prot_M-pyrifera_M_contig117277.3573.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117277.3573.1
Unique Nameprot_M-pyrifera_M_contig117277.3573.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length124
Homology
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BLAST of mRNA_M-pyrifera_M_contig117277.3573.1 vs. uniprot
Match: UPI0009FC3BC5 (tetratricopeptide repeat protein n=1 Tax=Desulfobulbus elongatus TaxID=53332 RepID=UPI0009FC3BC5)

HSP 1 Score: 56.2 bits (134), Expect = 1.140e-6
Identity = 25/73 (34.25%), Postives = 43/73 (58.90%), Query Frame = 0 
Query:   27 YDKGVQLNQRGILVEASVMLTEALAIDPEYAEAYYQRGLSFLGMGRNQHAIKDFTAAAGHGIRQLDPYLRLIK 99
            Y+KG +L   G  V++++ LT AL +DP +A+A+Y RGL  +     Q A ++F +A       +D ++ L+K
Sbjct:   35 YEKGKRLYDHGDYVKSNIELTNALQLDPNFADAFYMRGLVEIKRNNPQKAFENFNSAIAKNQNHIDAHIELVK 107
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BLAST of mRNA_M-pyrifera_M_contig117277.3573.1 vs. uniprot
Match: A0A6J4XA85_9DELT (Uncharacterized protein n=1 Tax=Olavius sp. associated proteobacterium Delta 1 TaxID=698986 RepID=A0A6J4XA85_9DELT)

HSP 1 Score: 52.8 bits (125), Expect = 1.620e-6
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 0 
Query:   23 AKRHYDKGVQLNQRGILVEASVMLTEALAIDPEYAEAYYQRGLSFLGMGRNQHAIKDFTAAAGHGIR 89
            AK  Y++G +L Q G   EA   L++A+A +P YAEAY+ RG  +  +GR   A  D  AAA  G R
Sbjct:   11 AKHWYERGQRLKQDGRHREAIKALSQAIAKNPAYAEAYFARGACYYALGRYDQAGDDIDAAAILGCR 77
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BLAST of mRNA_M-pyrifera_M_contig117277.3573.1 vs. uniprot
Match: UPI000932DF4E (tetratricopeptide repeat protein n=1 Tax=Spirulina major TaxID=270636 RepID=UPI000932DF4E)

HSP 1 Score: 52.8 bits (125), Expect = 1.250e-5
Identity = 25/60 (41.67%), Postives = 39/60 (65.00%), Query Frame = 0 
Query:   21 PEAKRHYDKGVQLNQRGILVEASVMLTEALAIDPEYAEAYYQRGLSFLGMGRNQHAIKDF 80
            PEAK  +++GV   Q G L+ A  + ++A+ IDP +A AYY RGL++  + R + AI D+
Sbjct:  134 PEAKELFNQGVDRYQAGDLMGAIDLWSQAIEIDPNFAYAYYNRGLAYSNLKRYEEAITDY 193
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BLAST of mRNA_M-pyrifera_M_contig117277.3573.1 vs. uniprot
Match: UPI0016831B1C (tetratricopeptide repeat protein n=1 Tax=Calothrix sp. FACHB-156 TaxID=2692779 RepID=UPI0016831B1C)

HSP 1 Score: 52.8 bits (125), Expect = 1.400e-5
Identity = 33/95 (34.74%), Postives = 46/95 (48.42%), Query Frame = 0 
Query:   22 EAKRHYDKGVQLNQRGILVEASVMLTEALAIDPEYAEAYYQRGLSFLGMGRNQHAIKDFTAAAGHGIRQLDPYLRLIKWHTDRR-QYAAGLIVTD 115
            +AK  +DKG+     G   EA    TEA+ I+P YAEAYY+RGL +     NQ    D T     G  ++D Y  +       + Q + G  +TD
Sbjct:   29 KAKDWFDKGIMKVNEGKYEEALAAFTEAIKIEPRYAEAYYRRGLIYAKYPENQPLNADGTVK---GCERIDAYRIICPVSVQNKVQESKGKAITD 120
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BLAST of mRNA_M-pyrifera_M_contig117277.3573.1 vs. uniprot
Match: A0A7J4GK94_9ARCH (Tetratricopeptide repeat protein n=1 Tax=Candidatus Poseidoniales archaeon TaxID=2163009 RepID=A0A7J4GK94_9ARCH)

