prot_M-pyrifera_M_contig117431.3602.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117431.3602.1
Unique Nameprot_M-pyrifera_M_contig117431.3602.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length183
Homology
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BLAST of mRNA_M-pyrifera_M_contig117431.3602.1 vs. uniprot
Match: C1MY89_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MY89_MICPC)

HSP 1 Score: 58.2 bits (139), Expect = 1.050e-6
Identity = 44/123 (35.77%), Postives = 64/123 (52.03%), Query Frame = 0 
Query:   26 PARAYALFADAAAQGNAKALFEQGLMSAVGMGVPQNPALAEQHLRKAAGQGLADAQFQLGFMLTRATAASADVAAQTRARERQHEG-VQWLGQAAEQGHCKAQTKLGILYFKGVAVAKDNEKA 147
            PAR +  F  AAAQG   A +  GL    G+GV +N + A +   KAA +G   AQ + G++L               +    +EG ++W  +AA QG+ +A+  +GILYF GV V +D  KA
Sbjct:   77 PAREW--FLKAAAQGATLAEYNLGLFYDYGLGVEENKSTAAEFFLKAAKKGHDRAQCEFGYILY--------------SERNDYEGAMKWYQKAAAQGYAQAEYNIGILYFYGVGVERDEAKA 183
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117431.3602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
C1MY89_MICPC1.050e-635.77Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 42..77
e-value: 4.0E-4
score: 29.7
coord: 5..41
e-value: 1.8
score: 17.6
coord: 124..159
e-value: 6.9E-10
score: 48.8
coord: 78..123
e-value: 90.0
score: 5.4
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 108..123
e-value: 0.52
score: 11.1
coord: 125..158
e-value: 4.6E-9
score: 36.6
coord: 160..180
e-value: 0.093
score: 13.4
coord: 49..76
e-value: 0.0069
score: 17.0
coord: 6..41
e-value: 3.5
score: 8.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..106
e-value: 5.8E-19
score: 70.7
coord: 107..183
e-value: 7.7E-25
score: 90.1
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 3..179
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 2..90
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 107..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117431contigM-pyrifera_M_contig117431:5..553 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117431.3602.1mRNA_M-pyrifera_M_contig117431.3602.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117431 5..553 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117431.3602.1 ID=prot_M-pyrifera_M_contig117431.3602.1|Name=mRNA_M-pyrifera_M_contig117431.3602.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=183bp
AQGFAEAQVTLGEILKEGCEFLGADPARAYALFADAAAQGNAKALFEQGL
MSAVGMGVPQNPALAEQHLRKAAGQGLADAQFQLGFMLTRATAASADVAA
QTRARERQHEGVQWLGQAAEQGHCKAQTKLGILYFKGVAVAKDNEKAYHW
YTKAAEQGIPEAQTNLGLMYTNGHGVAKDTAYG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf