29172 RepID=A0A0D8XU66_DICVI)

HSP 1 Score: 70.1 bits (170), Expect = 2.830e-11
Identity = 46/137 (33.58%), Postives = 68/137 (49.64%), Query Frame = 0
Query:    1 MSKGKDVYWCVSVEAEKGREDAVFQRLSQLGGEAATCSRFAVPQLRVGTLDMLMSLSDSLVKTDHTVENVTRKIGQYLTALRDTLNEGRSSHARADLTVSVQHDDGRSLTLGDDQYLQKFTWIERRFPKKMTCDALA 137
            MS     YW +S   EKG  DA + +L++     +T  +F +P L+VGTLD L+ LSD L K D   E V RK+ QY     D L + RS  A     + + + D ++       Y+ KF W   ++P K +   L+
Sbjct:  152 MSAMSGEYWLLSAPGEKGANDA-WDKLNRATSNLSTNYKFNIPDLKVGTLDQLVGLSDDLGKLDSAAEAVARKLVQYF---GDVLEDDRSKLAE---NLLINNKDMKT-------YVTKFQWEGAKYPLKQSLKVLS 274          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117964.3722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4GBS2_9CHLO2.390e-1537.76V-type proton ATPase subunit C n=1 Tax=Volvox reti... [more]
A0A7S4HZY1_9EUKA5.040e-1536.76V-type proton ATPase subunit C n=1 Tax=Vannella sp... [more]
D9CJ64_VOLCA3.080e-1434.53V-type proton ATPase subunit C n=1 Tax=Volvox cart... [more]
Q9XXU9-27.880e-1442.00Isoform b of V-type proton ATPase subunit C n=1 Ta... [more]
VATC_CAEEL1.560e-1334.27V-type proton ATPase subunit C n=9 Tax=Caenorhabdi... [more]
A0A016TUK9_9BILA1.840e-1333.57V-type proton ATPase subunit C n=8 Tax=Ancylostoma... [more]
A0A183G630_HELPZ2.330e-1332.87V-type proton ATPase subunit C n=3 Tax=Strongylida... [more]
A0A0N4Y3X5_NIPBR4.430e-1335.04V-type proton ATPase subunit C n=2 Tax=Strongylida... [more]
A0A0N4WME7_HAEPC1.960e-1233.58V-type proton ATPase subunit C n=2 Tax=Haemonchus ... [more]
A0A0D8XU66_DICVI2.830e-1133.58V-type proton ATPase subunit C n=1 Tax=Dictyocaulu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004907ATPase, V1 complex, subunit CPFAMPF03223V-ATPase_Ccoord: 8..141
e-value: 3.1E-20
score: 72.9
IPR004907ATPase, V1 complex, subunit CPANTHERPTHR10137V-TYPE PROTON ATPASE SUBUNIT Ccoord: 6..141
NoneNo IPR availableGENE3D1.20.1460.10coord: 42..143
e-value: 5.9E-16
score: 61.3
NoneNo IPR availablePANTHERPTHR10137:SF0V-TYPE PROTON ATPASE SUBUNIT Ccoord: 6..141
IPR036132Vacuolar ATP synthase subunit C superfamilySUPERFAMILY118203Vacuolar ATP synthase subunit Ccoord: 6..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117964contigM-pyrifera_M_contig117964:105..533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117964.3722.1mRNA_M-pyrifera_M_contig117964.3722.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117964 105..533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117964.3722.1 ID=prot_M-pyrifera_M_contig117964.3722.1|Name=mRNA_M-pyrifera_M_contig117964.3722.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp
MSKGKDVYWCVSVEAEKGREDAVFQRLSQLGGEAATCSRFAVPQLRVGTL
DMLMSLSDSLVKTDHTVENVTRKIGQYLTALRDTLNEGRSSHARADLTVS
VQHDDGRSLTLGDDQYLQKFTWIERRFPKKMTCDALAKRLSEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004907ATPase_V1-cplx_csu
IPR036132Vac_ATP_synth_c_sf