prot_M-pyrifera_M_contig117829.3690.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig117829.3690.1
Unique Name	prot_M-pyrifera_M_contig117829.3690.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	179

Homology

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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A5A8DMH1_CAFRO (AP-2 complex subunit alpha n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DMH1_CAFRO)

HSP 1 Score: 230 bits (587), Expect = 2.710e-67
Identity = 112/177 (63.28%), Postives = 145/177 (81.92%), Query Frame = 0

Query:    3 LTAILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 179
            LT +L    VT+SLN NNA HAILFEA+ +I+++G     +LR++A +HL+++V+I+E N+RYLGL  +T++A+LPGTRE +L+QQK I IS KE DISLRR ALDLLF  CG+DNA EIVGEL+  L+ AD AI+ EMVLKIAILAERFAP+LRWYVD +L+L+AHAGD+V+DDIW
Sbjct:  280 LTDVLRGTPVTKSLNHNNASHAILFEAINIIIRYGTNGPASLRERAVEHLSKYVNIREPNVRYLGLEGLTRMASLPGTREQVLRQQKAILISLKERDISLRRRALDLLFATCGRDNAEEIVGELVTHLITADSAIRSEMVLKIAILAERFAPNLRWYVDVVLKLLAHAGDHVSDDIW 456

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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A1Z5K119_FISSO (AP-2 complex subunit alpha n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K119_FISSO)

HSP 1 Score: 203 bits (516), Expect = 2.570e-57
Identity = 103/177 (58.19%), Postives = 138/177 (77.97%), Query Frame = 0

Query:    3 LTAILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 179
            ++ IL+   V+ S+N++NA+HA+LFEA+ LI+ WG  +  ALRD A + L +F+S++E NIRYLGL+ M KLA L G+ E+I K Q  + +S K+ADIS+RR ALDLLFV+C  DNA  IV EL+  LV+AD AI+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GD+V+D IW
Sbjct:  364 ISKILTETDVSDSINKSNADHAVLFEAVNLIICWGSTSQQALRDGAMKLLGKFISVREPNIRYLGLMTMAKLAQLEGSGESIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVIADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDAIW 540

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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S1Y9P9_9STRA (AP-2 complex subunit alpha n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y9P9_9STRA)

HSP 1 Score: 201 bits (511), Expect = 8.490e-57
Identity = 103/174 (59.20%), Postives = 134/174 (77.01%), Query Frame = 0

Query:    6 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 179
            IL+   V+ S+N++NA+HA+LFEA+ LI+ WG      LRD A + L +F+S++E NIRYLGL+ M KLA L G+ E+I K Q  + +S K+ADIS+RR ALDLLFV+C  DNA  IV EL+  LVLAD AI+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GD+V+D IW
Sbjct:  260 ILTETDVSDSINKSNADHAVLFEAVNLIVVWGSSGPVQLRDGAMKLLGKFISVREPNIRYLGLMTMAKLAQLDGSAESIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVLADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDPIW 433

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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S1BCA8_9STRA (AP-2 complex subunit alpha n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCA8_9STRA)

HSP 1 Score: 200 bits (508), Expect = 2.760e-56
Identity = 100/174 (57.47%), Postives = 136/174 (78.16%), Query Frame = 0

Query:    6 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 179
            IL+   V+ S+N++NA+HAILFEA+ LI+ WG     ALRD A + L +F+S++E NIRYLGL+ M +LA L G+ E++ K Q  + +S K+ADIS+RR ALDLLFV+C  DNA +IV EL+ +L +AD AI+EEMVLKIAILAE++A DL+WYVDTIL+LI+ +GD+V+D IW
Sbjct:  289 ILTETDVSDSINKSNADHAILFEAVNLIVIWGAAGPTALRDGAMRLLGKFISVREPNIRYLGLMTMARLAQLEGSAESVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAEKIVNELVVYLTVADAAIREEMVLKIAILAEKYATDLKWYVDTILKLISISGDHVSDSIW 462

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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S2WLX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLX7_9STRA)

HSP 1 Score: 198 bits (503), Expect = 3.040e-56
Identity = 101/174 (58.05%), Postives = 133/174 (76.44%), Query Frame = 0

