prot_M-pyrifera_M_contig117120.3539.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117120.3539.1
Unique Nameprot_M-pyrifera_M_contig117120.3539.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length182
Homology
BLAST of mRNA_M-pyrifera_M_contig117120.3539.1 vs. uniprot
Match: A0A7X6APA5_9ACTN (Elongation factor Ts n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6APA5_9ACTN)

HSP 1 Score: 284 bits (727), Expect = 1.260e-94
Identity = 148/182 (81.32%), Postives = 167/182 (91.76%), Query Frame = 0
Query:    1 MSISAKDVKALRDATGAGMMDAKKALTECNGDMVAATQLLREKGLAKAADRGDRENNEGTIALAADGNTAALVQIKTETDFSAKNEAVTGLAQTLADAVLADGPGAIDAAATSIEDLQVTIKENIAVGAVERIEAADGNIVDTYLHVQDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPSY 182
            MSISA+DVKALRDATGAGMMDAKKALTE +GDM AATQLLREKGL KAA+R  R+N+EG+IAL ADGN AALVQIKTETDFSAKNEAVTGLA TLA+AVLADGPG +D    +++DL+VTIKENI +GAVERIEAA+GNI+DTYLH QDGRGVNAVVVEGSGVS++DLHQVALHIAFA+P+Y
Sbjct:    1 MSISAQDVKALRDATGAGMMDAKKALTETDGDMEAATQLLREKGLTKAAERAGRDNDEGSIALVADGNVAALVQIKTETDFSAKNEAVTGLASTLAEAVLADGPGVVDEHGAALDDLKVTIKENIELGAVERIEAAEGNILDTYLHTQDGRGVNAVVVEGSGVSREDLHQVALHIAFARPTY 182          
BLAST of mRNA_M-pyrifera_M_contig117120.3539.1 vs. uniprot
Match: A0A2D8GGF3_9ACTN (Elongation factor Ts n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8GGF3_9ACTN)

HSP 1 Score: 273 bits (698), Expect = 6.660e-90
Identity = 144/182 (79.12%), Postives = 162/182 (89.01%), Query Frame = 0
Query:    1 MSISAKDVKALRDATGAGMMDAKKALTECNGDMVAATQLLREKGLAKAADRGDRENNEGTIALAADGNTAALVQIKTETDFSAKNEAVTGLAQTLADAVLADGPGAIDAAATSIEDLQVTIKENIAVGAVERIEAADGNIVDTYLHVQDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPSY 182
            MS +AKDVKALRDATGAGMMDAKKAL   +GDM AA Q LREKGLAKA  R DR+N+EGT+A+A DGNTAA+VQIKTETDFSAKN AVT LAQTLADAVL  GPGA+DA A +I+DL+VTIKENI +GAVE+I AADGNI+DTYLH QDGRGVNAVVVEG+GVSQ+DLHQVALH+AFAKP+Y
Sbjct:   23 MSFTAKDVKALRDATGAGMMDAKKALEAADGDMEAAKQALREKGLAKADARSDRDNDEGTVAIAVDGNTAAVVQIKTETDFSAKNNAVTTLAQTLADAVLTGGPGAVDAHADAIDDLKVTIKENIELGAVEQIIAADGNILDTYLHSQDGRGVNAVVVEGNGVSQEDLHQVALHVAFAKPTY 204          
BLAST of mRNA_M-pyrifera_M_contig117120.3539.1 vs. uniprot
Match: A0A7K1ZH16_9ACTN (Elongation factor Ts n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZH16_9ACTN)

HSP 1 Score: 267 bits (683), Expect = 2.050e-87
Identity = 142/182 (78.02%), Postives = 158/182 (86.81%), Query Frame = 0
Query:    1 MSISAKDVKALRDATGAGMMDAKKALTECNGDMVAATQLLREKGLAKAADRGDRENNEGTIALAADGNTAALVQIKTETDFSAKNEAVTGLAQTLADAVLADGPGAIDAAATSIEDLQVTIKENIAVGAVERIEAADGNIVDTYLHVQDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPSY 182
            MSISAKDVKALRDATGAGMMDAKK+L EC+GDM AATQLLREKGLAKAA R DR+N+EGTIALAA  N AA+VQIKTETDFSAK++AVT LA  +AD VL  GPGA +  + +IEDL+V IKEN+ +G VERIE A GN +DTYLH QDGRGVNAVVVEGSGVS+DDLHQVALHIAFAKPSY
Sbjct:   38 MSISAKDVKALRDATGAGMMDAKKSLVECDGDMDAATQLLREKGLAKAAARSDRDNDEGTIALAAADNVAAIVQIKTETDFSAKSDAVTSLASAIADDVLMRGPGAANEHSAAIEDLRVKIKENVELGTVERIEGAQGNTIDTYLHSQDGRGVNAVVVEGSGVSRDDLHQVALHIAFAKPSY 219          
BLAST of mRNA_M-pyrifera_M_contig117120.3539.1 vs. uniprot
Match: A0A7Y2DGN1_9ACTN (Elongation factor Ts n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DGN1_9ACTN)

HSP 1 Score: 244 bits (624), Expect = 5.800e-79
Identity = 129/177 (72.88%), Postives = 145/177 (81.92%), Query Frame = 0
Query:    5 AKDVKALRDATGAGMMDAKKALTECNGDMVAATQLLREKGLAKAADRGDRENNEGTIALAADGNTAALVQIKTETDFSAKNEAVTGLAQTLADAVLADGPGAIDAAATSIEDLQVTIKENIAVGAVERIEAADGNIVDTYLHVQDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPS 181
            AKDVKALRDATGAGMMDAKKALTE +GDM AATQLLREKG+AKAA R DREN EG +A+A      ALV +K ETDFSAK++      Q LADAVLADG GA DA    +EDL++ +KENI +G +E+I AADGN++DTYLH QDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPS
Sbjct:    6 AKDVKALRDATGAGMMDAKKALTETDGDMEAATQLLREKGMAKAAGRTDRENAEGAVAVAQGDGVVALVHVKCETDFSAKSDGFLAFTQKLADAVLADGAGAADALTAELEDLKLVLKENIELGRIEQIRAADGNLLDTYLHSQDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPS 182          
BLAST of mRNA_M-pyrifera_M_contig117120.3539.1 vs. uniprot
Match: A0A6B0WKP7_9ACTN (Elongation factor Ts (Fragment) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WKP7_9ACTN)

HSP 1 Score: 242 bits (617), Expect = 1.790e-77
Identity = 125/182 (68.68%), Postives = 147/182 (80.77%), Query Frame = 0
Query:    1 MSISAKDVKALRDATGAGMMDAKKALTECNGDMVAATQLLREKGLAKAADRGDRENNEGTIALAADGNTAALVQIKTETDFSAKNEAVTGLAQTLADAVLADGPGAIDAAATSIEDLQVTIKENIAVGAVERIEAADGNIVDTYLHVQDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPSY 182
            M++SAKDVKALRD TGAGMMDAKKALT  +GDM AA Q+LRE+GLAKA  R  R+N++G IA+A DG  AA+VQ+K ETDFSAKN   T L Q LADAVL+ GPGA+D  A  IEDL++ +KENI VG VE I AADGN++D+YLH QDGRGVNAVVVEGSGV  + LHQVALH+AFAKP +
Sbjct:   57 MAVSAKDVKALRDVTGAGMMDAKKALTSADGDMEAARQILREQGLAKADARSGRDNDQGAIAVAGDGKAAAVVQLKCETDFSAKNAGFTSLVQALADAVLSGGPGAVDTHAAGIEDLKLVLKENIEVGVVEHIRAADGNVLDSYLHRQDGRGVNAVVVEGSGVGAEALHQVALHVAFAKPQF 238          
BLAST of mRNA_M-pyrifera_M_contig117120.3539.1 vs. uniprot
Match: A0A6B0ZHL5_9ACTN (Elongation factor Ts n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZHL5_9ACTN)

