prot_M-pyrifera_M_contig117106.3535.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117106.3535.1
Unique Nameprot_M-pyrifera_M_contig117106.3535.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length60
Homology
BLAST of mRNA_M-pyrifera_M_contig117106.3535.1 vs. uniprot
Match: A0A5A8ED65_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8ED65_CAFRO)

HSP 1 Score: 68.9 bits (167), Expect = 3.480e-12
Identity = 28/60 (46.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 GNFETAVSVLDQNADGVVSFPEFTAFHFKYPTVLWPIFDLQDRLQARTLGRGTWNSIARR 60
            G+F+ A+   D +++GV++F EF   + K+P +LWP+F LQDR+Q R+LGR  W  I+RR
Sbjct:  544 GSFKQALRDFDTDSNGVITFDEFVEMNAKFPQLLWPLFQLQDRMQMRSLGRAAWTKISRR 603          
BLAST of mRNA_M-pyrifera_M_contig117106.3535.1 vs. uniprot
Match: A0A5A8CNL8_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CNL8_CAFRO)

HSP 1 Score: 68.9 bits (167), Expect = 3.490e-12
Identity = 28/60 (46.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 GNFETAVSVLDQNADGVVSFPEFTAFHFKYPTVLWPIFDLQDRLQARTLGRGTWNSIARR 60
            G+F+ A+   D +++GV++F EF   + K+P +LWP+F LQDR+Q R+LGR  W  I+RR
Sbjct:  576 GSFKQALRDFDTDSNGVITFDEFVEMNAKFPQLLWPLFQLQDRMQMRSLGRAAWTKISRR 635          
BLAST of mRNA_M-pyrifera_M_contig117106.3535.1 vs. uniprot
Match: A0A6G0X0P8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X0P8_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.730e-7
Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0
Query:    1 GNFETAVSVLDQNADGVVSFPEFTAFHFKYPTVLWPIFDLQDRLQARTLGRGTWNSIARR 60
            GNF  A+   D+  DGV++F  F   + +YP +L+P F LQ+R+Q  TLG   W  I  R
Sbjct:  219 GNFNKALKDFDKKNDGVITFEGFDLLNRRYPMILFPCFQLQERIQRATLGEKHWLRIHER 278          
BLAST of mRNA_M-pyrifera_M_contig117106.3535.1 vs. uniprot
Match: A0A418AZJ2_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AZJ2_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 4.970e-5
Identity = 20/57 (35.09%), Postives = 32/57 (56.14%), Query Frame = 0
Query:    2 NFETAVSVLDQNADGVVSFPEFTAFHFKYPTVLWPIFDLQDRLQARTLGRGTWNSIA 58
            N   A+   D N DG V F EF   + ++PT+L+P++ LQ  ++  ++G   WN  A
Sbjct:   18 NMAAAMDKFDFNGDGKVDFREFQILNQQFPTLLYPVYRLQQSMKVHSMGEAWWNKRA 74          
BLAST of mRNA_M-pyrifera_M_contig117106.3535.1 vs. uniprot
Match: W4FPF5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FPF5_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 7.340e-5
Identity = 20/57 (35.09%), Postives = 32/57 (56.14%), Query Frame = 0
Query:    2 NFETAVSVLDQNADGVVSFPEFTAFHFKYPTVLWPIFDLQDRLQARTLGRGTWNSIA 58
            N   A+   D N DG V F EF   + ++PT+L+P++ LQ  ++  ++G   WN  A
Sbjct:  139 NMAAAMEKFDFNGDGKVDFKEFQILNQQFPTLLYPVYRLQQSMKVHSMGESWWNRRA 195          
BLAST of mRNA_M-pyrifera_M_contig117106.3535.1 vs. uniprot
Match: A0A024TD15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TD15_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 7.360e-5
Identity = 20/57 (35.09%), Postives = 32/57 (56.14%), Query Frame = 0
Query:    2 NFETAVSVLDQNADGVVSFPEFTAFHFKYPTVLWPIFDLQDRLQARTLGRGTWNSIA 58
            N   A+   D N DG V F EF   + ++PT+L+P++ LQ  ++  ++G   WN  A
Sbjct:  147 NMAAAMDKFDFNGDGKVDFREFQILNQQFPTLLYPVYRLQQSMKVHSMGEAWWNKRA 203          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117106.3535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A5A8ED65_CAFRO3.480e-1246.67Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CNL8_CAFRO3.490e-1246.67Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]
A0A6G0X0P8_9STRA4.730e-741.67Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A418AZJ2_9STRA4.970e-535.09EF-hand domain-containing protein n=1 Tax=Aphanomy... [more]
W4FPF5_9STRA7.340e-535.09Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A024TD15_9STRA7.360e-535.09Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 11..23
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 7..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117106contigM-pyrifera_M_contig117106:3..182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117106.3535.1mRNA_M-pyrifera_M_contig117106.3535.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117106 3..182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117106.3535.1 ID=prot_M-pyrifera_M_contig117106.3535.1|Name=mRNA_M-pyrifera_M_contig117106.3535.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=60bp
GNFETAVSVLDQNADGVVSFPEFTAFHFKYPTVLWPIFDLQDRLQARTLG
RGTWNSIARR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair