prot_M-pyrifera_M_contig117292.3578.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig117292.3578.1
Unique Name	prot_M-pyrifera_M_contig117292.3578.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	185

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig117292.3578.1 vs. uniprot
Match: A0A2E7KEV0_9PLAN (Uncharacterized protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KEV0_9PLAN)

HSP 1 Score: 341 bits (874), Expect = 1.550e-116
Identity = 181/185 (97.84%), Postives = 184/185 (99.46%), Query Frame = 0

Query:    1 SRQRSYSASDFAMFKLTTKERNQEYRDMLAEKLKQTRDNLSRDLSRELDLNVAFQISNTVALEPHYESINELSSSKYVSYGVQIEGADEVQDANVNTLTFLNVKRKLIALGAIAPYKDLEWTRTTSRAWAKAILSQNPEPSPFPDRLPDNSRENLIPIATLVTLAMMAVLAIIVKRRRKQVASSE 185
            SRQRSYSASDFAMFKLTTKERNQEYRDMLAEKLKQTRDNLSRDLSRELDLNVAFQISNTVALEPHYESINELSSSKYVSYGVQ+EGADEVQDANVNTLTFLNVKRKLIALGAIAPYKDLEWTRTTSRAWAKAIL+QNPEPSPFPDRLPD+S ENLIPIATLVTLAMMAVLAIIVKRRRKQVASSE
Sbjct:   98 SRQRSYSASDFAMFKLTTKERNQEYRDMLAEKLKQTRDNLSRDLSRELDLNVAFQISNTVALEPHYESINELSSSKYVSYGVQVEGADEVQDANVNTLTFLNVKRKLIALGAIAPYKDLEWTRTTSRAWAKAILAQNPEPSPFPDRLPDHSHENLIPIATLVTLAMMAVLAIIVKRRRKQVASSE 282

[Close]

BLAST of mRNA_M-pyrifera_M_contig117292.3578.1 vs. uniprot
Match: A0A517WMX4_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517WMX4_9PLAN)

HSP 1 Score: 83.2 bits (204), Expect = 7.310e-16
Identity = 65/182 (35.71%), Postives = 97/182 (53.30%), Query Frame = 0

Query:   10 DFAMFKLTTKERNQEYRDMLAE-KLKQTR--DNLSRDLSRELDLNVAFQISNTVALEPHYESINELSSSKYVS-YGVQIEGADE----VQDANVNTLTFLNVKRKLIALGAIAPYKDLEWTRTTSRAWAKAILSQNPEP---SPFPDRLPDNSRENLIPIA--TLVTLAMMAVLAIIVKRRR 178
            +F   K  TK   +EYR ++ E K K  +  + L+  +  + DL  A ++S  V  EPH+ES + L+ S +++ Y    EGA E    V++ +  T T +NV+ KL+ L   AP  DLEWTRT SR W KAI++ N +P   S +P        +    IA   L+  A++  LAI VK+ R
Sbjct:  106 NFLELKKATK---REYRQIIQEIKAKDPKIYERLNTGIQEQFDLATAIEVSQLVPFEPHFESSHALAVSMFLTIYLPPEEGAAEEAEPVEEISAATATVMNVEGKLLFLFCYAPQDDLEWTRTASRDWTKAIIAANDKPPVASSYPSNFDPLKSDQGDKIAKWVLIIAAVLVALAIFVKKNR 284

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig117292.3578.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig117292.3578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2E7KEV0_9PLAN	1.550e-116	97.84	Uncharacterized protein n=4 Tax=Gimesia TaxID=1649...	[more]
A0A517WMX4_9PLAN	7.310e-16	35.71	Uncharacterized protein n=5 Tax=Gimesia TaxID=1649...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 30..50
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 175..185
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..154
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 155..174
None	No IPR available	TMHMM	TMhelix		coord: 155..174

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig117292	contig	M-pyrifera_M_contig117292:1..555 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig117292.3578.1	mRNA_M-pyrifera_M_contig117292.3578.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig117292 1..555 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig117292.3578.1 ID=prot_M-pyrifera_M_contig117292.3578.1|Name=mRNA_M-pyrifera_M_contig117292.3578.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=185bp
SRQRSYSASDFAMFKLTTKERNQEYRDMLAEKLKQTRDNLSRDLSRELDL
NVAFQISNTVALEPHYESINELSSSKYVSYGVQIEGADEVQDANVNTLTF
LNVKRKLIALGAIAPYKDLEWTRTTSRAWAKAILSQNPEPSPFPDRLPDN
SRENLIPIATLVTLAMMAVLAIIVKRRRKQVASSE