prot_M-pyrifera_M_contig117867.3697.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117867.3697.1
Unique Nameprot_M-pyrifera_M_contig117867.3697.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length136
Homology
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BLAST of mRNA_M-pyrifera_M_contig117867.3697.1 vs. uniprot
Match: A0A8D9EXC3_9HEMI (Zinc finger protein 2 (Fragment) n=2 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9EXC3_9HEMI)

HSP 1 Score: 56.2 bits (134), Expect = 2.900e-7
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 0 
Query:    4 CGRSFKTSGGLRQHVSSFHDGVRYGCSRCSKSFTSRSNLRVH 45
            C +SF   G L +HV S H+G++Y CS+CSKSF  RSNLR H
Sbjct:    2 CPKSFSRKGELNKHVRSTHEGIKYPCSKCSKSFLDRSNLRRH 43
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BLAST of mRNA_M-pyrifera_M_contig117867.3697.1 vs. uniprot
Match: A0A8D9FGU2_9HEMI (Zinc finger protein 614 n=6 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D9FGU2_9HEMI)

HSP 1 Score: 51.2 bits (121), Expect = 9.370e-5
Identity = 19/45 (42.22%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:    1 CDSCGRSFKTSGGLRQHVSSFHDGVRYGCSRCSKSFTSRSNLRVH 45
            C +CG++FK    +  H  +FH+GVRY C++C K F ++S L +H
Sbjct:  413 CGTCGKNFKFKNSMVTHRKTFHEGVRYKCTKCPKIFMAQSKLNIH 457
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117867.3697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A8D9EXC3_9HEMI2.900e-757.14Zinc finger protein 2 (Fragment) n=2 Tax=Cacopsyll... [more]
A0A8D9FGU2_9HEMI9.370e-542.22Zinc finger protein 614 n=6 Tax=Cacopsylla melanon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 1..22
e-value: 20.0
score: 10.7
coord: 109..132
e-value: 0.9
score: 18.6
coord: 81..104
e-value: 0.095
score: 21.8
coord: 54..76
e-value: 8.7E-4
score: 28.6
coord: 27..49
e-value: 0.009
score: 25.2
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 1..22
e-value: 9.3E-4
score: 19.5
coord: 54..76
e-value: 2.2E-5
score: 24.6
coord: 109..132
e-value: 0.0029
score: 18.0
coord: 29..49
e-value: 1.3E-4
score: 22.3
coord: 81..104
e-value: 1.7E-4
score: 21.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 56..76
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 111..132
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 29..49
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 1..22
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 83..104
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 109..135
score: 10.928
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 54..81
score: 12.653
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 1..27
score: 11.385
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 81..109
score: 11.552
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 27..54
score: 13.152
NoneNo IPR availableGENE3D3.30.160.60coord: 53..78
e-value: 8.0E-7
score: 30.5
NoneNo IPR availableGENE3D3.30.160.60coord: 79..135
e-value: 2.8E-10
score: 42.1
coord: 1..52
e-value: 1.5E-12
score: 49.4
NoneNo IPR availablePANTHERPTHR24379FAMILY NOT NAMEDcoord: 53..132
coord: 1..79
NoneNo IPR availablePANTHERPTHR24379:SF67BLOODY FINGERS-RELATEDcoord: 53..132
coord: 1..79
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 24..72
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 62..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117867contigM-pyrifera_M_contig117867:133..540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117867.3697.1mRNA_M-pyrifera_M_contig117867.3697.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117867 133..540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117867.3697.1 ID=prot_M-pyrifera_M_contig117867.3697.1|Name=mRNA_M-pyrifera_M_contig117867.3697.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp
CDSCGRSFKTSGGLRQHVSSFHDGVRYGCSRCSKSFTSRSNLRVHEAVHD
GVRYPCSRCSKSFTDRSSLNRHKARHDGVEHVCGDCGKKYKDRSSLGAHR
KAVHLGVRYPCGECSKSFTTKHYALLHRKKAHGVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf