prot_M-pyrifera_M_contig117426.3599.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117426.3599.1
Unique Nameprot_M-pyrifera_M_contig117426.3599.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length112
Homology
BLAST of mRNA_M-pyrifera_M_contig117426.3599.1 vs. uniprot
Match: A0A7S4M827_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M827_9EUKA)

HSP 1 Score: 85.5 bits (210), Expect = 7.290e-18
Identity = 47/84 (55.95%), Postives = 62/84 (73.81%), Query Frame = 0
Query:   18 LAYNSQARLDAVHQIESTMVELNSIMMEVSTMVAEQGEVVERISRDIDDANEHVLGAQEQLLKYLSSVSSNRGLILKMLFVLVI 101
            L Y+ QARLDA+  IE TM +LN IM+++S MV EQ  V+ERI  ++ D+  HV  AQ QL+K L +VSS+RGLILKM F+LV+
Sbjct:  184 LRYDGQARLDAIQDIERTMNDLNKIMVDISVMVEEQQVVMERIDNNVGDSLVHVERAQNQLIKILQNVSSDRGLILKMFFILVV 267          
BLAST of mRNA_M-pyrifera_M_contig117426.3599.1 vs. uniprot
Match: A9SZH2_PHYPA (Qa-SNARE, SYP3/Sed5p/Syntaxin 5-type n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9SZH2_PHYPA)

HSP 1 Score: 85.5 bits (210), Expect = 2.050e-17
Identity = 55/111 (49.55%), Postives = 74/111 (66.67%), Query Frame = 0
Query:    3 GPGGQQSQALVQQSSLA----YNSQARLDAVHQIESTMVELNSIMMEVSTMVAEQGEVVERISRDIDDANEHVLGAQEQLLKYLSSVSSNRGLILKMLFVLVIFXXXXFVF 109
            GP   QSQA +QQ  LA       Q R +A+  +EST+VEL++I  +++TMVA+QGEV  RI  ++D++  +V GAQ QLLKYL S+SSNR LILK+  VL+ F     VF
Sbjct:  243 GPESSQSQARLQQQQLAPVQDSYMQNRAEALQNVESTIVELSTIFTQLATMVAQQGEVAIRIDENMDESLSNVEGAQNQLLKYLDSISSNRWLILKIFMVLITFLLIFVVF 353          
BLAST of mRNA_M-pyrifera_M_contig117426.3599.1 vs. uniprot
Match: A0A3L6SKT8_PANMI (Syntaxin 32 n=2 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6SKT8_PANMI)

HSP 1 Score: 81.3 bits (199), Expect = 4.340e-16
Identity = 51/105 (48.57%), Postives = 75/105 (71.43%), Query Frame = 0
Query:    7 QQSQALVQQSSLAYNSQARLDAVHQIESTMVELNSIMMEVSTMVAEQGEVVERISRDIDDANEHVLGAQEQLLKYLSSVSSNRGLILKMLFVLVIFXXXXFVFFV 111
            QQ Q  VQQ S     Q+R +A+  +EST+ EL++I  +++TMV++QGE+  RI  ++DD   +V GAQ QLLKYL+S+SSNR L++K+ FVL++F    F+FFV
Sbjct:  197 QQQQLAVQQDSYM---QSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDTLANVEGAQGQLLKYLNSISSNRWLMMKIFFVLMVFLMI-FIFFV 297          
BLAST of mRNA_M-pyrifera_M_contig117426.3599.1 vs. uniprot
Match: A2ZPX7_ORYSJ (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A2ZPX7_ORYSJ)

HSP 1 Score: 80.5 bits (197), Expect = 1.040e-15
Identity = 50/102 (49.02%), Postives = 74/102 (72.55%), Query Frame = 0
Query:   10 QALVQQSSLAYNSQARLDAVHQIESTMVELNSIMMEVSTMVAEQGEVVERISRDIDDANEHVLGAQEQLLKYLSSVSSNRGLILKMLFVLVIFXXXXFVFFV 111
            Q LVQQ S     Q+R +A+  +EST+ EL++I  +++TMV++QGE+  RI  ++DD   +V GAQ QLLKYL+S+SSNR L++K+ FVL++F    F+FFV
Sbjct:  221 QQLVQQDSYM---QSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDTLANVEGAQGQLLKYLNSISSNRWLMMKIFFVLMVFLMI-FIFFV 318          
BLAST of mRNA_M-pyrifera_M_contig117426.3599.1 vs. uniprot
Match: A0A0D9UXI6_9ORYZ (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9UXI6_9ORYZ)

HSP 1 Score: 80.5 bits (197), Expect = 1.260e-15
Identity = 50/102 (49.02%), Postives = 74/102 (72.55%), Query Frame = 0
Query:   10 QALVQQSSLAYNSQARLDAVHQIESTMVELNSIMMEVSTMVAEQGEVVERISRDIDDANEHVLGAQEQLLKYLSSVSSNRGLILKMLFVLVIFXXXXFVFFV 111
            Q LVQQ S     Q+R +A+  +EST+ EL++I  +++TMV++QGE+  RI  ++DD   +V GAQ QLLKYL+S+SSNR L++K+ FVL++F    F+FFV
Sbjct:  243 QQLVQQDSYM---QSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDTLANVEGAQGQLLKYLNSISSNRWLMMKIFFVLMVFLMI-FIFFV 340          
BLAST of mRNA_M-pyrifera_M_contig117426.3599.1 vs. uniprot
Match: A0A0E0MS64_ORYRU (t-SNARE coiled-coil homology domain-containing protein n=14 Tax=Poaceae TaxID=4479 RepID=A0A0E0MS64_ORYRU)

HSP 1 Score: 80.5 bits (197), Expect = 1.290e-15
Identity = 50/102 (49.02%), Postives = 74/102 (72.55%), Query Frame = 0
Query:   10 QALVQQSSLAYNSQARLDAVHQIESTMVELNSIMMEVSTMVAEQGEVVERISRDIDDANEHVLGAQEQLLKYLSSVSSNRGLILKMLFVLVIFXXXXFVFFV 111
            Q LVQQ S     Q+R +A+  +EST+ EL++I  +++TMV++QGE+  RI  ++DD   +V GAQ QLLKYL+S+SSNR L++K+ FVL++F    F+FFV
Sbjct:  246 QQLVQQDSYM---QSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDTLANVEGAQGQLLKYLNSISSNRWLMMKIFFVLMVFLMI-FIFFV 343          
BLAST of mRNA_M-pyrifera_M_contig117426.3599.1 vs. uniprot
Match: A0A388K8E5_CHABU (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K8E5_CHABU)

HSP 1 Score: 80.5 bits (197), Expect = 1.630e-15
Identity = 44/86 (51.16%), Postives = 63/86 (73.26%), Query Frame = 0
Query:   24 ARLDAVHQIESTMVELNSIMMEVSTMVAEQGEVVERISRDIDDANEHVLGAQEQLLKYLSSVSSNRGLILKMLFVLVIFXXXXFVF 109
            +R +A+  +EST+VEL+SI  +++TMVAEQGE+  RI  +++D   +V GAQ  LLKYLS +SSNR L++K+ FVL+IF     VF
Sbjct:  293 SRAEALQNVESTIVELSSIFQQLATMVAEQGEMAVRIDENLEDTLANVEGAQGALLKYLSRISSNRWLVIKIFFVLIIFLLIFVVF 378          
BLAST of mRNA_M-pyrifera_M_contig117426.3599.1 vs. uniprot
Match: A0A2I0W377_9ASPA (Syntaxin-32 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0W377_9ASPA)

HSP 1 Score: 80.1 bits (196), Expect = 1.720e-15
Identity = 46/89 (51.69%), Postives = 68/89 (76.40%), Query Frame = 0
Query:   23 QARLDAVHQIESTMVELNSIMMEVSTMVAEQGEVVERISRDIDDANEHVLGAQEQLLKYLSSVSSNRGLILKMLFVLVIFXXXXFVFFV 111
            Q+R +A+  +EST+ EL++I  +++TMV++QGE+  RI  ++DD   +V GAQ QLLKYL+S+SSNR L+LK+ FVL++F    FVFFV
Sbjct:  251 QSRAEALQNVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDTLANVEGAQGQLLKYLNSISSNRWLMLKIFFVLIVFLMI-FVFFV 338          
BLAST of mRNA_M-pyrifera_M_contig117426.3599.1 vs. uniprot
Match: B9RPA3_RICCO (Syntaxin, putative n=6 Tax=Euphorbiaceae TaxID=3977 RepID=B9RPA3_RICCO)

HSP 1 Score: 80.1 bits (196), Expect = 1.820e-15
Identity = 43/89 (48.31%), Postives = 69/89 (77.53%), Query Frame = 0
Query:   23 QARLDAVHQIESTMVELNSIMMEVSTMVAEQGEVVERISRDIDDANEHVLGAQEQLLKYLSSVSSNRGLILKMLFVLVIFXXXXFVFFV 111
            Q+R +A+H +EST+ EL++I  +++TMV++QGE+  RI  ++DD   +V GAQ QL++YL+S+SSNR L++K+ FVL++F    F+FFV
Sbjct:  258 QSRAEALHNVESTIHELSNIFTQLATMVSQQGELAIRIDENMDDTLSNVEGAQNQLVRYLNSISSNRWLMIKIFFVLIVFLMI-FLFFV 345          
BLAST of mRNA_M-pyrifera_M_contig117426.3599.1 vs. uniprot
Match: A0A068U4Y1_COFCA (t-SNARE coiled-coil homology domain-containing protein n=4 Tax=Coffea TaxID=13442 RepID=A0A068U4Y1_COFCA)

HSP 1 Score: 80.1 bits (196), Expect = 1.830e-15
Identity = 44/89 (49.44%), Postives = 70/89 (78.65%), Query Frame = 0
Query:   23 QARLDAVHQIESTMVELNSIMMEVSTMVAEQGEVVERISRDIDDANEHVLGAQEQLLKYLSSVSSNRGLILKMLFVLVIFXXXXFVFFV 111
            Q+R +A+H +EST+ EL++I  +++TMV++QGE+  RI  +++DA  +V GAQ QL++YL+S+SSNR L++K+ FVLV+F    F+FFV
Sbjct:  259 QSRAEALHNVESTIHELSNIFSQLATMVSQQGEIAIRIDENMEDALANVEGAQGQLVRYLNSISSNRWLMIKIFFVLVVFLMI-FLFFV 346          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117426.3599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4M827_9EUKA7.290e-1855.95Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A9SZH2_PHYPA2.050e-1749.55Qa-SNARE, SYP3/Sed5p/Syntaxin 5-type n=2 Tax=Physc... [more]
A0A3L6SKT8_PANMI4.340e-1648.57Syntaxin 32 n=2 Tax=Panicum miliaceum TaxID=4540 R... [more]
A2ZPX7_ORYSJ1.040e-1549.02t-SNARE coiled-coil homology domain-containing pro... [more]
A0A0D9UXI6_9ORYZ1.260e-1549.02t-SNARE coiled-coil homology domain-containing pro... [more]
A0A0E0MS64_ORYRU1.290e-1549.02t-SNARE coiled-coil homology domain-containing pro... [more]
A0A388K8E5_CHABU1.630e-1551.16t-SNARE coiled-coil homology domain-containing pro... [more]
A0A2I0W377_9ASPA1.720e-1551.69Syntaxin-32 n=1 Tax=Dendrobium catenatum TaxID=906... [more]
B9RPA3_RICCO1.820e-1548.31Syntaxin, putative n=6 Tax=Euphorbiaceae TaxID=397... [more]
A0A068U4Y1_COFCA1.830e-1549.44t-SNARE coiled-coil homology domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..77
NoneNo IPR availableGENE3D1.20.5.110coord: 8..111
e-value: 4.3E-17
score: 63.6
NoneNo IPR availablePANTHERPTHR19957:SF3SYNTAXIN-5coord: 14..110
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 14..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..110
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 20..81
NoneNo IPR availableTMHMMTMhelixcoord: 90..109
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 14..81
e-value: 3.9E-8
score: 43.0
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 55..106
e-value: 5.5E-11
score: 42.3
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 19..81
score: 15.604
IPR006012Syntaxin/epimorphin, conserved sitePROSITEPS00914SYNTAXINcoord: 25..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117426contigM-pyrifera_M_contig117426:83..418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117426.3599.1mRNA_M-pyrifera_M_contig117426.3599.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117426 74..418 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117426.3599.1 ID=prot_M-pyrifera_M_contig117426.3599.1|Name=mRNA_M-pyrifera_M_contig117426.3599.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
MGGPGGQQSQALVQQSSLAYNSQARLDAVHQIESTMVELNSIMMEVSTMV
AEQGEVVERISRDIDDANEHVLGAQEQLLKYLSSVSSNRGLILKMLFVLV
IFVIIFFVFFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR006012Syntaxin/epimorphin_CS