HSP 1 Score: 51.6 bits (122), Expect = 4.670e-5
Identity = 29/95 (30.53%), Postives = 46/95 (48.42%), Query Frame = 0 
Query:   30 GVQLNQRGILVEASVMLTEALAIDPEYAEAYYQRGLSFLGMGRNQHAIKDFTAAAGHGIRQLDPYLRLIKWHTDRRQYAAGLIVTDQLAANMPEN 124
            G  L  +  L EA   L EA+ +D +  E +YQRGL +L  G+   A+ DF  AA  G   ++  LR+   H ++  + A      ++    P+N
Sbjct:  649 GATLIAQDRLTEAEQPLNEAIHLDGDIPEGWYQRGLLYLEFGQADSALSDFETAAVRGHPHMNALLRIAAIHHEKEDWEAAEAAWRKVLDAEPDN 743
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BLAST of mRNA_M-pyrifera_M_contig117277.3573.1 vs. uniprot
Match: UPI0002F61A89 (tetratricopeptide repeat protein n=1 Tax=Calothrix sp. PCC 7103 TaxID=32057 RepID=UPI0002F61A89)

HSP 1 Score: 50.8 bits (120), Expect = 6.900e-5
Identity = 33/95 (34.74%), Postives = 47/95 (49.47%), Query Frame = 0 
Query:   22 EAKRHYDKGVQLNQRGILVEASVMLTEALAIDPEYAEAYYQRGLSFLGMGRNQHAIKDFTAAAGHGIRQLDPYLRLIKWHTDRR-QYAAGLIVTD 115
            +AK  +DKG+     G   EA    TEA+ I+P YAEAYY+RGL +     NQ    D T     G +++D Y  +       + Q + G  +TD
Sbjct:   39 KAKDWFDKGIIKVNEGNYQEALADFTEAINIEPRYAEAYYRRGLIYAKYPENQPLNADGTVK---GCQRIDAYRIICPVSVQNKVQESKGKAITD 130
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BLAST of mRNA_M-pyrifera_M_contig117277.3573.1 vs. uniprot
Match: A0A1Q8ZEX0_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbya sp. 'hensonii' TaxID=1922337 RepID=A0A1Q8ZEX0_9CYAN)

HSP 1 Score: 50.4 bits (119), Expect = 9.180e-5
Identity = 24/61 (39.34%), Postives = 34/61 (55.74%), Query Frame = 0 
Query:   23 AKRHYDKGVQLNQRGILVEASVMLTEALAIDPEYAEAYYQRGLSFLGMGRNQHAIKDFTAA 83
            A+ H+ +  QL Q G    A    T+A+ + P+YAEAY+ RG SF   G    A+ D+T A
Sbjct:   24 ARDHFQQAQQLEQSGNWSGAIASYTQAIRLQPDYAEAYHNRGRSFADFGYYAEALNDYTEA 84
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117277.3573.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
UPI0009FC3BC51.140e-634.25tetratricopeptide repeat protein n=1 Tax=Desulfobu... [more]
A0A6J4XA85_9DELT1.620e-643.28Uncharacterized protein n=1 Tax=Olavius sp. associ... [more]
UPI000932DF4E1.250e-541.67tetratricopeptide repeat protein n=1 Tax=Spirulina... [more]
UPI0016831B1C1.400e-534.74tetratricopeptide repeat protein n=1 Tax=Calothrix... [more]
A0A7J4GK94_9ARCH4.670e-530.53Tetratricopeptide repeat protein n=1 Tax=Candidatu... [more]
UPI0002F61A896.900e-534.74tetratricopeptide repeat protein n=1 Tax=Calothrix... [more]
A0A1Q8ZEX0_9CYAN9.180e-539.34Uncharacterized protein n=1 Tax=Leptolyngbya sp. '... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 57..90
e-value: 9.6
score: 15.1
coord: 23..56
e-value: 8.7
score: 15.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 13..116
e-value: 2.4E-12
score: 49.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 23..84
NoneNo IPR availablePFAMPF13414TPR_11coord: 35..71
e-value: 2.2E-6
score: 27.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..124
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.634
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 23..90
score: 11.349

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117277contigM-pyrifera_M_contig117277:175..546 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117277.3573.1mRNA_M-pyrifera_M_contig117277.3573.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117277 151..546 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117277.3573.1 ID=prot_M-pyrifera_M_contig117277.3573.1|Name=mRNA_M-pyrifera_M_contig117277.3573.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp
MLVHAAFAGSLACTIAWAQLPEAKRHYDKGVQLNQRGILVEASVMLTEAL
AIDPEYAEAYYQRGLSFLGMGRNQHAIKDFTAAAGHGIRQLDPYLRLIKW
HTDRRQYAAGLIVTDQLAANMPEN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom