prot_M-pyrifera_M_contig117267.3571.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117267.3571.1
Unique Nameprot_M-pyrifera_M_contig117267.3571.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length77
Homology
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BLAST of mRNA_M-pyrifera_M_contig117267.3571.1 vs. uniprot
Match: A0A7S3XMB2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMB2_HETAK)

HSP 1 Score: 56.2 bits (134), Expect = 1.390e-7
Identity = 26/61 (42.62%), Postives = 44/61 (72.13%), Query Frame = 0 
Query:    3 TGETTYDRPDASKSQAERDIPPCAWKEYKTKEGKTYYANASTGKSAWTEPEELTAYKKKVA 63
            T ++TY++P+A KS  E+ +PPC WKEY+   G+ YY++ +  +S W EP+EL  +K+++A
Sbjct:  146 TKKSTYEKPEALKSDKEKALPPCKWKEYEAN-GRKYYSDGT--ESLWEEPDELKLHKRRLA 203
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BLAST of mRNA_M-pyrifera_M_contig117267.3571.1 vs. uniprot
Match: A0A7S3XNG3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNG3_HETAK)

HSP 1 Score: 56.2 bits (134), Expect = 2.080e-7
Identity = 26/61 (42.62%), Postives = 44/61 (72.13%), Query Frame = 0 
Query:    3 TGETTYDRPDASKSQAERDIPPCAWKEYKTKEGKTYYANASTGKSAWTEPEELTAYKKKVA 63
            T ++TY++P+A KS  E+ +PPC WKEY+   G+ YY++ +  +S W EP+EL  +K+++A
Sbjct:  428 TKKSTYEKPEALKSDKEKALPPCKWKEYEAN-GRKYYSDGT--ESLWEEPDELKLHKRRLA 485
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BLAST of mRNA_M-pyrifera_M_contig117267.3571.1 vs. uniprot
Match: UPI000711FF3B (pre-mRNA-processing factor 40-like a n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711FF3B)

HSP 1 Score: 54.3 bits (129), Expect = 1.010e-6
Identity = 29/77 (37.66%), Postives = 40/77 (51.95%), Query Frame = 0 
Query:    1 QSTGETTYDRPDASKSQAERDIPPCAWKEYKTKEGKTYYANASTGKSAWTEPEELTAYKKKVAXXXXXXGQQPAPAS 77
            Q T   TY +PD  K+ AE+ I  C WKE  T +G  ++ N  T  S W EP+E T YK+++          PA +S
Sbjct:  175 QRTRAVTYQKPDELKTDAEKAIKTCPWKESYTADGHPFWTNLITQVSVWEEPQEYTLYKQELTRIQNSTPSTPATSS 251
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117267.3571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7S3XMB2_HETAK1.390e-742.62Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XNG3_HETAK2.080e-742.62Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI000711FF3B1.010e-637.66pre-mRNA-processing factor 40-like a n=1 Tax=Blast... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 22..54
e-value: 3.1E-6
score: 36.7
IPR001202WW domainPFAMPF00397WWcoord: 24..52
e-value: 6.6E-8
score: 32.5
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 24..54
score: 12.492
NoneNo IPR availableGENE3D2.20.70.10coord: 12..75
e-value: 9.0E-14
score: 52.7
IPR039726Pre-mRNA-processing factor Prp40PANTHERPTHR11864PRE-MRNA-PROCESSING PROTEIN PRP40coord: 2..72
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 18..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117267contigM-pyrifera_M_contig117267:72..302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117267.3571.1mRNA_M-pyrifera_M_contig117267.3571.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117267 72..302 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117267.3571.1 ID=prot_M-pyrifera_M_contig117267.3571.1|Name=mRNA_M-pyrifera_M_contig117267.3571.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
QSTGETTYDRPDASKSQAERDIPPCAWKEYKTKEGKTYYANASTGKSAWT
EPEELTAYKKKVAAAAAAAGQQPAPAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR039726Prp40-like
IPR036020WW_dom_sf