Query:    6 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 179
            IL+   V+ S+N++NA+HA+LFEA+ LI+ WG      LRD A + L +F+S++E NIRYLGL+ M KLA L G+ E + K Q  + +S K+ADIS+RR ALDLLFV+C  DN+  IV EL+  LVLAD AI+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GD+V+D IW
Sbjct:  338 ILTETDVSDSINKSNADHAVLFEAVNLIVCWGESGPVQLRDGAMKLLGKFISVREPNIRYLGLMTMAKLAQLEGSAEGVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNSERIVDELVAHLVLADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDPIW 511

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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S2XJT4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XJT4_9STRA)

HSP 1 Score: 195 bits (496), Expect = 8.030e-56
Identity = 102/174 (58.62%), Postives = 132/174 (75.86%), Query Frame = 0

Query:    6 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 179
            IL+   V+ S+N++NA+HAILFEA+ LI+ WG  A   LR+ A Q L +F+S++E NIRYLGL+ M KLA + G+ E + K Q  + +S K+ADIS+RR ALDLLFV+C  DNA  IV EL+  LVLAD AI+EEMVLKIAILAE++A DLRWYVDTI++LI  +GD V+D IW
Sbjct:  325 ILTETDVSDSINKSNADHAILFEAVNLIVIWGINAPIQLREGAMQLLGKFISVREPNIRYLGLMTMAKLAQIEGSGEGVKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVANLVLADAAIREEMVLKIAILAEKYATDLRWYVDTIIKLITISGDNVSDAIW 498

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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A1E7FR64_9STRA (AP-2 complex subunit alpha n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FR64_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.310e-55
Identity = 102/174 (58.62%), Postives = 132/174 (75.86%), Query Frame = 0

Query:    6 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 179
            IL+   V+ S+N++NA+HAILFEA+ LI+ WG      LR+ A + L +F+S++E NIRYLGL+ M KLA L GT E+I K Q  + +S K+ADIS+RR AL LLFV+C  DNA  IV EL+  L LAD AI+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GD+V+D IW
Sbjct:  312 ILTETDVSDSINKSNADHAILFEAVNLIVTWGSSGPSQLREGAMKLLGKFISVREPNIRYLGLLTMAKLAQLEGTAESIKKHQSTVLVSLKDADISVRRRALGLLFVMCDTDNAERIVDELVAHLALADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVSDAIW 485

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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: K0R582_THAOC (AP-2 complex subunit alpha n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R582_THAOC)

HSP 1 Score: 198 bits (503), Expect = 1.530e-55
Identity = 102/174 (58.62%), Postives = 131/174 (75.29%), Query Frame = 0

Query:    6 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 179
            IL    V+ S+N++NA+HAILFEA+ LI+ WG      LR+ A Q L +F+S++E NIRYLGL+ M KLA + G+ E   K Q  + +S K+ADIS+RR ALDLLFVIC  DNA  +V EL+  LV+AD +I+EEMVLKIAILAE++A DLRWYVDTIL+LI+ AGDYV+D IW
Sbjct:  312 ILMETDVSDSINKSNADHAILFEAVQLIVAWGTTCPVTLREGAMQLLGKFISVREPNIRYLGLMTMAKLAQIEGSVEGAKKHQATVLVSLKDADISVRRRALDLLFVICDTDNAERVVDELVAHLVVADASIREEMVLKIAILAEKYATDLRWYVDTILKLISIAGDYVSDSIW 485

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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S2L0R2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L0R2_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.720e-55
Identity = 100/177 (56.50%), Postives = 133/177 (75.14%), Query Frame = 0

Query:    3 LTAILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 179
            +T I+   +V+ S+N++NA+HAILFEA+ LI+ WG    P +R+ A   L +F+S++E NIRYLGL  M +LA + G+ E   K Q  + +S K+ADIS+RR ALDLLFVIC  DNA  IV EL+  LV+AD +I+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GDYV+D IW
Sbjct:  315 VTRIMFETEVSDSINKSNADHAILFEAVNLIVAWGTTCPPEMREGAMNILGKFISVREPNIRYLGLSTMAQLAQIDGSVEGAKKHQATVLVSLKDADISVRRRALDLLFVICDTDNAERIVDELVAHLVVADASIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDYVSDPIW 491

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BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Match: A0A7S2ULM5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULM5_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.810e-55
Identity = 98/174 (56.32%), Postives = 131/174 (75.29%), Query Frame = 0

Query:    6 ILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQHLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADISLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAERFAPDLRWYVDTILELIAHAGDYVTDDIW 179
            IL+   V+ S+N++NA+HA+LFEA+ LI+ WG      LR+ A + L +F+S++E NIRYLGL+ M +LA +  + E I K Q  + +S K+ADIS+RR ALDLLFV+C  DNA  IV EL+  LV+AD AI+EEMVLKIAILAE++A DLRWYVDTIL+LI+ +GD+V D IW
Sbjct:  315 ILTETDVSDSINKSNADHAVLFEALNLIVVWGGSGPQQLREAAMKLLGKFISVREPNIRYLGLMTMARLAQIETSGEGIKKHQATVLVSLKDADISVRRRALDLLFVMCDTDNAERIVDELVAHLVVADAAIREEMVLKIAILAEKYATDLRWYVDTILKLISISGDHVNDAIW 488

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig117829.3690.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A5A8DMH1_CAFRO	2.710e-67	63.28	AP-2 complex subunit alpha n=3 Tax=Cafeteria roenb...	[more]
A0A1Z5K119_FISSO	2.570e-57	58.19	AP-2 complex subunit alpha n=2 Tax=Fistulifera sol...	[more]
A0A7S1Y9P9_9STRA	8.490e-57	59.20	AP-2 complex subunit alpha n=1 Tax=Grammatophora o...	[more]
A0A7S1BCA8_9STRA	2.760e-56	57.47	AP-2 complex subunit alpha n=1 Tax=Corethron hystr...	[more]
A0A7S2WLX7_9STRA	3.040e-56	58.05	Hypothetical protein (Fragment) n=1 Tax=Eucampia a...	[more]
A0A7S2XJT4_9STRA	8.030e-56	58.62	Hypothetical protein (Fragment) n=1 Tax=Attheya se...	[more]
A0A1E7FR64_9STRA	1.310e-55	58.62	AP-2 complex subunit alpha n=2 Tax=Bacillariaceae ...	[more]
K0R582_THAOC	1.530e-55	58.62	AP-2 complex subunit alpha n=1 Tax=Thalassiosira o...	[more]
A0A7S2L0R2_9STRA	1.720e-55	56.50	Hypothetical protein (Fragment) n=2 Tax=Skeletonem...	[more]
A0A7S2ULM5_9STRA	1.810e-55	56.32	Hypothetical protein (Fragment) n=1 Tax=Attheya se...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	PFAM	PF01602	Adaptin_N	coord: 6..179 e-value: 4.6E-31 score: 108.0
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1..179 e-value: 5.8E-52 score: 178.8
None	No IPR available	PANTHER	PTHR22780:SF4	AP-2 COMPLEX SUBUNIT ALPHA	coord: 6..179
None	No IPR available	PANTHER	PTHR22780	ADAPTIN, ALPHA/GAMMA/EPSILON	coord: 6..179
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 5..177

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig117829	contig	M-pyrifera_M_contig117829:15..551 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig117829.3690.1	mRNA_M-pyrifera_M_contig117829.3690.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig117829 15..551 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig117829.3690.1 ID=prot_M-pyrifera_M_contig117829.3690.1|Name=mRNA_M-pyrifera_M_contig117829.3690.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp
TALTAILSNIQVTRSLNRNNAEHAILFEAMGLILKWGPRADPALRDQAAQ
HLARFVSIKEANIRYLGLVNMTKLAALPGTRETILKQQKFIFISFKEADI
SLRRAALDLLFVICGKDNAMEIVGELLRFLVLADVAIKEEMVLKIAILAE
RFAPDLRWYVDTILELIAHAGDYVTDDIW

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002553	Clathrin/coatomer_adapt-like_N
IPR011989	ARM-like
IPR016024	ARM-type_fold