HSP 1 Score: 241 bits (614), Expect = 5.250e-77
Identity = 125/182 (68.68%), Postives = 147/182 (80.77%), Query Frame = 0
Query:    1 MSISAKDVKALRDATGAGMMDAKKALTECNGDMVAATQLLREKGLAKAADRGDRENNEGTIALAADGNTAALVQIKTETDFSAKNEAVTGLAQTLADAVLADGPGAIDAAATSIEDLQVTIKENIAVGAVERIEAADGNIVDTYLHVQDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPSY 182
            M++SAKDVKALRD TGAGMMDAKKALT   GDM AA Q+LRE+GLAKA  R  R+N++G IA+A DG  AA+VQ+K ETDFSAKNE  T L QTLA +VLA GPGA+D  A  IEDL++ +KENI VG VE ++AADGN +D+Y+H QDGRGVNAVVVEGSGV  D LHQVALH+AFAKP +
Sbjct:   34 MAVSAKDVKALRDFTGAGMMDAKKALTSAGGDMEAARQILREQGLAKADARSGRDNDQGAIAVAGDGRVAAVVQLKCETDFSAKNEGFTSLVQTLAGSVLAGGPGAVDQHAAEIEDLKLVLKENIDVGVVEHLQAADGNFLDSYVHRQDGRGVNAVVVEGSGVDADALHQVALHVAFAKPQF 215          
BLAST of mRNA_M-pyrifera_M_contig117120.3539.1 vs. uniprot
Match: A0A2E5NTM0_9ACTN (Elongation factor Ts n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5NTM0_9ACTN)

HSP 1 Score: 237 bits (604), Expect = 6.280e-76
Identity = 125/179 (69.83%), Postives = 146/179 (81.56%), Query Frame = 0
Query:    3 ISAKDVKALRDATGAGMMDAKKALTECNGDMVAATQLLREKGLAKAADRGDRENNEGTIALAADGNTAALVQIKTETDFSAKNEAVTGLAQTLADAVLADGPGAIDAAATSIEDLQVTIKENIAVGAVERIEAADGNIVDTYLHVQDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPS 181
            I+AKDVKALRDATGAGMMDAKKALTEC GD  AA+Q+LREKGLAKAA R +R+N EG + LA DG  AALV +K ETDFSAK+E    L   L  AVLA+G GAI+  ++SI+DL++TIKENI VG V  +EAA+GN++DTYLHVQDGRGVN VVVEGS V Q+ LHQVALHIAFAKP+
Sbjct:    4 ITAKDVKALRDATGAGMMDAKKALTECEGDFEAASQVLREKGLAKAATRSERDNVEGAVGLAVDGCRAALVHLKCETDFSAKSEGFLALVDELTAAVLAEGEGAIETRSSSIDDLRITIKENIEVGTVTLLEAAEGNVLDTYLHVQDGRGVNGVVVEGSDVDQEALHQVALHIAFAKPT 182          
BLAST of mRNA_M-pyrifera_M_contig117120.3539.1 vs. uniprot
Match: A0A3D5K291_9ACTN (Elongation factor Ts n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3D5K291_9ACTN)

HSP 1 Score: 236 bits (601), Expect = 1.790e-75
Identity = 124/179 (69.27%), Postives = 145/179 (81.01%), Query Frame = 0
Query:    3 ISAKDVKALRDATGAGMMDAKKALTECNGDMVAATQLLREKGLAKAADRGDRENNEGTIALAADGNTAALVQIKTETDFSAKNEAVTGLAQTLADAVLADGPGAIDAAATSIEDLQVTIKENIAVGAVERIEAADGNIVDTYLHVQDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPS 181
            I+AKDVKALRDATGAGMMDAKKAL E +GD  AA Q+LREKGLAKAA R DR+N EG I L ADG  AALV +K ETDFSAK++    L   L +AVL +G GA+DA +++I+DL+++IKENI VG V  IEA DGN++DTYLHVQDGRGVN VVVEGSGV Q+ LHQVALHIAFAKP+
Sbjct:    4 IAAKDVKALRDATGAGMMDAKKALIESDGDFEAAAQMLREKGLAKAATRSDRDNVEGAIGLVADGQRAALVHLKCETDFSAKSDGFLSLVDELTNAVLTEGEGAVDARSSAIDDLRLSIKENIEVGQVSLIEAGDGNMIDTYLHVQDGRGVNGVVVEGSGVDQETLHQVALHIAFAKPT 182          
BLAST of mRNA_M-pyrifera_M_contig117120.3539.1 vs. uniprot
Match: A0A2E5P2W9_9ACTN (Elongation factor Ts n=2 Tax=root TaxID=1 RepID=A0A2E5P2W9_9ACTN)

HSP 1 Score: 235 bits (600), Expect = 2.540e-75
Identity = 123/181 (67.96%), Postives = 148/181 (81.77%), Query Frame = 0
Query:    1 MSISAKDVKALRDATGAGMMDAKKALTECNGDMVAATQLLREKGLAKAADRGDRENNEGTIALAADGNTAALVQIKTETDFSAKNEAVTGLAQTLADAVLADGPGAIDAAATSIEDLQVTIKENIAVGAVERIEAADGNIVDTYLHVQDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPS 181
            + I+AKDVKALRDATGAGMMDAK+AL EC+GD  AA+Q LREKGLA AA R DREN EG +AL +DG  AALV +K ETDFSAK++    L   L +AVLA+G  A++A +T+I+DL++TIKEN+ VG V  IEAA+GN++DTYLHVQDGRGVN VVVEGSGV Q+ LHQVALHIAFAKP+
Sbjct:    2 VDIAAKDVKALRDATGAGMMDAKRALIECDGDFEAASQTLREKGLANAATRSDRENIEGAVALVSDGRRAALVHLKCETDFSAKSDGFLFLVDELVNAVLAEGEAAVEAHSTAIDDLRLTIKENVEVGRVSLIEAAEGNMLDTYLHVQDGRGVNGVVVEGSGVDQETLHQVALHIAFAKPT 182          
BLAST of mRNA_M-pyrifera_M_contig117120.3539.1 vs. uniprot
Match: A0A6B1E8I7_9ACTN (Elongation factor Ts n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E8I7_9ACTN)

HSP 1 Score: 236 bits (602), Expect = 3.150e-75
Identity = 124/182 (68.13%), Postives = 149/182 (81.87%), Query Frame = 0
Query:    1 MSISAKDVKALRDATGAGMMDAKKALTECNGDMVAATQLLREKGLAKAADRGDRENNEGTIALAADGNTAALVQIKTETDFSAKNEAVTGLAQTLADAVLADGPGAIDAAATSIEDLQVTIKENIAVGAVERIEAADGNIVDTYLHVQDGRGVNAVVVEGSGVSQDDLHQVALHIAFAKPSY 182
            M++SA+DVKALRDATGAGMMDAKKALT  +GDM AA Q+LRE+GLAKA  R  REN++G IA+A +G +AA+VQ+K ETDFSAKNE  T L Q LA++VL  G GA+D  +  IEDL++ +KENI VG  ER+EAADGNI+D+YLH QDGRGVNAVVVEGSGV  + LHQVALHIAFAKP +
Sbjct:   31 MAVSARDVKALRDATGAGMMDAKKALTAADGDMEAARQILREQGLAKADARTGRENDQGAIAIATNGASAAVVQLKCETDFSAKNERFTSLVQALAESVLDAGAGAVDRHSDEIEDLKLVLKENIQVGVAERLEAADGNILDSYLHRQDGRGVNAVVVEGSGVGAESLHQVALHIAFAKPQF 212          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117120.3539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X6APA5_9ACTN1.260e-9481.32Elongation factor Ts n=1 Tax=Actinomycetia bacteri... [more]
A0A2D8GGF3_9ACTN6.660e-9079.12Elongation factor Ts n=6 Tax=Acidimicrobiaceae bac... [more]
A0A7K1ZH16_9ACTN2.050e-8778.02Elongation factor Ts n=2 Tax=Acidimicrobiaceae bac... [more]
A0A7Y2DGN1_9ACTN5.800e-7972.88Elongation factor Ts n=1 Tax=Acidimicrobiales bact... [more]
A0A6B0WKP7_9ACTN1.790e-7768.68Elongation factor Ts (Fragment) n=2 Tax=Acidimicro... [more]
A0A6B0ZHL5_9ACTN5.250e-7768.68Elongation factor Ts n=6 Tax=Acidimicrobiaceae bac... [more]
A0A2E5NTM0_9ACTN6.280e-7669.83Elongation factor Ts n=4 Tax=Acidimicrobiaceae bac... [more]
A0A3D5K291_9ACTN1.790e-7569.27Elongation factor Ts n=1 Tax=Acidimicrobiaceae bac... [more]
A0A2E5P2W9_9ACTN2.540e-7567.96Elongation factor Ts n=2 Tax=root TaxID=1 RepID=A0... [more]
A0A6B1E8I7_9ACTN3.150e-7568.13Elongation factor Ts n=1 Tax=Acidimicrobiaceae bac... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001816Translation elongation factor EFTs/EF1BTIGRFAMTIGR00116TIGR00116coord: 1..182
e-value: 1.4E-40
score: 137.3
IPR001816Translation elongation factor EFTs/EF1BPANTHERPTHR11741ELONGATION FACTOR TScoord: 2..181
IPR001816Translation elongation factor EFTs/EF1BHAMAPMF_00050EF_Tscoord: 1..182
score: 34.385
NoneNo IPR availableGENE3D1.10.8.10coord: 1..54
e-value: 3.9E-21
score: 76.6
NoneNo IPR availablePANTHERPTHR11741:SF0ELONGATION FACTOR TS, MITOCHONDRIALcoord: 2..181
IPR036402Elongation factor Ts, dimerisation domain superfamilyGENE3D3.30.479.20coord: 56..136
e-value: 7.3E-13
score: 50.5
IPR036402Elongation factor Ts, dimerisation domain superfamilySUPERFAMILY54713Elongation factor Ts (EF-Ts), dimerisation domaincoord: 53..116
IPR014039Translation elongation factor EFTs/EF1B, dimerisationPFAMPF00889EF_TScoord: 70..182
e-value: 7.0E-16
score: 58.5
IPR018101Translation elongation factor Ts, conserved sitePROSITEPS01126EF_TS_1coord: 11..26
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 1..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117120contigM-pyrifera_M_contig117120:1..546 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117120.3539.1mRNA_M-pyrifera_M_contig117120.3539.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117120 1..549 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117120.3539.1 ID=prot_M-pyrifera_M_contig117120.3539.1|Name=mRNA_M-pyrifera_M_contig117120.3539.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=182bp
MSISAKDVKALRDATGAGMMDAKKALTECNGDMVAATQLLREKGLAKAAD
RGDRENNEGTIALAADGNTAALVQIKTETDFSAKNEAVTGLAQTLADAVL
ADGPGAIDAAATSIEDLQVTIKENIAVGAVERIEAADGNIVDTYLHVQDG
RGVNAVVVEGSGVSQDDLHQVALHIAFAKPSY
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001816Transl_elong_EFTs/EF1B
IPR036402EF-Ts_dimer_sf
IPR014039Transl_elong_EFTs/EF1B_dimer
IPR018101Transl_elong_Ts_CS
IPR009060UBA-like_sf